{"atlas_id":"pmmr-mucinous-colon","claim_ceiling":"public-cohort transcript-expression overlay using an MSS proxy; it does not establish patient-specific surface abundance, pMMR status, protein abundance, therapeutic index, or post-treatment persistence","cohort_contract":{"left_colorectal_site_proxy":{"codes":["C18.5","C18.6","C18.7","C19.9"],"field":"ICD_O_3_SITE","meaning":"splenic flexure, descending colon, sigmoid colon, or rectosigmoid code"},"minimum_ranking_cohort_size":10,"mss_proxy":{"definition":"MANTIS score <0.4 when present; otherwise MSIsensor score <10","meaning":"public-cohort MSS proxy; not a patient-level pMMR measurement","method_counts":{"MSI_SCORE_MANTIS<0.4":448,"MSI_SENSOR_SCORE<10":29}},"mucinous":{"exact_value":"Mucinous Adenocarcinoma of the Colon and Rectum","field":"CANCER_TYPE_DETAILED"},"sample_counts":{"joint_mss_proxy_mucinous_left":2,"mss_proxy_left_colorectal":92,"mss_proxy_mucinous":37,"mss_proxy_nonmucinous":440,"mss_proxy_other_site":385}},"counts":{"atlas_targets":185,"expression_measurements":107566,"mapped_targets":184,"unresolved_targets":1},"created_at":"2026-09-04","records":[{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":7,"mucinous_within_mss_proxy_log2_median_ratio":157},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":50501.22,"q25_rsem":29221.03,"q75_rsem":71781.41,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":35576.8,"q25_rsem":19972.3169,"q75_rsem":52880.375,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":24184.2553,"q25_rsem":11975.6,"q75_rsem":54167.9,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":29668.27465,"q25_rsem":16774.65,"q75_rsem":52530.122675,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":27495.7,"q25_rsem":15331.3,"q75_rsem":52705.8,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.371719,"mucinous_within_mss_proxy_log2_median_ratio":-0.294842},"entrez_gene_id":4680,"gene_symbol":"CEACAM6","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000086548"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":62,"mucinous_within_mss_proxy_log2_median_ratio":141},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":20220.7,"q25_rsem":19583.85,"q75_rsem":20857.55,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":25125.59475,"q25_rsem":19315.075,"q75_rsem":30694.875,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":22443.3365,"q25_rsem":18909.2,"q75_rsem":30021.2,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":25010.3342,"q25_rsem":19893.4,"q75_rsem":29954.8664,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":24846.1,"q25_rsem":19884.6,"q75_rsem":29619.97,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.016138,"mucinous_within_mss_proxy_log2_median_ratio":-0.156231},"entrez_gene_id":4072,"gene_symbol":"EPCAM","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000119888"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":40,"mucinous_within_mss_proxy_log2_median_ratio":88},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":7706.495,"q25_rsem":6120.1425,"q75_rsem":9292.8475,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":7318.595,"q25_rsem":5058.5725,"q75_rsem":9040.19,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":8040.87,"q25_rsem":5840.0,"q75_rsem":9907.0525,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":6922.8144,"q25_rsem":5003.01575,"q75_rsem":9630.4575,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":6908.13,"q25_rsem":5016.2417,"q75_rsem":9708.19,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.08326,"mucinous_within_mss_proxy_log2_median_ratio":0.215964},"entrez_gene_id":1365,"gene_symbol":"CLDN3","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000165215"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":99,"mucinous_within_mss_proxy_log2_median_ratio":59},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":6292.335,"q25_rsem":5121.5575,"q75_rsem":7463.1125,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":6504.651,"q25_rsem":4616.605,"q75_rsem":8777.368675,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":8733.4512,"q25_rsem":6878.8537,"q75_rsem":10633.3,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":6690.23715,"q25_rsem":4978.653,"q75_rsem":8619.389975,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":6830.73,"q25_rsem":5201.8213,"q75_rsem":8792.32,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.070558,"mucinous_within_mss_proxy_log2_median_ratio":0.384444},"entrez_gene_id":1366,"gene_symbol":"CLDN7","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000181885"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":59,"mucinous_within_mss_proxy_log2_median_ratio":135},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":95309.2,"q25_rsem":71392.3,"q75_rsem":119226.1,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":118966.8499,"q25_rsem":91595.4,"q75_rsem":166728.871075,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":111126.0,"q25_rsem":62236.8,"q75_rsem":175766.9301,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":117586.5659,"q25_rsem":82402.85,"q75_rsem":165639.0,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":116446.0,"q25_rsem":79311.4,"q75_rsem":165739.0,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.030898,"mucinous_within_mss_proxy_log2_median_ratio":-0.081526},"entrez_gene_id":1048,"gene_symbol":"CEACAM5","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000105388"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":123,"mucinous_within_mss_proxy_log2_median_ratio":25},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":27535.0,"q25_rsem":24573.2,"q75_rsem":30496.8,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":12323.5,"q25_rsem":8900.8938,"q75_rsem":17243.875,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":20565.9983,"q25_rsem":14077.8,"q75_rsem":25869.4615,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":12552.25,"q25_rsem":8293.3475,"q75_rsem":17507.625,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":13305.0862,"q25_rsem":8391.83,"q75_rsem":18617.2446,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.110557,"mucinous_within_mss_proxy_log2_median_ratio":0.71227},"entrez_gene_id":7103,"gene_symbol":"TSPAN8","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000127324"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":33,"mucinous_within_mss_proxy_log2_median_ratio":116},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":15089.615,"q25_rsem":11319.1225,"q75_rsem":18860.1075,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":18045.5,"q25_rsem":14096.232725,"q75_rsem":23835.71755,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":17741.6,"q25_rsem":12102.5,"q75_rsem":24753.4,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":16999.1,"q25_rsem":13114.014225,"q75_rsem":24211.9,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":16837.4,"q25_rsem":12879.5957,"q75_rsem":24407.9,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.099964,"mucinous_within_mss_proxy_log2_median_ratio":0.061674},"entrez_gene_id":1364,"gene_symbol":"CLDN4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000189143"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":109,"mucinous_within_mss_proxy_log2_median_ratio":146},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":6923.5,"q25_rsem":5217.65,"q75_rsem":8629.35,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":13635.2462,"q25_rsem":10406.675,"q75_rsem":17384.425,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":12812.8062,"q25_rsem":9999.3391,"q75_rsem":14545.9,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":14482.2,"q25_rsem":11539.251375,"q75_rsem":17694.0,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":14432.4674,"q25_rsem":11626.7,"q75_rsem":17567.1454,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.081971,"mucinous_within_mss_proxy_log2_median_ratio":-0.176681},"entrez_gene_id":999,"gene_symbol":"CDH1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000039068"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":14,"mucinous_within_mss_proxy_log2_median_ratio":99},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":11795.11,"q25_rsem":8057.515,"q75_rsem":15532.705,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":13244.15,"q25_rsem":9228.68895,"q75_rsem":16370.726225,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":12911.7561,"q25_rsem":8573.25,"q75_rsem":18069.0961,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":11494.63715,"q25_rsem":8604.771525,"q75_rsem":15911.625,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":11265.0,"q25_rsem":8416.8308,"q75_rsem":16026.2131,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.233489,"mucinous_within_mss_proxy_log2_median_ratio":0.167711},"entrez_gene_id":56667,"gene_symbol":"MUC13","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000173702"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":142,"mucinous_within_mss_proxy_log2_median_ratio":143},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":4803.93,"q25_rsem":4353.035,"q75_rsem":5254.825,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":4539.3855,"q25_rsem":3635.140875,"q75_rsem":6605.3796,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":4511.22,"q25_rsem":2701.39,"q75_rsem":5758.82,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":5066.3084,"q25_rsem":3523.7332,"q75_rsem":7228.26175,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":5084.24,"q25_rsem":3434.16,"q75_rsem":7235.669,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.163501,"mucinous_within_mss_proxy_log2_median_ratio":-0.167382},"entrez_gene_id":2048,"gene_symbol":"EPHB2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000133216"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":110,"mucinous_within_mss_proxy_log2_median_ratio":144},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":8982.4,"q25_rsem":7719.6,"q75_rsem":10245.2,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":12747.25,"q25_rsem":9276.990225,"q75_rsem":16086.525,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":12117.2114,"q25_rsem":9800.45,"q75_rsem":15249.7,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":13609.7,"q25_rsem":10536.540325,"q75_rsem":16587.872025,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":13580.0,"q25_rsem":10600.5,"q75_rsem":16566.7881,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.09129,"mucinous_within_mss_proxy_log2_median_ratio":-0.167564},"entrez_gene_id":6768,"gene_symbol":"ST14","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000149418"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":36,"mucinous_within_mss_proxy_log2_median_ratio":172},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":5246.455,"q25_rsem":4204.5375,"q75_rsem":6288.3725,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":7033.195,"q25_rsem":4466.7952,"q75_rsem":9315.940225,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":4272.7256,"q25_rsem":3162.62,"q75_rsem":7155.5,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":6828.36,"q25_rsem":5035.0725,"q75_rsem":9189.42405,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":6606.21,"q25_rsem":4800.94,"q75_rsem":8862.7034,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.090344,"mucinous_within_mss_proxy_log2_median_ratio":-0.676256},"entrez_gene_id":54894,"gene_symbol":"RNF43","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000108375"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":166,"mucinous_within_mss_proxy_log2_median_ratio":13},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":5026.115,"q25_rsem":4780.2625,"q75_rsem":5271.9675,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1708.8976,"q25_rsem":650.66875,"q75_rsem":4510.564525,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":4186.3902,"q25_rsem":2089.15,"q75_rsem":7562.983,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1911.20415,"q25_rsem":951.05325,"q75_rsem":4323.9814,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2100.8722,"q25_rsem":1041.1,"q75_rsem":4521.25,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.297765,"mucinous_within_mss_proxy_log2_median_ratio":1.130815},"entrez_gene_id":4582,"gene_symbol":"MUC1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000185499"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":63,"mucinous_within_mss_proxy_log2_median_ratio":145},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":13671.65,"q25_rsem":12029.325,"q75_rsem":15313.975,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":13218.41755,"q25_rsem":9766.18,"q75_rsem":16926.08785,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":11617.2628,"q25_rsem":8180.18,"q75_rsem":16853.6,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":13114.8787,"q25_rsem":9313.195,"q75_rsem":16825.677475,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":13072.8,"q25_rsem":9184.4,"q75_rsem":16796.3557,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.01598,"mucinous_within_mss_proxy_log2_median_ratio":-0.17492},"entrez_gene_id":1015,"gene_symbol":"CDH17","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000079112"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":82,"mucinous_within_mss_proxy_log2_median_ratio":104},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":4964.18,"q25_rsem":4739.635,"q75_rsem":5188.725,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":4198.825,"q25_rsem":2340.724325,"q75_rsem":6217.2875,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":4585.06,"q25_rsem":2672.0917,"q75_rsem":8653.8079,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":4215.29765,"q25_rsem":2495.0467,"q75_rsem":6576.09995,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":4292.56,"q25_rsem":2568.9719,"q75_rsem":6793.8079,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.031845,"mucinous_within_mss_proxy_log2_median_ratio":0.121279},"entrez_gene_id":10223,"gene_symbol":"GPA33","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000143167"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":44,"mucinous_within_mss_proxy_log2_median_ratio":107},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":552.54,"q25_rsem":510.411,"q75_rsem":594.669,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":554.823,"q25_rsem":404.08595,"q75_rsem":777.09725,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":570.972,"q25_rsem":405.9933,"q75_rsem":743.0474,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":531.4235,"q25_rsem":396.387925,"q75_rsem":763.33935,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":531.679,"q25_rsem":398.0764,"q75