{"title":"EGCG docked into FAP","caption":"Computational docking into FAP. 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EGCG (NP011), seed 11, pose 1; protein side chains within 5 angstroms are shown as sticks.","coordinate_kind":"docked","coordinate_operations":"No alignment, minimization, or coordinate changes.","evidence_class":"computational-screening-hypothesis","focus_layers":["pocket","ligand_pose"],"height":720,"layers":[{"color":"#17675D","color_mode":"carbon-and-elements","description":"Nearby protein side chains","name":"pocket","object_name":"receptor","representation":"sticks","selection":"(byres ((receptor and polymer.protein) within 5 of ligand)) and not hydro and not (name C+CA+N+O)","transparency":0.0},{"color":"#B98235","color_mode":"carbon-and-elements","description":"EGCG · carbon in ochre; oxygen red","name":"ligand_pose","object_name":"ligand","representation":"sticks","selection":"not hydro","transparency":0.0}],"metadata":{"molecule_id":"NP011","molecule_name":"EGCG","pdb_id":"6Y0F","pose_index":1,"receptor_chain_id":"A","seed":11,"target_name":"FAP"},"projection":"orthographic","schema_version":"surface-atlas-native-molecular-render-recipe/v1","sources":[{"bytes":478232,"chain_namespace":"author","expected_chains":["A"],"object_name":"receptor","path":"data/artifacts/structure-snapshots/22a195feb7180fe77bb88f6e.pdb","role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_type":"polymer","state":1},{"bytes":34191,"chain_namespace":"author","expected_chains":[],"object_name":"ligand","path":"data/artifacts/structure-snapshots/c58d346db2451d78a23ba1f6.sdf","role":"pose-ensemble-sdf","sha256":"c58d346db2451d78a23ba1f614bb8f1abd1db8376b8c36aa83a7521b99ca914c","source_type":"pose-ensemble","state":1}],"target_chains":null,"title":"EGCG docked into FAP","view_settings":{"ambient":0.65,"antialias":2,"cif_use_auth":1,"max_threads":1,"ray_opaque_background":1,"ray_shadows":0},"width":960,"zoom_buffer":1.5},"replay_instructions":"Save replay_recipe as a JSON draft. Use the report directory as the artifact root when locking and rendering with render_molecular_snapshot.py."}
