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EGCG (NP011), seed 11, pose 1; protein side chains within 5 angstroms are shown as sticks.","coordinate_kind":"docked","coordinate_operations":"No alignment, minimization, or coordinate changes.","evidence_class":"computational-screening-hypothesis","focus_layers":["pocket","ligand_pose"],"height":720,"layers":[{"color":"#17675D","color_mode":"carbon-and-elements","description":"Nearby protein side chains","name":"pocket","object_name":"receptor","representation":"sticks","selection":"(byres ((receptor and polymer.protein) within 5 of ligand)) and not hydro and not (name C+CA+N+O)","transparency":0.0},{"color":"#B98235","color_mode":"carbon-and-elements","description":"EGCG · carbon in ochre; oxygen red","name":"ligand_pose","object_name":"ligand","representation":"sticks","selection":"not hydro","transparency":0.0}],"metadata":{"molecule_id":"NP011","molecule_name":"EGCG","pdb_id":"9R0G","pose_index":1,"receptor_chain_id":"B","seed":11,"target_name":"NT5E"},"projection":"orthographic","schema_version":"surface-atlas-native-molecular-render-recipe/v1","sources":[{"bytes":334538,"chain_namespace":"author","expected_chains":["B"],"object_name":"receptor","path":"data/artifacts/structure-snapshots/78bdc047d1ff92dd85ff3003.pdb","role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_type":"polymer","state":1},{"bytes":34191,"chain_namespace":"author","expected_chains":[],"object_name":"ligand","path":"data/artifacts/structure-snapshots/c960a437ff8350495a89c002.sdf","role":"pose-ensemble-sdf","sha256":"c960a437ff8350495a89c00272e1cf65471e647898392b0282f5a83518fc2610","source_type":"pose-ensemble","state":1}],"target_chains":null,"title":"EGCG docked into NT5E","view_settings":{"ambient":0.65,"antialias":2,"cif_use_auth":1,"max_threads":1,"ray_opaque_background":1,"ray_shadows":0},"width":960,"zoom_buffer":1.5},"replay_instructions":"Save replay_recipe as a JSON draft. Use the report directory as the artifact root when locking and rendering with render_molecular_snapshot.py."}