_rsem":763.049,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.061359,"mucinous_within_mss_proxy_log2_median_ratio":0.10337},"entrez_gene_id":1956,"gene_symbol":"EGFR","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000146648"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":73,"mucinous_within_mss_proxy_log2_median_ratio":117},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":5215.62,"q25_rsem":3747.025,"q75_rsem":6684.215,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":4738.42635,"q25_rsem":3572.874175,"q75_rsem":6036.74,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":4937.7938,"q25_rsem":3853.94,"q75_rsem":6519.32,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":4742.87905,"q25_rsem":3672.306175,"q75_rsem":6112.99,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":4774.53,"q25_rsem":3747.5384,"q75_rsem":6131.02,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.010948,"mucinous_within_mss_proxy_log2_median_ratio":0.058092},"entrez_gene_id":2064,"gene_symbol":"ERBB2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000141736"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":39,"mucinous_within_mss_proxy_log2_median_ratio":140},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":5972.88,"q25_rsem":4764.475,"q75_rsem":7181.285,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":7030.98,"q25_rsem":5023.191525,"q75_rsem":9136.8325,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":6202.8796,"q25_rsem":5136.2687,"q75_rsem":7689.5,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":6741.94065,"q25_rsem":5437.128475,"q75_rsem":8249.1125,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":6626.88,"q25_rsem":5422.74,"q75_rsem":8123.1299,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.085383,"mucinous_within_mss_proxy_log2_median_ratio":-0.120207},"entrez_gene_id":2065,"gene_symbol":"ERBB3","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000065361"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":175,"mucinous_within_mss_proxy_log2_median_ratio":17},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":7042.2425,"q25_rsem":3701.01375,"q75_rsem":10383.47125,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":424.3225,"q25_rsem":159.876625,"q75_rsem":1922.052175,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1104.6501,"q25_rsem":184.5,"q75_rsem":3923.0917,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":546.4204,"q25_rsem":157.61675,"q75_rsem":1584.315,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":586.35,"q25_rsem":157.149,"q75_rsem":1598.1389,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.465663,"mucinous_within_mss_proxy_log2_median_ratio":1.014174},"entrez_gene_id":10232,"gene_symbol":"MSLN","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000102854"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":46,"mucinous_within_mss_proxy_log2_median_ratio":167},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":831.147,"q25_rsem":579.5655,"q75_rsem":1082.7285,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2157.87,"q25_rsem":1336.6501,"q75_rsem":3154.565425,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1489.1752,"q25_rsem":1051.1878,"q75_rsem":2123.21,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2172.028,"q25_rsem":1339.3051,"q75_rsem":3088.8875,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2079.83,"q25_rsem":1294.61,"q75_rsem":3034.86,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.053117,"mucinous_within_mss_proxy_log2_median_ratio":-0.544225},"entrez_gene_id":9076,"gene_symbol":"CLDN1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000163347"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":37,"mucinous_within_mss_proxy_log2_median_ratio":151},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2422.355,"q25_rsem":1943.5325,"q75_rsem":2901.1775,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":4172.61,"q25_rsem":2770.005,"q75_rsem":7058.385,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":3462.5402,"q25_rsem":2707.93,"q75_rsem":6683.31,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":3999.2124,"q25_rsem":2486.69215,"q75_rsem":6796.472775,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":3925.59,"q25_rsem":2513.46,"q75_rsem":6764.7739,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.088019,"mucinous_within_mss_proxy_log2_median_ratio":-0.207829},"entrez_gene_id":6513,"gene_symbol":"SLC2A1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000117394"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":97,"mucinous_within_mss_proxy_log2_median_ratio":108},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":321.548,"q25_rsem":297.1295,"q75_rsem":345.9665,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":213.1575,"q25_rsem":173.962975,"q75_rsem":282.106925,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":235.996,"q25_rsem":196.6097,"q75_rsem":291.287,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":220.00945,"q25_rsem":173.768275,"q75_rsem":284.098,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":223.801,"q25_rsem":174.53,"q75_rsem":284.928,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.069976,"mucinous_within_mss_proxy_log2_median_ratio":0.100755},"entrez_gene_id":3682,"gene_symbol":"ITGAE","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000083457"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":119,"mucinous_within_mss_proxy_log2_median_ratio":150},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3100.625,"q25_rsem":2917.4325,"q75_rsem":3283.8175,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":3189.889,"q25_rsem":2516.3161,"q75_rsem":4560.435,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2979.9478,"q25_rsem":2301.67,"q75_rsem":4434.573,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":3431.13,"q25_rsem":2679.565575,"q75_rsem":4622.8975,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":3438.71,"q25_rsem":2678.43,"q75_rsem":4594.0218,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.108329,"mucinous_within_mss_proxy_log2_median_ratio":-0.203333},"entrez_gene_id":4233,"gene_symbol":"MET","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000105976"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":115,"mucinous_within_mss_proxy_log2_median_ratio":31},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":8315.06,"q25_rsem":7136.64,"q75_rsem":9493.48,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":8494.65325,"q25_rsem":5661.39,"q75_rsem":12071.225,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":13175.1548,"q25_rsem":9342.6553,"q75_rsem":17375.0,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":8547.23525,"q25_rsem":5597.28,"q75_rsem":12928.365725,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":9110.8131,"q25_rsem":5945.15,"q75_rsem":13557.4987,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.101013,"mucinous_within_mss_proxy_log2_median_ratio":0.624231},"entrez_gene_id":481,"gene_symbol":"ATP1B1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000143153"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":152,"mucinous_within_mss_proxy_log2_median_ratio":131},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":31647.85,"q25_rsem":25169.425,"q75_rsem":38126.275,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":29848.4,"q25_rsem":22736.4973,"q75_rsem":45592.063125,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":32383.0,"q25_rsem":21050.4234,"q75_rsem":45760.7,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":33241.83575,"q25_rsem":22736.4973,"q75_rsem":46767.65,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":33855.9,"q25_rsem":22701.8,"q75_rsem":47010.6,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.181748,"mucinous_within_mss_proxy_log2_median_ratio":-0.037762},"entrez_gene_id":3106,"gene_symbol":"HLA-B","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000234745"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":53,"mucinous_within_mss_proxy_log2_median_ratio":12},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":6129.295,"q25_rsem":4164.8925,"q75_rsem":8093.6975,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2150.1721,"q25_rsem":1559.6175,"q75_rsem":3539.7875,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":4664.9,"q25_rsem":2592.8365,"q75_rsem":6159.88,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1995.745,"q25_rsem":1334.25865,"q75_rsem":3210.05,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2087.119,"q25_rsem":1351.0,"q75_rsem":3434.3942,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.042919,"mucinous_within_mss_proxy_log2_median_ratio":1.224505},"entrez_gene_id":1604,"gene_symbol":"CD55","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000196352"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":128,"mucinous_within_mss_proxy_log2_median_ratio":70},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":19620.05,"q25_rsem":17186.225,"q75_rsem":22053.875,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":14304.6632,"q25_rsem":10922.33665,"q75_rsem":17775.475,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":18455.9156,"q25_rsem":15114.2,"q75_rsem":21044.5108,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":14944.524,"q25_rsem":12109.439625,"q75_rsem":18823.2,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":15616.4224,"q25_rsem":12649.8603,"q75_rsem":19725.0237,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.12657,"mucinous_within_mss_proxy_log2_median_ratio":0.304448},"entrez_gene_id":682,"gene_symbol":"BSG","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000172270"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":125,"mucinous_within_mss_proxy_log2_median_ratio":95},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":34382.39,"q25_rsem":19984.835,"q75_rsem":48779.945,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":13639.61515,"q25_rsem":8143.858325,"q75_rsem":21716.534225,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":16562.309,"q25_rsem":9282.5162,"q75_rsem":24308.631,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":14616.0327,"q25_rsem":8258.0775,"q75_rsem":23363.4504,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":14801.4031,"q25_rsem":8556.57,"q75_rsem":23989.3484,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.117923,"mucinous_within_mss_proxy_log2_median_ratio":0.18034},"entrez_gene_id":972,"gene_symbol":"CD74","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000019582"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":75,"mucinous_within_mss_proxy_log2_median_ratio":92},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":4686.635,"q25_rsem":3702.9575,"q75_rsem":5670.3125,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":6495.55875,"q25_rsem":5488.1957,"q75_rsem":7993.0025,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":7366.98,"q25_rsem":5882.96,"q75_rsem":9121.7271,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":6466.35005,"q25_rsem":5375.17995,"q75_rsem":8222.630175,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":6561.84,"q25_rsem":5370.18,"q75_rsem":8264.368,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.014645,"mucinous_within_mss_proxy_log2_median_ratio":0.188094},"entrez_gene_id":780,"gene_symbol":"DDR1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000204580"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":93,"mucinous_within_mss_proxy_log2_median_ratio":162},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2856.04,"q25_rsem":2601.115,"q75_rsem":3110.965,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":3623.58,"q25_rsem":2891.18055,"q75_rsem":4409.099175,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2967.19,"q25_rsem":2368.7373,"q75_rsem":3526.67,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":3855.3174,"q25_rsem":3073.162925,"q75_rsem":4850.1068,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":3795.83,"q25_rsem":3052.6562,"q75_rsem":4863.7824,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.066982,"mucinous_within_mss_proxy_log2_median_ratio":-0.37764},"entrez_gene_id":6520,"gene_symbol":"SLC3A2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000168003"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":157,"mucinous_within_mss_proxy_log2_median_ratio":33},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1066.2295,"q25_rsem":973.61925,"q75_rsem":1158.83975,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":874.7293,"q25_rsem":366.470125,"q75_rsem":1693.2634,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1403.89,"q25_rsem":992.733,"q75_rsem":2015.27,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":926.9295,"q25_rsem":482.0814,"q75_rsem":1667.675,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1016.64,"q25_rsem":572.859,"q75_rsem":1718.94,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.21667,"mucinous_within_mss_proxy_log2_median_ratio":0.59837},"entrez_gene_id":4907,"gene_symbol":"NT5E","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000135318"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":104,"mucinous_within_mss_proxy_log2_median_ratio":82},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":7812.73,"q25_rsem":7652.93,"q75_rsem":7972.53,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":6499.6012,"q25_rsem":5158.25835,"q75_rsem":8635.8893,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":7912.08,"q25_rsem":6484.4108,"q75_rsem":9090.31,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":6726.60765,"q25_rsem":5266.68415,"q75_rsem":8721.9,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":6850.2471,"q25_rsem":5423.9,"q75_rsem":8808.841,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.075793,"mucinous_within_mss_proxy_log2_median_ratio":0.234146},"entrez_gene_id":960,"gene_symbol":"CD44","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000026508"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":141,"mucinous_within_mss_proxy_log2_median_ratio":6},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":4225.36,"q25_rsem":3376.605,"q75_rsem":5074.115,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":223.70785,"q25_rsem":111.709925,"q75_rsem":1291.6225,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":727.7794,"q25_rsem":248.7896,"q75_rsem":2527.85,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":224.5883,"q25_rsem":107.970775,"q75_rsem":683.050075,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":248.7896,"q25_rsem":110.0946,"q75_rsem":727.7794,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.152663,"mucinous_within_mss_proxy_log2_median_ratio":1.69179},"entrez_gene_id":4070,"gene_symbol":"TACSTD2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000184292"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":145,"mucinous_within_mss_proxy_log2_median_ratio":74},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1034.432,"q25_rsem":771.283,"q75_rsem":1297.581,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":880.6925,"q25_rsem":651.7976,"q75_rsem":1193.335,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1161.9973,"q25_rsem":729.07,"q75_rsem":1560.73,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":961.11575,"q25_rsem":665.5895,"q75_rsem":1265.2579,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":988.92,"q25_rsem":689.102,"q75_rsem":1322.15,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.167036,"mucinous_within_mss_proxy_log2_median_ratio":0.273565},"entrez_gene_id":3732,"gene_symbol":"CD82","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000085117"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":35,"mucinous_within_mss_proxy_log2_median_ratio":123},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":531.405,"q25_rsem":332.11,"q75_rsem":730.7,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":639.08345,"q25_rsem":475.985575,"q75_rsem":823.707,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":627.3017,"q25_rsem":439.5,"q75_rsem":810.098,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":610.0645,"q25_rsem":441.205725,"q75_rsem":820.76015,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":598.999,"q25_rsem":432.483,"q75_rsem":815.009,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.0933,"mucinous_within_mss_proxy_log2_median_ratio":0.040133},"entrez_gene_id":3694,"gene_symbol":"ITGB6","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000115221"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":23,"mucinous_within_mss_proxy_log2_median_ratio":129},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.5,"expected_sample_count":2,"median_rsem":0.9353,"q25_rsem":0.46765,"q75_rsem":1.40295,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.6,"expected_sample_count":92,"median_rsem":0.50695,"q25_rsem":0.0,"q75_rsem":1.47055,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.567568,"expected_sample_count":37,"median_rsem":0.3647,"q25_rsem":0.0,"q75_rsem":1.8706,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.534247,"expected_sample_count":440,"median_rsem":0.3923,"q25_rsem":0.0,"q75_rsem":1.33795,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.522078,"expected_sample_count":385,"median_rsem":0.3504,"q25_rsem":0.0,"q75_rsem":1.3499,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.158245,"mucinous_within_mss_proxy_log2_median_ratio":-0.028886},"entrez_gene_id":238,"gene_symbol":"ALK","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000171094"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":113,"mucinous_within_mss_proxy_log2_median_ratio":158},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2187.21,"q25_rsem":2186.68,"q75_rsem":2187.74,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2657.945,"q25_rsem":1993.501675,"q75_rsem":3610.67915,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2267.2868,"q25_rsem":1839.19,"q75_rsem":3176.5549,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2846.75395,"q25_rsem":2104.525,"q75_rsem":3739.73,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2847.58,"q25_rsem":2124.37,"q75_rsem":3761.0228,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.099389,"mucinous_within_mss_proxy_log2_median_ratio":-0.328221},"entrez_gene_id":4851,"gene_symbol":"NOTCH1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000148400"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":47,"mucinous_within_mss_proxy_log2_median_ratio":106},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2091.446,"q25_rsem":1353.524,"q75_rsem":2829.368,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":876.87415,"q25_rsem":667.03165,"q75_rsem":1106.673225,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":911.6994,"q25_rsem":727.384,"q75_rsem":1299.7024,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":847.2965,"q25_rsem":658.954075,"q75_rsem":1086.997575,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":846.234,"q25_rsem":662.791,"q75_rsem":1107.6184,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.051254,"mucinous_within_mss_proxy_log2_median_ratio":0.105571},"entrez_gene_id":953,"gene_symbol":"ENTPD1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000138185"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":124,"mucinous_within_mss_proxy_log2_median_ratio":161},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3241.735,"q25_rsem":3163.8275,"q75_rsem":3319.6425,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":3614.99175,"q25_rsem":2440.125175,"q75_rsem":5252.737375,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":3079.5377,"q25_rsem":2062.5461,"q75_rsem":3835.1736,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":3954.19465,"q25_rsem":2747.685375,"q75_rsem":5930.645,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":3920.6643,"q25_rsem":2757.0244,"q75_rsem":6058.32,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.117075,"mucinous_within_mss_proxy_log2_median_ratio":-0.360567},"entrez_gene_id":8140,"gene_symbol":"SLC7A5","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000103257"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":134,"mucinous_within_mss_proxy_log2_median_ratio":66},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":391.76945,"q25_rsem":201.368175,"q75_rsem":582.170725,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":102.767,"q25_rsem":60.53815,"q75_rsem":181.442725,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":137.8249,"q25_rsem":66.9087,"q75_rsem":256.858,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":109.994,"q25_rsem":59.75575,"q75_rsem":196.57755,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":112.992,"q25_rsem":61.2648,"q75_rsem":204.397,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.135585,"mucinous_within_mss_proxy_log2_median_ratio":0.322785},"entrez_gene_id":84868,"gene_symbol":"HAVCR2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000135077"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":159,"mucinous_within_mss_proxy_log2_median_ratio":130},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.5,"expected_sample_count":2,"median_rsem":0.9353,"q25_rsem":0.46765,"q75_rsem":1.40295,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.8,"expected_sample_count":92,"median_rsem":1.57795,"q25_rsem":0.51945,"q75_rsem":3.874825,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.837838,"expected_sample_count":37,"median_rsem":1.8706,"q25_rsem":0.5187,"q75_rsem":6.8075,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.828767,"expected_sample_count":440,"median_rsem":1.92965,"q25_rsem":0.623725,"q75_rsem":4.0924,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.836364,"expected_sample_count":385,"median_rsem":2.0311,"q25_rsem":0.6158,"q75_rsem":4.2321,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.233617,"mucinous_within_mss_proxy_log2_median_ratio":-0.029376},"entrez_gene_id":10803,"gene_symbol":"CCR9","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000173585"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":117,"mucinous_within_mss_proxy_log2_median_ratio":23},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3579.305,"q25_rsem":2860.7525,"q75_rsem":4297.8575,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2236.48855,"q25_rsem":1810.53,"q75_rsem":3136.025,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":4026.27,"q25_rsem":2692.54,"q75_rsem":5056.5,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2305.5339,"q25_rsem":1751.7825,"q75_rsem":3102.7675,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2407.7189,"q25_rsem":1796.7425,"q75_rsem":3251.0803,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.106386,"mucinous_within_mss_proxy_log2_median_ratio":0.804076},"entrez_gene_id":10970,"gene_symbol":"CKAP4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000136026"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":95,"mucinous_within_mss_proxy_log2_median_ratio":50},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3700.435,"q25_rsem":3606.7525,"q75_rsem":3794.1175,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2584.11135,"q25_rsem":1822.4157,"q75_rsem":3588.021325,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":3513.07,"q25_rsem":3002.1478,"q75_rsem":4402.91,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2613.44075,"q25_rsem":1851.4525,"q75_rsem":3549.27,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2710.51,"q25_rsem":1930.1201,"q75_rsem":3621.6198,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.06887,"mucinous_within_mss_proxy_log2_median_ratio":0.426641},"entrez_gene_id":23670,"gene_symbol":"CEMIP2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000135048"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":151,"mucinous_within_mss_proxy_log2_median_ratio":54},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3736.665,"q25_rsem":2568.0225,"q75_rsem":4905.3075,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2031.8498,"q25_rsem":1380.5625,"q75_rsem":3186.034725,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2955.1494,"q25_rsem":1741.5,"q75_rsem":4076.9902,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2217.47425,"q25_rsem":1505.87845,"q75_rsem":3273.303775,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2297.9,"q25_rsem":1557.83,"q75_rsem":3361.0718,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.17744,"mucinous_within_mss_proxy_log2_median_ratio":0.414151},"entrez_gene_id":968,"gene_symbol":"CD68","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000129226"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":51,"mucinous_within_mss_proxy_log2_median_ratio":78},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3474.325,"q25_rsem":2980.4475,"q75_rsem":3968.2025,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":3062.06,"q25_rsem":2415.75,"q75_rsem":3844.5175,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":3478.15,"q25_rsem":2623.132,"q75_rsem":4285.1841,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2921.06475,"q25_rsem":2298.362075,"q75_rsem":3792.1225,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2969.73,"q25_rsem":2300.4683,"q75_rsem":3826.15,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.044156,"mucinous_within_mss_proxy_log2_median_ratio":0.251747},"entrez_gene_id":7048,"gene_symbol":"TGFBR2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000163513"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":32,"mucinous_within_mss_proxy_log2_median_ratio":128},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3184.325,"q25_rsem":2326.5825,"q75_rsem":4042.0675,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2688.72,"q25_rsem":2075.055475,"q75_rsem":3429.76,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2499.9266,"q25_rsem":2063.9,"q75_rsem":3336.5616,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2545.3593,"q25_rsem":2002.0624,"q75_rsem":3235.7775,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2505.93,"q25_rsem":1997.598,"q75_rsem":3206.3348,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.101534,"mucinous_within_mss_proxy_log2_median_ratio":-0.025973},"entrez_gene_id":3693,"gene_symbol":"ITGB5","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000082781"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":112,"mucinous_within_mss_proxy_log2_median_ratio":75},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":7601.685,"q25_rsem":6833.1925,"q75_rsem":8370.1775,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":8310.77475,"q25_rsem":6483.22615,"q75_rsem":11053.16425,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":10513.6721,"q25_rsem":7699.2559,"q75_rsem":12837.3797,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":8713.8589,"q25_rsem":6515.50595,"q75_rsem":11522.475,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":8880.7703,"q25_rsem":6564.6304,"q75_rsem":11827.4,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.095691,"mucinous_within_mss_proxy_log2_median_ratio":0.270855},"entrez_gene_id":3133,"gene_symbol":"HLA-E","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000204592"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":65,"mucinous_within_mss_proxy_log2_median_ratio":77},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3653.43,"q25_rsem":2496.795,"q75_rsem":4810.065,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2058.65,"q25_rsem":1462.89805,"q75_rsem":2735.1782,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2410.6414,"q25_rsem":1775.685,"q75_rsem":3111.7,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2018.19275,"q25_rsem":1432.84645,"q75_rsem":2812.560525,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2041.5656,"q25_rsem":1441.9258,"q75_rsem":2864.6823,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.012017,"mucinous_within_mss_proxy_log2_median_ratio":0.256237},"entrez_gene_id":3685,"gene_symbol":"ITGAV","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000138448"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":15,"mucinous_within_mss_proxy_log2_median_ratio":119},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":16.7501,"q25_rsem":12.0307,"q75_rsem":21.4695,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.988889,"expected_sample_count":92,"median_rsem":13.87985,"q25_rsem":7.078775,"q75_rsem":31.554875,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.945946,"expected_sample_count":37,"median_rsem":12.3647,"q25_rsem":6.0285,"q75_rsem":20.4574,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.984018,"expected_sample_count":440,"median_rsem":11.88175,"q25_rsem":5.385675,"q75_rsem":25.127175,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.979221,"expected_sample_count":385,"median_rsem":11.6995,"q25_rsem":4.9507,"q75_rsem":24.1072,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.228588,"mucinous_within_mss_proxy_log2_median_ratio":0.053099},"entrez_gene_id":3084,"gene_symbol":"NRG1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000157168"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":79,"mucinous_within_mss_proxy_log2_median_ratio":60},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1184.0775,"q25_rsem":668.07625,"q75_rsem":1700.07875,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":855.4671,"q25_rsem":561.488675,"q75_rsem":1261.32085,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1108.24,"q25_rsem":677.028,"q75_rsem":1484.93,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":856.3333,"q25_rsem":599.659625,"q75_rsem":1249.5569,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":869.526,"q25_rsem":606.344,"q75_rsem":1254.4291,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.02349,"mucinous_within_mss_proxy_log2_median_ratio":0.371643},"entrez_gene_id":3672,"gene_symbol":"ITGA1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000213949"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":56,"mucinous_within_mss_proxy_log2_median_ratio":67},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3232.3,"q25_rsem":2187.16,"q75_rsem":4277.44,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1876.08,"q25_rsem":1497.93,"q75_rsem":2397.355175,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2269.1378,"q25_rsem":1780.18,"q75_rsem":2487.02,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1823.27,"q25_rsem":1396.91,"q75_rsem":2354.8775,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1824.86,"q25_rsem":1418.39,"q75_rsem":2386.15,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.039914,"mucinous_within_mss_proxy_log2_median_ratio":0.315461},"entrez_gene_id":80381,"gene_symbol":"CD276","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000103855"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":81,"mucinous_within_mss_proxy_log2_median_ratio":32},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":970.4402,"q25_rsem":495.0903,"q75_rsem":1445.7901,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":145.5734,"q25_rsem":66.972925,"q75_rsem":229.577325,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":217.765,"q25_rsem":68.6427,"q75_rsem":415.533,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.997717,"expected_sample_count":440,"median_rsem":142.9969,"q25_rsem":57.519575,"q75_rsem":263.1907,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.997403,"expected_sample_count":385,"median_rsem":148.7608,"q25_rsem":55.5062,"q75_rsem":288.32,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.031037,"mucinous_within_mss_proxy_log2_median_ratio":0.603344},"entrez_gene_id":4360,"gene_symbol":"MRC1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000260314"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":121,"mucinous_within_mss_proxy_log2_median_ratio":105},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":738.6895,"q25_rsem":420.88925,"q75_rsem":1056.48975,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":331.0845,"q25_rsem":182.508625,"q75_rsem":549.522,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":374.2388,"q25_rsem":226.778,"q75_rsem":666.863,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":344.43265,"q25_rsem":177.14575,"q75_rsem":619.63855,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":357.01,"q25_rsem":177.877,"q75_rsem":655.7651,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.108449,"mucinous_within_mss_proxy_log2_median_ratio":0.119405},"entrez_gene_id":5788,"gene_symbol":"PTPRC","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000081237"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":174,"mucinous_within_mss_proxy_log2_median_ratio":109},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":63.1941,"q25_rsem":43.66065,"q75_rsem":82.72755,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":61.54785,"q25_rsem":32.33295,"q75_rsem":95.154475,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":82.2313,"q25_rsem":37.7694,"q75_rsem":147.81,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":76.93875,"q25_rsem":38.49875,"q75_rsem":138.5782,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":84.1213,"q25_rsem":39.1765,"q75_rsem":147.81,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.44456,"mucinous_within_mss_proxy_log2_median_ratio":0.094785},"entrez_gene_id":925,"gene_symbol":"CD8A","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000153563"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":52,"mucinous_within_mss_proxy_log2_median_ratio":153},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2047.86,"q25_rsem":1933.06,"q75_rsem":2162.66,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2153.4696,"q25_rsem":1772.315,"q75_rsem":2773.0846,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1818.26,"q25_rsem":1523.7023,"q75_rsem":2131.5447,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2142.99785,"q25_rsem":1683.3975,"q75_rsem":2669.7178,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2090.1607,"q25_rsem":1657.2434,"q75_rsem":2592.56,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.043029,"mucinous_within_mss_proxy_log2_median_ratio":-0.236952},"entrez_gene_id":961,"gene_symbol":"CD47","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000196776"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":76,"mucinous_within_mss_proxy_log2_median_ratio":148},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1.40845,"q25_rsem":1.015975,"q75_rsem":1.800925,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.677778,"expected_sample_count":92,"median_rsem":0.84165,"q25_rsem":0.0,"q75_rsem":3.7815,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.756757,"expected_sample_count":37,"median_rsem":0.639,"q25_rsem":0.0753,"q75_rsem":5.7588,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.723744,"expected_sample_count":440,"median_rsem":0.86545,"q25_rsem":0.0,"q75_rsem":3.773775,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.737662,"expected_sample_count":385,"median_rsem":0.8606,"q25_rsem":0.0,"q75_rsem":3.8471,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.014769,"mucinous_within_mss_proxy_log2_median_ratio":-0.186708},"entrez_gene_id":94025,"gene_symbol":"MUC16","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000181143"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":11,"mucinous_within_mss_proxy_log2_median_ratio":178},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":886.862,"q25_rsem":853.5935,"q75_rsem":920.1305,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1018.76975,"q25_rsem":390.05915,"q75_rsem":1749.509325,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":298.5533,"q25_rsem":106.5589,"q75_rsem":757.339,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.995434,"expected_sample_count":440,"median_rsem":945.1549,"q25_rsem":346.86375,"q75_rsem":1748.915,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.994805,"expected_sample_count":385,"median_rsem":848.9031,"q25_rsem":290.454,"q75_rsem":1693.22,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.262873,"mucinous_within_mss_proxy_log2_median_ratio":-1.659264},"entrez_gene_id":59272,"gene_symbol":"ACE2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000130234"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":143,"mucinous_within_mss_proxy_log2_median_ratio":43},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2514.81,"q25_rsem":2005.715,"q75_rsem":3023.905,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1720.5249,"q25_rsem":1196.558775,"q75_rsem":2247.26,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2592.64,"q25_rsem":1789.32,"q75_rsem":3129.9323,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1862.5654,"q25_rsem":1242.37095,"q75_rsem":2594.42,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1928.37,"q25_rsem":1264.43,"q75_rsem":2727.12,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.164443,"mucinous_within_mss_proxy_log2_median_ratio":0.476913},"entrez_gene_id":182,"gene_symbol":"JAG1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000101384"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":154,"mucinous_within_mss_proxy_log2_median_ratio":72},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":6190.6555,"q25_rsem":3231.68325,"q75_rsem":9149.62775,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1432.4971,"q25_rsem":936.21575,"q75_rsem":2756.3985,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1969.2953,"q25_rsem":906.3976,"q75_rsem":3324.63,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1607.2334,"q25_rsem":973.344,"q75_rsem":2600.615,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1656.9796,"q25_rsem":988.5344,"q75_rsem":2668.4,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.209887,"mucinous_within_mss_proxy_log2_median_ratio":0.292935},"entrez_gene_id":5159,"gene_symbol":"PDGFRB","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000113721"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":77,"mucinous_within_mss_proxy_log2_median_ratio":63},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":966.0055,"q25_rsem":618.90825,"q75_rsem":1313.10275,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":780.9135,"q25_rsem":495.369225,"q75_rsem":1219.30485,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":999.224,"q25_rsem":502.829,"q75_rsem":1370.5,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":782.78385,"q25_rsem":469.385175,"q75_rsem":1136.037275,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":789.2291,"q25_rsem":460.919,"q75_rsem":1136.0597,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.015262,"mucinous_within_mss_proxy_log2_median_ratio":0.351795},"entrez_gene_id":5156,"gene_symbol":"PDGFRA","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000134853"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":176,"mucinous_within_mss_proxy_log2_median_ratio":10},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1643.59035,"q25_rsem":838.245525,"q75_rsem":2448.935175,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":141.81255,"q25_rsem":80.05245,"q75_rsem":501.5962,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":527.54,"q25_rsem":135.899,"q75_rsem":699.207,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":186.9195,"q25_rsem":81.597075,"q75_rsem":487.07225,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":201.098,"q25_rsem":89.2857,"q75_rsem":534.294,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.500932,"mucinous_within_mss_proxy_log2_median_ratio":1.491898},"entrez_gene_id":8038,"gene_symbol":"ADAM12","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000148848"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":43,"mucinous_within_mss_proxy_log2_median_ratio":110},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":22.0502,"q25_rsem":14.68075,"q75_rsem":29.41965,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.988889,"expected_sample_count":92,"median_rsem":14.1817,"q25_rsem":7.994075,"q75_rsem":29.879925,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.918919,"expected_sample_count":37,"median_rsem":14.4956,"q25_rsem":7.3113,"q75_rsem":26.2638,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.990868,"expected_sample_count":440,"median_rsem":13.5234,"q25_rsem":7.80705,"q75_rsem":26.10495,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.984416,"expected_sample_count":385,"median_rsem":13.5146,"q25_rsem":7.7453,"q75_rsem":26.119,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.064829,"mucinous_within_mss_proxy_log2_median_ratio":0.093479},"entrez_gene_id":29126,"gene_symbol":"CD274","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000120217"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":160,"mucinous_within_mss_proxy_log2_median_ratio":47},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3926.9305,"q25_rsem":2161.60075,"q75_rsem":5692.26025,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1119.4563,"q25_rsem":736.3175,"q75_rsem":2256.78,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1677.15,"q25_rsem":811.1257,"q75_rsem":2747.0,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1234.9896,"q25_rsem":826.63765,"q75_rsem":2184.44345,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1328.0465,"q25_rsem":850.6039,"q75_rsem":2209.9207,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.246305,"mucinous_within_mss_proxy_log2_median_ratio":0.441205},"entrez_gene_id":4854,"gene_symbol":"NOTCH3","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000074181"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":83,"mucinous_within_mss_proxy_log2_median_ratio":46},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":118.82905,"q25_rsem":68.188075,"q75_rsem":169.470025,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":73.5307,"q25_rsem":39.9892,"q75_rsem":135.5288,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":101.9944,"q25_rsem":39.1434,"q75_rsem":178.7192,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":73.86155,"q25_rsem":37.535525,"q75_rsem":137.178275,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":75.2533,"q25_rsem":36.4128,"q75_rsem":144.433,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.032965,"mucinous_within_mss_proxy_log2_median_ratio":0.460269},"entrez_gene_id":6402,"gene_symbol":"SELL","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000188404"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":148,"mucinous_within_mss_proxy_log2_median_ratio":91},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2438.275,"q25_rsem":1984.2275,"q75_rsem":2892.3225,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1638.5652,"q25_rsem":1173.33355,"q75_rsem":2780.87,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2033.2328,"q25_rsem":1530.18,"q75_rsem":3123.47,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1783.27925,"q25_rsem":1266.4525,"q75_rsem":2638.250175,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1846.07,"q25_rsem":1296.7518,"q75_rsem":2623.22,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.171925,"mucinous_within_mss_proxy_log2_median_ratio":0.189143},"entrez_gene_id":1969,"gene_symbol":"EPHA2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000142627"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":66,"mucinous_within_mss_proxy_log2_median_ratio":11},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":255.50285,"q25_rsem":174.517275,"q75_rsem":336.488425,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":175.382,"q25_rsem":93.878,"q75_rsem":270.531,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":404.738,"q25_rsem":263.224,"q75_rsem":652.496,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":161.738,"q25_rsem":78.692925,"q75_rsem":282.47205,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":174.554,"q25_rsem":84.4445,"q75_rsem":340.433,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.006788,"mucinous_within_mss_proxy_log2_median_ratio":1.317997},"entrez_gene_id":2263,"gene_symbol":"FGFR2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000066468"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":57,"mucinous_within_mss_proxy_log2_median_ratio":96},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1672.895,"q25_rsem":1579.6375,"q75_rsem":1766.1525,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1287.0127,"q25_rsem":992.726225,"q75_rsem":1578.1875,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1423.6675,"q25_rsem":1179.44,"q75_rsem":1707.57,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1257.14,"q25_rsem":958.42755,"q75_rsem":1557.445,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1255.7879,"q25_rsem":959.983,"q75_rsem":1568.13,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.035406,"mucinous_within_mss_proxy_log2_median_ratio":0.179333},"entrez_gene_id":102,"gene_symbol":"ADAM10","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000137845"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":10,"mucinous_within_mss_proxy_log2_median_ratio":166},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2.2362,"q25_rsem":1.48365,"q75_rsem":2.98875,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.833333,"expected_sample_count":92,"median_rsem":1.9161,"q25_rsem":0.67185,"q75_rsem":5.258,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.72973,"expected_sample_count":37,"median_rsem":0.9322,"q25_rsem":0.0,"q75_rsem":3.1367,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.785388,"expected_sample_count":440,"median_rsem":1.5477,"q25_rsem":0.397575,"q75_rsem":4.6801,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.768831,"expected_sample_count":385,"median_rsem":1.3416,"q25_rsem":0.3647,"q75_rsem":4.2726,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.316546,"mucinous_within_mss_proxy_log2_median_ratio":-0.398951},"entrez_gene_id":6098,"gene_symbol":"ROS1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000047936"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":170,"mucinous_within_mss_proxy_log2_median_ratio":71},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1001.023,"q25_rsem":703.3995,"q75_rsem":1298.6465,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":479.21675,"q25_rsem":218.2125,"q75_rsem":1036.4955,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":706.4026,"q25_rsem":237.0344,"q75_rsem":1262.7,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":573.4226,"q25_rsem":216.69725,"q75_rsem":1247.515,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":608.3161,"q25_rsem":216.1728,"q75_rsem":1278.91,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.343505,"mucinous_within_mss_proxy_log2_median_ratio":0.300419},"entrez_gene_id":5243,"gene_symbol":"ABCB1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000085563"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":84,"mucinous_within_mss_proxy_log2_median_ratio":27},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":6.5582,"q25_rsem":5.4725,"q75_rsem":7.6439,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.955556,"expected_sample_count":92,"median_rsem":5.1768,"q25_rsem":2.18505,"q75_rsem":18.65325,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.945946,"expected_sample_count":37,"median_rsem":8.9784,"q25_rsem":2.1763,"q75_rsem":27.7837,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.958904,"expected_sample_count":440,"median_rsem":5.1422,"q25_rsem":2.103925,"q75_rsem":14.445375,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.958442,"expected_sample_count":385,"median_rsem":5.3217,"q25_rsem":2.1008,"q75_rsem":15.3181,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.033453,"mucinous_within_mss_proxy_log2_median_ratio":0.700053},"entrez_gene_id":340547,"gene_symbol":"VSIG1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000101842"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":30,"mucinous_within_mss_proxy_log2_median_ratio":64},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2352.11,"q25_rsem":1861.12,"q75_rsem":2843.1,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1250.26,"q25_rsem":889.13575,"q75_rsem":1754.029,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1446.7889,"q25_rsem":1146.78,"q75_rsem":1979.0545,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1146.115,"q25_rsem":786.67695,"q75_rsem":1682.445,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1158.8518,"q25_rsem":790.1746,"q75_rsem":1707.2275,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.109441,"mucinous_within_mss_proxy_log2_median_ratio":0.335841},"entrez_gene_id":5329,"gene_symbol":"PLAUR","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000011422"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":92,"mucinous_within_mss_proxy_log2_median_ratio":57},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1586.9595,"q25_rsem":874.26925,"q75_rsem":2299.64975,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":438.6886,"q25_rsem":317.435,"q75_rsem":602.141,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":591.83,"q25_rsem":401.917,"q75_rsem":892.5,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":447.5152,"q25_rsem":320.37925,"q75_rsem":612.631575,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":458.5074,"q25_rsem":325.996,"q75_rsem":631.5075,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.063606,"mucinous_within_mss_proxy_log2_median_ratio":0.402462},"entrez_gene_id":5175,"gene_symbol":"PECAM1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000261371"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":13,"mucinous_within_mss_proxy_log2_median_ratio":24},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":228.67065,"q25_rsem":132.247975,"q75_rsem":325.093325,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":110.0365,"q25_rsem":52.843125,"q75_rsem":222.9545,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":152.367,"q25_rsem":84.611,"q75_rsem":293.755,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":91.03575,"q25_rsem":51.1693,"q75_rsem":197.961,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":93.19,"q25_rsem":51.2884,"q75_rsem":204.3703,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.237388,"mucinous_within_mss_proxy_log2_median_ratio":0.736722},"entrez_gene_id":3815,"gene_symbol":"KIT","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000157404"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":133,"mucinous_within_mss_proxy_log2_median_ratio":61},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1975.3327,"q25_rsem":990.78405,"q75_rsem":2959.88135,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1444.90015,"q25_rsem":837.30045,"q75_rsem":3154.5125,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1955.1,"q25_rsem":1255.37,"q75_rsem":3338.6075,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1528.91715,"q25_rsem":726.365475,"q75_rsem":2755.69615,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1584.089,"q25_rsem":680.8839,"q75_rsem":2761.5676,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.132596,"mucinous_within_mss_proxy_log2_median_ratio":0.354527},"entrez_gene_id":8842,"gene_symbol":"PROM1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000007062"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":74,"mucinous_within_mss_proxy_log2_median_ratio":89},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3651.4385,"q25_rsem":2181.41275,"q75_rsem":5121.46425,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1428.15775,"q25_rsem":990.1842,"q75_rsem":2018.2975,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1664.27,"q25_rsem":1016.188,"q75_rsem":2723.36,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1436.005,"q25_rsem":1000.9305,"q75_rsem":2027.975,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1441.56,"q25_rsem":1008.97,"q75_rsem":2096.29,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.013466,"mucinous_within_mss_proxy_log2_median_ratio":0.212691},"entrez_gene_id":83483,"gene_symbol":"PLVAP","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000130300"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":28,"mucinous_within_mss_proxy_log2_median_ratio":68},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":48.03595,"q25_rsem":39.006075,"q75_rsem":57.065825,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":34.31355,"q25_rsem":17.7767,"q75_rsem":65.27785,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":39.4837,"q25_rsem":19.2009,"q75_rsem":56.8088,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.997717,"expected_sample_count":440,"median_rsem":31.54905,"q25_rsem":15.883475,"q75_rsem":67.640625,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.997403,"expected_sample_count":385,"median_rsem":31.5348,"q25_rsem":15.1423,"q75_rsem":66.2336,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.118238,"mucinous_within_mss_proxy_log2_median_ratio":0.314726},"entrez_gene_id":2852,"gene_symbol":"GPER1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000164850"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":89,"mucinous_within_mss_proxy_log2_median_ratio":76},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":49449.7,"q25_rsem":40281.8,"q75_rsem":58617.6,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":39389.0,"q25_rsem":28159.0,"q75_rsem":54585.369575,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":47940.4897,"q25_rsem":34912.2011,"q75_rsem":62964.1,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":39823.32645,"q25_rsem":28321.71465,"q75_rsem":54452.25,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":40773.9,"q25_rsem":28834.0,"q75_rsem":56121.5347,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.049852,"mucinous_within_mss_proxy_log2_median_ratio":0.267625},"entrez_gene_id":567,"gene_symbol":"B2M","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000166710"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":163,"mucinous_within_mss_proxy_log2_median_ratio":171},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":741.98405,"q25_rsem":392.816075,"q75_rsem":1091.152025,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":306.85195,"q25_rsem":102.6151,"q75_rsem":733.944,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":235.3832,"q25_rsem":93.1863,"q75_rsem":514.633,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":357.772,"q25_rsem":141.4115,"q75_rsem":746.6226,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":364.917,"q25_rsem":144.5285,"q75_rsem":747.668,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.24928,"mucinous_within_mss_proxy_log2_median_ratio":-0.60194},"entrez_gene_id":59352,"gene_symbol":"LGR6","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000133067"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":87,"mucinous_within_mss_proxy_log2_median_ratio":79},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1840.3415,"q25_rsem":1076.63225,"q75_rsem":2604.05075,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":461.336,"q25_rsem":320.08945,"q75_rsem":795.224475,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":556.5965,"q25_rsem":411.826,"q75_rsem":903.0,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":468.70305,"q25_rsem":298.51545,"q75_rsem":704.82825,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":475.396,"q25_rsem":295.7852,"q75_rsem":703.875,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.04322,"mucinous_within_mss_proxy_log2_median_ratio":0.247473},"entrez_gene_id":2697,"gene_symbol":"GJA1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000152661"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":70,"mucinous_within_mss_proxy_log2_median_ratio":100},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1621.7205,"q25_rsem":911.75575,"q75_rsem":2331.68525,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":512.2315,"q25_rsem":312.71425,"q75_rsem":809.822475,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":569.636,"q25_rsem":404.455,"q75_rsem":1134.1266,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":509.4044,"q25_rsem":300.625,"q75_rsem":835.354,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":513.8223,"q25_rsem":290.7798,"q75_rsem":886.2668,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.004465,"mucinous_within_mss_proxy_log2_median_ratio":0.16093},"entrez_gene_id":920,"gene_symbol":"CD4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000010610"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":26,"mucinous_within_mss_proxy_log2_median_ratio":165},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":600.8841,"q25_rsem":309.58115,"q75_rsem":892.18705,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":197.628,"q25_rsem":102.87375,"q75_rsem":536.42175,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":147.076,"q25_rsem":96.1184,"q75_rsem":355.9001,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":194.13,"q25_rsem":94.529625,"q75_rsem":452.74,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":179.701,"q25_rsem":94.3533,"q75_rsem":433.5589,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.136465,"mucinous_within_mss_proxy_log2_median_ratio":-0.398098},"entrez_gene_id":4311,"gene_symbol":"MME","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000196549"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":168,"mucinous_within_mss_proxy_log2_median_ratio":90},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":114.75425,"q25_rsem":61.763875,"q75_rsem":167.744625,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":48.2139,"q25_rsem":30.94185,"q75_rsem":77.544675,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":65.6038,"q25_rsem":28.449,"q75_rsem":107.7249,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":56.6941,"q25_rsem":32.23535,"q75_rsem":87.2582,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":60.0903,"q25_rsem":32.7542,"q75_rsem":90.6027,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.311877,"mucinous_within_mss_proxy_log2_median_ratio":0.207181},"entrez_gene_id":7293,"gene_symbol":"TNFRSF4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000186827"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":132,"mucinous_within_mss_proxy_log2_median_ratio":39},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":13991.35,"q25_rsem":8039.725,"q75_rsem":19942.975,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":4271.3943,"q25_rsem":3171.32855,"q75_rsem":8526.93725,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":6562.36,"q25_rsem":4099.72,"q75_rsem":11143.1,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":4526.65735,"q25_rsem":3198.018725,"q75_rsem":7569.50265,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":4682.6744,"q25_rsem":3269.34,"q75_rsem":7897.22,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.132596,"mucinous_within_mss_proxy_log2_median_ratio":0.53567},"entrez_gene_id":4323,"gene_symbol":"MMP14","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000157227"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":177,"mucinous_within_mss_proxy_log2_median_ratio":152},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":4.0102,"q25_rsem":3.8329,"q75_rsem":4.1875,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.955556,"expected_sample_count":92,"median_rsem":5.0584,"q25_rsem":2.610925,"q75_rsem":12.228925,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.945946,"expected_sample_count":37,"median_rsem":6.4972,"q25_rsem":1.8237,"q75_rsem":12.0685,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.96347,"expected_sample_count":440,"median_rsem":7.66395,"q25_rsem":2.6422,"q75_rsem":18.759375,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.963636,"expected_sample_count":385,"median_rsem":8.1716,"q25_rsem":2.5411,"q75_rsem":19.9137,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.598237,"mucinous_within_mss_proxy_log2_median_ratio":-0.208673},"entrez_gene_id":930,"gene_symbol":"CD19","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000177455"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":116,"mucinous_within_mss_proxy_log2_median_ratio":115},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":922.9917,"q25_rsem":511.21255,"q75_rsem":1334.77085,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":286.422,"q25_rsem":209.08205,"q75_rsem":444.10325,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":316.294,"q25_rsem":246.828,"q75_rsem":597.317,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":302.3014,"q25_rsem":211.1285,"q75_rsem":444.87175,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":307.749,"q25_rsem":214.3409,"q75_rsem":453.617,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.103264,"mucinous_within_mss_proxy_log2_median_ratio":0.065068},"entrez_gene_id":3791,"gene_symbol":"KDR","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000128052"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":80,"mucinous_within_mss_proxy_log2_median_ratio":45},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1243.3235,"q25_rsem":721.09525,"q75_rsem":1765.55175,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":355.1348,"q25_rsem":243.481625,"q75_rsem":563.6879,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":488.3714,"q25_rsem":282.428,"q75_rsem":919.9844,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":352.57355,"q25_rsem":228.286,"q75_rsem":557.72325,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":362.004,"q25_rsem":228.202,"q75_rsem":592.322,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.027562,"mucinous_within_mss_proxy_log2_median_ratio":0.468919},"entrez_gene_id":1464,"gene_symbol":"CSPG4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000173546"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":138,"mucinous_within_mss_proxy_log2_median_ratio":55},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2264.36325,"q25_rsem":1176.414875,"q75_rsem":3352.311625,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":559.59,"q25_rsem":376.146725,"q75_rsem":799.7505,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":784.5246,"q25_rsem":425.2038,"q75_rsem":1172.1984,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":589.0451,"q25_rsem":379.595675,"q75_rsem":937.82445,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":618.412,"q25_rsem":384.852,"q75_rsem":976.784,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.143953,"mucinous_within_mss_proxy_log2_median_ratio":0.412831},"entrez_gene_id":8829,"gene_symbol":"NRP1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000099250"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":147,"mucinous_within_mss_proxy_log2_median_ratio":134},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":65.7204,"q25_rsem":40.9026,"q75_rsem":90.5382,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":41.71085,"q25_rsem":24.641875,"q75_rsem":63.285725,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":43.6876,"q25_rsem":24.0722,"q75_rsem":79.8722,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":46.21375,"q25_rsem":28.19735,"q75_rsem":72.0706,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":46.9854,"q25_rsem":29.9166,"q75_rsem":74.7095,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.167993,"mucinous_within_mss_proxy_log2_median_ratio":-0.079333},"entrez_gene_id":919,"gene_symbol":"CD247","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000198821"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":126,"mucinous_within_mss_proxy_log2_median_ratio":30},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1705.1295,"q25_rsem":1215.20425,"q75_rsem":2195.05475,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":968.9802,"q25_rsem":747.78775,"q75_rsem":1481.867625,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1583.776,"q25_rsem":1073.07,"q75_rsem":2235.7351,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1014.61675,"q25_rsem":749.019075,"q75_rsem":1417.85575,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1054.04,"q25_rsem":769.88,"q75_rsem":1478.269,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.12127,"mucinous_within_mss_proxy_log2_median_ratio":0.641923},"entrez_gene_id":118429,"gene_symbol":"ANTXR2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000163297"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":118,"mucinous_within_mss_proxy_log2_median_ratio":53},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1651.57155,"q25_rsem":868.922325,"q75_rsem":2434.220775,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":408.809,"q25_rsem":258.196025,"q75_rsem":665.4634,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":571.4026,"q25_rsem":276.84,"q75_rsem":1197.88,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":427.7675,"q25_rsem":265.74855,"q75_rsem":697.97975,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":440.307,"q25_rsem":266.8752,"q75_rsem":735.945,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.106831,"mucinous_within_mss_proxy_log2_median_ratio":0.416835},"entrez_gene_id":2260,"gene_symbol":"FGFR1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000077782"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":100,"mucinous_within_mss_proxy_log2_median_ratio":121},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1858.429,"q25_rsem":1003.0585,"q75_rsem":2713.7995,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":492.1515,"q25_rsem":366.63105,"q75_rsem":643.6855,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":528.6714,"q25_rsem":389.1863,"q75_rsem":941.461,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":512.04295,"q25_rsem":366.097625,"q75_rsem":687.551275,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":517.0187,"q25_rsem":366.0687,"q75_rsem":719.794,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.070973,"mucinous_within_mss_proxy_log2_median_ratio":0.046018},"entrez_gene_id":947,"gene_symbol":"CD34","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000174059"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":5,"mucinous_within_mss_proxy_log2_median_ratio":177},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":6.81615,"q25_rsem":5.235875,"q75_rsem":8.396425,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.944444,"expected_sample_count":92,"median_rsem":6.2371,"q25_rsem":1.663,"q75_rsem":19.154425,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.945946,"expected_sample_count":37,"median_rsem":1.9235,"q25_rsem":1.228,"q75_rsem":3.6556,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.952055,"expected_sample_count":440,"median_rsem":5.0694,"q25_rsem":1.89875,"q75_rsem":23.753575,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.953247,"expected_sample_count":385,"median_rsem":4.268,"q25_rsem":1.755,"q75_rsem":21.6123,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.458156,"mucinous_within_mss_proxy_log2_median_ratio":-1.053857},"entrez_gene_id":2925,"gene_symbol":"GRPR","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000126010"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":27,"mucinous_within_mss_proxy_log2_median_ratio":98},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":43.77875,"q25_rsem":37.608625,"q75_rsem":49.948875,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":52.515,"q25_rsem":33.062275,"q75_rsem":103.64895,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.972973,"expected_sample_count":37,"median_rsem":55.1602,"q25_rsem":31.3126,"q75_rsem":106.076,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.995434,"expected_sample_count":440,"median_rsem":48.86095,"q25_rsem":26.12575,"q75_rsem":83.768875,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.992208,"expected_sample_count":385,"median_rsem":47.9716,"q25_rsem":25.1506,"q75_rsem":80.7542,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.127998,"mucinous_within_mss_proxy_log2_median_ratio":0.171638},"entrez_gene_id":4684,"gene_symbol":"NCAM1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000149294"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":98,"mucinous_within_mss_proxy_log2_median_ratio":16},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":18.29795,"q25_rsem":10.611225,"q75_rsem":25.984675,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.966667,"expected_sample_count":92,"median_rsem":11.31785,"q25_rsem":6.174475,"q75_rsem":20.6033,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.972973,"expected_sample_count":37,"median_rsem":24.3993,"q25_rsem":9.4274,"q75_rsem":53.3177,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.981735,"expected_sample_count":440,"median_rsem":11.42685,"q25_rsem":5.256325,"q75_rsem":22.646925,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.984416,"expected_sample_count":385,"median_rsem":11.9304,"q25_rsem":5.2478,"q75_rsem":24.4094,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.070016,"mucinous_within_mss_proxy_log2_median_ratio":1.031328},"entrez_gene_id":4919,"gene_symbol":"ROR1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000185483"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":108,"mucinous_within_mss_proxy_log2_median_ratio":29},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":512.67,"q25_rsem":445.697,"q75_rsem":579.643,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":270.5203,"q25_rsem":153.688025,"q75_rsem":432.028,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":425.132,"q25_rsem":294.554,"q75_rsem":579.469,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":270.4278,"q25_rsem":146.312,"q75_rsem":427.9055,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":285.835,"q25_rsem":151.976,"q75_rsem":442.827,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.079161,"mucinous_within_mss_proxy_log2_median_ratio":0.650732},"entrez_gene_id":7162,"gene_symbol":"TPBG","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000146242"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":111,"mucinous_within_mss_proxy_log2_median_ratio":87},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2805.51,"q25_rsem":2757.9,"q75_rsem":2853.12,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":3253.28,"q25_rsem":2689.32405,"q75_rsem":4325.9263,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":3898.46,"q25_rsem":3249.8011,"q75_rsem":4382.6,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":3341.8337,"q25_rsem":2620.16,"q75_rsem":4356.87135,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":3471.221,"q25_rsem":2661.42,"q75_rsem":4382.6,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.09352,"mucinous_within_mss_proxy_log2_median_ratio":0.222203},"entrez_gene_id":2050,"gene_symbol":"EPHB4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000196411"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":101,"mucinous_within_mss_proxy_log2_median_ratio":3},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":8901.245,"q25_rsem":5560.2175,"q75_rsem":12242.2725,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":641.3685,"q25_rsem":181.54375,"q75_rsem":2422.391025,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2428.63,"q25_rsem":938.1162,"q75_rsem":3963.69,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":626.57705,"q25_rsem":170.86695,"q75_rsem":1844.4275,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":674.0418,"q25_rsem":186.409,"q75_rsem":2010.0346,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.071576,"mucinous_within_mss_proxy_log2_median_ratio":1.952872},"entrez_gene_id":4585,"gene_symbol":"MUC4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000145113"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":173,"mucinous_within_mss_proxy_log2_median_ratio":94},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":19.9644,"q25_rsem":12.1756,"q75_rsem":27.7532,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.988889,"expected_sample_count":92,"median_rsem":17.3306,"q25_rsem":8.782675,"q75_rsem":34.241075,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":25.0303,"q25_rsem":11.0486,"q75_rsem":44.288,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.997717,"expected_sample_count":440,"median_rsem":21.9537,"q25_rsem":11.19965,"q75_rsem":37.830775,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":22.9358,"q25_rsem":11.7134,"q75_rsem":39.3402,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.384916,"mucinous_within_mss_proxy_log2_median_ratio":0.181465},"entrez_gene_id":5133,"gene_symbol":"PDCD1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000188389"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":6,"mucinous_within_mss_proxy_log2_median_ratio":18},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":27.8125,"q25_rsem":16.4652,"q75_rsem":39.1598,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":32.20325,"q25_rsem":16.648525,"q75_rsem":52.026525,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":47.9154,"q25_rsem":20.0,"q75_rsem":80.4322,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.997717,"expected_sample_count":440,"median_rsem":24.21815,"q25_rsem":13.55995,"q75_rsem":47.8279,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.997403,"expected_sample_count":385,"median_rsem":24.0722,"q25_rsem":13.634,"q75_rsem":49.6183,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.405236,"mucinous_within_mss_proxy_log2_median_ratio":0.955826},"entrez_gene_id":9429,"gene_symbol":"ABCG2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000118777"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":106,"mucinous_within_mss_proxy_log2_median_ratio":4},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":101.3115,"q25_rsem":82.14475,"q75_rsem":120.47825,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":52.3253,"q25_rsem":30.750225,"q75_rsem":118.6523,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":188.374,"q25_rsem":58.1354,"q75_rsem":526.802,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":50.85305,"q25_rsem":27.517575,"q75_rsem":105.090175,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":55.3077,"q25_rsem":27.5591,"q75_rsem":118.216,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.078512,"mucinous_within_mss_proxy_log2_median_ratio":1.868738},"entrez_gene_id":50636,"gene_symbol":"ANO7","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000146205"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":164,"mucinous_within_mss_proxy_log2_median_ratio":149},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1495.745,"q25_rsem":1377.9625,"q75_rsem":1613.5275,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1549.26,"q25_rsem":1021.976875,"q75_rsem":2189.968875,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1594.4,"q25_rsem":979.69,"q75_rsem":2243.96,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1830.8024,"q25_rsem":1192.90845,"q75_rsem":2480.610375,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1873.44,"q25_rsem":1205.1772,"q75_rsem":2494.96,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.273949,"mucinous_within_mss_proxy_log2_median_ratio":-0.199346},"entrez_gene_id":1001,"gene_symbol":"CDH3","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000062038"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":167,"mucinous_within_mss_proxy_log2_median_ratio":2},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3.1715,"q25_rsem":1.9513,"q75_rsem":4.3917,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.8,"expected_sample_count":92,"median_rsem":1.1014,"q25_rsem":0.432825,"q75_rsem":3.098125,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.945946,"expected_sample_count":37,"median_rsem":9.7541,"q25_rsem":2.375,"q75_rsem":122.626,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.808219,"expected_sample_count":440,"median_rsem":1.2237,"q25_rsem":0.358575,"q75_rsem":3.63005,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.823377,"expected_sample_count":385,"median_rsem":1.585,"q25_rsem":0.3995,"q75_rsem":4.5,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.298813,"mucinous_within_mss_proxy_log2_median_ratio":2.273853},"entrez_gene_id":51208,"gene_symbol":"CLDN18","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000066405"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":67,"mucinous_within_mss_proxy_log2_median_ratio":136},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":290.9284,"q25_rsem":164.8391,"q75_rsem":417.0177,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":480.9349,"q25_rsem":182.2102,"q75_rsem":805.011,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":453.0486,"q25_rsem":155.214,"q75_rsem":665.148,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":481.39325,"q25_rsem":222.556725,"q75_rsem":963.940725,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":481.178,"q25_rsem":223.572,"q75_rsem":965.187,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.000728,"mucinous_within_mss_proxy_log2_median_ratio":-0.087363},"entrez_gene_id":1803,"gene_symbol":"DPP4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000197635"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":55,"mucinous_within_mss_proxy_log2_median_ratio":56},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3388.755,"q25_rsem":2321.6625,"q75_rsem":4455.8475,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2873.34725,"q25_rsem":2021.05285,"q75_rsem":3685.8919,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":3644.31,"q25_rsem":2456.18,"q75_rsem":4343.56,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2751.345,"q25_rsem":1835.814275,"q75_rsem":3701.55,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2793.81,"q25_rsem":1848.67,"q75_rsem":3852.53,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.040484,"mucinous_within_mss_proxy_log2_median_ratio":0.40538},"entrez_gene_id":2525,"gene_symbol":"FUT3","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000171124"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":180,"mucinous_within_mss_proxy_log2_median_ratio":180},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.0,"expected_sample_count":2,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.608696,"detected_fraction":0.25,"expected_sample_count":92,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0932,"sample_count":56},"mss_proxy_mucinous":{"coverage_fraction":0.621622,"detected_fraction":0.304348,"expected_sample_count":37,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.31135,"sample_count":23},"mss_proxy_nonmucinous":{"coverage_fraction":0.586364,"detected_fraction":0.255814,"expected_sample_count":440,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.336775,"sample_count":258},"mss_proxy_other_site":{"coverage_fraction":0.584416,"detected_fraction":0.262222,"expected_sample_count":385,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.3475,"sample_count":225}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.0,"mucinous_within_mss_proxy_log2_median_ratio":0.0},"entrez_gene_id":2835,"gene_symbol":"GPR12","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000132975"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":161,"mucinous_within_mss_proxy_log2_median_ratio":102},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.0,"expected_sample_count":2,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.655556,"expected_sample_count":92,"median_rsem":0.61105,"q25_rsem":0.0,"q75_rsem":2.1495,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.702703,"expected_sample_count":37,"median_rsem":1.0473,"q25_rsem":0.0,"q75_rsem":2.4902,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.728311,"expected_sample_count":440,"median_rsem":0.85215,"q25_rsem":0.0,"q75_rsem":2.262725,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.742857,"expected_sample_count":385,"median_rsem":0.912,"q25_rsem":0.0,"q75_rsem":2.4681,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.247081,"mucinous_within_mss_proxy_log2_median_ratio":0.144522},"entrez_gene_id":2903,"gene_symbol":"GRIN2A","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000183454"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":29,"mucinous_within_mss_proxy_log2_median_ratio":125},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1108.17,"q25_rsem":1088.905,"q75_rsem":1127.435,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1174.11085,"q25_rsem":755.960575,"q75_rsem":1808.80055,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1094.24,"q25_rsem":910.6681,"q75_rsem":1307.97,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1093.04205,"q25_rsem":769.373325,"q75_rsem":1493.335,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1082.45,"q25_rsem":773.348,"q75_rsem":1419.49,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.117164,"mucinous_within_mss_proxy_log2_median_ratio":0.001579},"entrez_gene_id":3480,"gene_symbol":"IGF1R","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000140443"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":136,"mucinous_within_mss_proxy_log2_median_ratio":58},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2495.27575,"q25_rsem":1280.538625,"q75_rsem":3710.012875,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":380.32915,"q25_rsem":186.86855,"q75_rsem":856.58325,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":533.258,"q25_rsem":222.446,"q75_rsem":1336.0,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":403.4285,"q25_rsem":189.811125,"q75_rsem":768.581,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":420.0824,"q25_rsem":196.8253,"q75_rsem":770.022,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.143066,"mucinous_within_mss_proxy_log2_median_ratio":0.401652},"entrez_gene_id":22801,"gene_symbol":"ITGA11","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000137809"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":19,"mucinous_within_mss_proxy_log2_median_ratio":112},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":156.46035,"q25_rsem":120.270025,"q75_rsem":192.650675,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":174.802,"q25_rsem":97.173375,"q75_rsem":331.640775,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":167.348,"q25_rsem":84.0797,"q75_rsem":292.757,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":158.38405,"q25_rsem":81.377725,"q75_rsem":295.812,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":154.824,"q25_rsem":77.4542,"q75_rsem":287.983,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.174034,"mucinous_within_mss_proxy_log2_median_ratio":0.078939},"entrez_gene_id":3680,"gene_symbol":"ITGA9","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000144668"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":24,"mucinous_within_mss_proxy_log2_median_ratio":51},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":259.67555,"q25_rsem":144.460325,"q75_rsem":374.890775,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":89.25585,"q25_rsem":57.79155,"q75_rsem":143.24995,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":108.4392,"q25_rsem":50.0922,"q75_rsem":181.123,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":80.4975,"q25_rsem":49.313975,"q75_rsem":133.11405,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":80.33,"q25_rsem":48.5063,"q75_rsem":135.6772,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.150233,"mucinous_within_mss_proxy_log2_median_ratio":0.425302},"entrez_gene_id":3690,"gene_symbol":"ITGB3","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000259207"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":38,"mucinous_within_mss_proxy_log2_median_ratio":174},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1003.943,"q25_rsem":855.2095,"q75_rsem":1152.6765,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1342.84715,"q25_rsem":607.216525,"q75_rsem":2536.7313,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":744.622,"q25_rsem":358.531,"q75_rsem":1685.39,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1335.1876,"q25_rsem":630.95105,"q75_rsem":2843.093325,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1264.9308,"q25_rsem":625.817,"q75_rsem":2815.5804,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.086171,"mucinous_within_mss_proxy_log2_median_ratio":-0.841606},"entrez_gene_id":8549,"gene_symbol":"LGR5","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000139292"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":17,"mucinous_within_mss_proxy_log2_median_ratio":126},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.5,"expected_sample_count":2,"median_rsem":23.07115,"q25_rsem":11.535575,"q75_rsem":34.606725,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.755556,"expected_sample_count":92,"median_rsem":2.0827,"q25_rsem":0.437075,"q75_rsem":6.383225,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.864865,"expected_sample_count":37,"median_rsem":1.745,"q25_rsem":0.639,"q75_rsem":13.1303,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.799087,"expected_sample_count":440,"median_rsem":1.7493,"q25_rsem":0.556375,"q75_rsem":5.987125,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.815584,"expected_sample_count":385,"median_rsem":1.6865,"q25_rsem":0.5735,"q75_rsem":5.9986,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.198467,"mucinous_within_mss_proxy_log2_median_ratio":-0.002258},"entrez_gene_id":57689,"gene_symbol":"LRRC4C","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000148948"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":158,"mucinous_within_mss_proxy_log2_median_ratio":22},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":712.1015,"q25_rsem":483.26725,"q75_rsem":940.93575,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":178.9935,"q25_rsem":51.208525,"q75_rsem":518.8448,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":340.684,"q25_rsem":114.5486,"q75_rsem":2907.23,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.993151,"expected_sample_count":440,"median_rsem":194.5749,"q25_rsem":53.76845,"q75_rsem":829.51215,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.992208,"expected_sample_count":385,"median_rsem":210.097,"q25_rsem":56.7297,"q75_rsem":980.7458,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.229961,"mucinous_within_mss_proxy_log2_median_ratio":0.804941},"entrez_gene_id":140453,"gene_symbol":"MUC17","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000169876"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":22,"mucinous_within_mss_proxy_log2_median_ratio":80},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1896.906,"q25_rsem":1328.274,"q75_rsem":2465.538,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2441.41,"q25_rsem":1646.59955,"q75_rsem":3176.955,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2580.63,"q25_rsem":1909.0465,"q75_rsem":3034.17,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2175.33085,"q25_rsem":1563.0472,"q75_rsem":3060.325,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2175.65,"q25_rsem":1574.9129,"q75_rsem":3027.2849,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.166196,"mucinous_within_mss_proxy_log2_median_ratio":0.246384},"entrez_gene_id":4756,"gene_symbol":"NEO1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000067141"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":102,"mucinous_within_mss_proxy_log2_median_ratio":155},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":10.0843,"q25_rsem":5.7733,"q75_rsem":14.3953,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.988889,"expected_sample_count":92,"median_rsem":21.6883,"q25_rsem":10.435525,"q75_rsem":51.1376,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":18.7063,"q25_rsem":7.8836,"q75_rsem":64.695,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.995434,"expected_sample_count":440,"median_rsem":22.81915,"q25_rsem":10.243,"q75_rsem":50.879375,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.997403,"expected_sample_count":385,"median_rsem":22.8652,"q25_rsem":9.4147,"q75_rsem":50.8625,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.07296,"mucinous_within_mss_proxy_log2_median_ratio":-0.273465},"entrez_gene_id":4804,"gene_symbol":"NGFR","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000064300"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":8,"mucinous_within_mss_proxy_log2_median_ratio":1},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":107.579,"q25_rsem":95.567,"q75_rsem":119.591,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.608696,"detected_fraction":0.928571,"expected_sample_count":92,"median_rsem":39.4393,"q25_rsem":3.720325,"q75_rsem":189.01225,"sample_count":56},"mss_proxy_mucinous":{"coverage_fraction":0.621622,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":194.887,"q25_rsem":36.50595,"q75_rsem":778.939,"sample_count":23},"mss_proxy_nonmucinous":{"coverage_fraction":0.586364,"detected_fraction":0.910853,"expected_sample_count":440,"median_rsem":25.5699,"q25_rsem":1.90115,"q75_rsem":212.76425,"sample_count":258},"mss_proxy_other_site":{"coverage_fraction":0.584416,"detected_fraction":0.915556,"expected_sample_count":385,"median_rsem":30.3497,"q25_rsem":2.2902,"q75_rsem":244.85,"sample_count":225}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.367306,"mucinous_within_mss_proxy_log2_median_ratio":2.882157},"entrez_gene_id":6476,"gene_symbol":"SI","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000090402"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":3,"mucinous_within_mss_proxy_log2_median_ratio":176},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.5,"expected_sample_count":2,"median_rsem":1.2471,"q25_rsem":0.62355,"q75_rsem":1.87065,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.944444,"expected_sample_count":92,"median_rsem":7.0481,"q25_rsem":2.5144,"q75_rsem":22.995125,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.756757,"expected_sample_count":37,"median_rsem":2.401,"q25_rsem":0.4037,"q75_rsem":10.5795,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.945205,"expected_sample_count":440,"median_rsem":5.76995,"q25_rsem":2.038975,"q75_rsem":19.97125,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.927273,"expected_sample_count":385,"median_rsem":4.6619,"q25_rsem":1.7067,"q75_rsem":18.2271,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.507362,"mucinous_within_mss_proxy_log2_median_ratio":-0.993186},"entrez_gene_id":151258,"gene_symbol":"SLC38A11","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000169507"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":137,"mucinous_within_mss_proxy_log2_median_ratio":84},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":172.76925,"q25_rsem":114.755875,"q75_rsem":230.782625,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":68.44795,"q25_rsem":28.9605,"q75_rsem":194.36525,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":86.901,"q25_rsem":56.7425,"q75_rsem":219.6291,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":73.79865,"q25_rsem":27.888875,"q75_rsem":179.56025,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":75.7002,"q25_rsem":29.9928,"q75_rsem":174.882,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.143298,"mucinous_within_mss_proxy_log2_median_ratio":0.232867},"entrez_gene_id":83959,"gene_symbol":"SLC4A11","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000088836"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":120,"mucinous_within_mss_proxy_log2_median_ratio":118},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1058.275,"q25_rsem":1033.5825,"q75_rsem":1082.9675,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":657.129,"q25_rsem":546.634,"q75_rsem":770.696625,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":717.436,"q25_rsem":598.7527,"q75_rsem":966.359,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":690.07095,"q25_rsem":566.25175,"q75_rsem":846.2055,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":708.5,"q25_rsem":578.3216,"q75_rsem":869.075,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.108432,"mucinous_within_mss_proxy_log2_median_ratio":0.056026},"entrez_gene_id":80024,"gene_symbol":"SLC8B1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000089060"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":91,"mucinous_within_mss_proxy_log2_median_ratio":169},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":573.539,"q25_rsem":433.2495,"q75_rsem":713.8285,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1284.8344,"q25_rsem":854.272525,"q75_rsem":2160.2668,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":924.289,"q25_rsem":746.9073,"q75_rsem":1229.7375,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1391.335,"q25_rsem":885.706125,"q75_rsem":2119.632575,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1337.4535,"q25_rsem":855.9351,"q75_rsem":2050.73,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.057862,"mucinous_within_mss_proxy_log2_median_ratio":-0.58953},"entrez_gene_id":28231,"gene_symbol":"SLCO4A1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000101187"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":45,"mucinous_within_mss_proxy_log2_median_ratio":49},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":109.26165,"q25_rsem":72.543475,"q75_rsem":145.979825,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":53.56585,"q25_rsem":29.91185,"q75_rsem":110.669,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":69.0,"q25_rsem":34.751,"q75_rsem":181.9,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":50.6831,"q25_rsem":27.1541,"q75_rsem":90.7177,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":51.3084,"q25_rsem":27.3785,"q75_rsem":91.8554,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.060956,"mucinous_within_mss_proxy_log2_median_ratio":0.437662},"entrez_gene_id":79689,"gene_symbol":"STEAP4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000127954"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":184,"mucinous_within_mss_proxy_log2_median_ratio":184},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.0,"expected_sample_count":2,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.608696,"detected_fraction":0.053571,"expected_sample_count":92,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":56},"mss_proxy_mucinous":{"coverage_fraction":0.621622,"detected_fraction":0.0,"expected_sample_count":37,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":23},"mss_proxy_nonmucinous":{"coverage_fraction":0.586364,"detected_fraction":0.069767,"expected_sample_count":440,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":258},"mss_proxy_other_site":{"coverage_fraction":0.584416,"detected_fraction":0.066667,"expected_sample_count":385,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":225}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.0,"mucinous_within_mss_proxy_log2_median_ratio":0.0},"entrez_gene_id":132724,"gene_symbol":"TMPRSS11B","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000185873"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":153,"mucinous_within_mss_proxy_log2_median_ratio":101},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":24.4796,"q25_rsem":13.3365,"q75_rsem":35.6227,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":10.70785,"q25_rsem":6.2388,"q75_rsem":17.8129,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":13.4565,"q25_rsem":6.9248,"q75_rsem":20.8614,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.990868,"expected_sample_count":440,"median_rsem":12.0161,"q25_rsem":6.84465,"q75_rsem":21.20975,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.98961,"expected_sample_count":385,"median_rsem":12.468,"q25_rsem":6.867,"q75_rsem":22.0518,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.202059,"mucinous_within_mss_proxy_log2_median_ratio":0.151421},"entrez_gene_id":943,"gene_symbol":"TNFRSF8","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000120949"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":162,"mucinous_within_mss_proxy_log2_median_ratio":8},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.5,"expected_sample_count":2,"median_rsem":1.0967,"q25_rsem":0.54835,"q75_rsem":1.64505,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.666667,"expected_sample_count":92,"median_rsem":0.58505,"q25_rsem":0.0,"q75_rsem":1.4855,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.891892,"expected_sample_count":37,"median_rsem":4.4612,"q25_rsem":1.2749,"q75_rsem":15.363,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.716895,"expected_sample_count":440,"median_rsem":0.72025,"q25_rsem":0.0,"q75_rsem":1.772275,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.745455,"expected_sample_count":385,"median_rsem":0.8826,"q25_rsem":0.0,"q75_rsem":2.3522,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.248198,"mucinous_within_mss_proxy_log2_median_ratio":1.6666},"entrez_gene_id":55503,"gene_symbol":"TRPV6","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000165125"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":78,"mucinous_within_mss_proxy_log2_median_ratio":44},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":263.3025,"q25_rsem":237.03025,"q75_rsem":289.57475,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":103.71065,"q25_rsem":48.01035,"q75_rsem":182.5965,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":144.9375,"q25_rsem":94.2534,"q75_rsem":272.5,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":104.2314,"q25_rsem":58.582675,"q75_rsem":186.2647,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":105.379,"q25_rsem":63.2695,"q75_rsem":194.0522,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.022805,"mucinous_within_mss_proxy_log2_median_ratio":0.471785},"entrez_gene_id":921,"gene_symbol":"CD5","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000110448"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":114,"mucinous_within_mss_proxy_log2_median_ratio":15},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1289.14755,"q25_rsem":659.196325,"q75_rsem":1919.098775,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":192.8646,"q25_rsem":105.070525,"q75_rsem":329.60825,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":413.835,"q25_rsem":92.8543,"q75_rsem":702.296,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":198.84205,"q25_rsem":96.7654,"q75_rsem":388.447475,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":206.826,"q25_rsem":92.8543,"q75_rsem":424.5556,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.100327,"mucinous_within_mss_proxy_log2_median_ratio":1.053677},"entrez_gene_id":9332,"gene_symbol":"CD163","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000177575"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":64,"mucinous_within_mss_proxy_log2_median_ratio":21},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":12.33145,"q25_rsem":9.455775,"q75_rsem":15.207125,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":20.70825,"q25_rsem":9.301375,"q75_rsem":42.2889,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":35.3817,"q25_rsem":9.665,"q75_rsem":64.357,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.993151,"expected_sample_count":440,"median_rsem":19.7163,"q25_rsem":8.976675,"q75_rsem":40.799275,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.992208,"expected_sample_count":385,"median_rsem":20.5069,"q25_rsem":8.8713,"q75_rsem":44.151,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.013444,"mucinous_within_mss_proxy_log2_median_ratio":0.812447},"entrez_gene_id":5979,"gene_symbol":"RET","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000165731"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":21,"mucinous_within_mss_proxy_log2_median_ratio":14},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":11.39615,"q25_rsem":8.988125,"q75_rsem":13.804175,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.8,"expected_sample_count":92,"median_rsem":2.455,"q25_rsem":0.43345,"q75_rsem":8.39605,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.945946,"expected_sample_count":37,"median_rsem":5.2897,"q25_rsem":1.2005,"q75_rsem":16.2122,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.783105,"expected_sample_count":440,"median_rsem":1.96245,"q25_rsem":0.350075,"q75_rsem":6.881175,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.794805,"expected_sample_count":385,"median_rsem":2.075,"q25_rsem":0.3785,"q75_rsem":7.4809,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.168099,"mucinous_within_mss_proxy_log2_median_ratio":1.0862},"entrez_gene_id":250,"gene_symbol":"ALPP","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000163283"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":42,"mucinous_within_mss_proxy_log2_median_ratio":156},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":427.927,"q25_rsem":399.156,"q75_rsem":456.698,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":488.89585,"q25_rsem":395.12275,"q75_rsem":588.7837,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":388.3144,"q25_rsem":346.765,"q75_rsem":505.461,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":476.5857,"q25_rsem":389.604875,"q75_rsem":573.32025,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":466.9382,"q25_rsem":377.303,"q75_rsem":564.399,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.066157,"mucinous_within_mss_proxy_log2_median_ratio":-0.294824},"entrez_gene_id":657,"gene_symbol":"BMPR1A","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000107779"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":41,"mucinous_within_mss_proxy_log2_median_ratio":83},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":270.0081,"q25_rsem":158.40015,"q75_rsem":381.61605,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.933333,"expected_sample_count":92,"median_rsem":8.6067,"q25_rsem":2.8705,"q75_rsem":28.985175,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.918919,"expected_sample_count":37,"median_rsem":10.0,"q25_rsem":1.0456,"q75_rsem":75.991,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.915525,"expected_sample_count":440,"median_rsem":8.3585,"q25_rsem":2.12475,"q75_rsem":39.974825,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.911688,"expected_sample_count":385,"median_rsem":8.1522,"q25_rsem":1.9617,"q75_rsem":45.4689,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.069922,"mucinous_within_mss_proxy_log2_median_ratio":0.233154},"entrez_gene_id":1950,"gene_symbol":"EGF","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000138798"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":72,"mucinous_within_mss_proxy_log2_median_ratio":164},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":52.3889,"q25_rsem":28.38785,"q75_rsem":76.38995,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.988889,"expected_sample_count":92,"median_rsem":45.1248,"q25_rsem":19.52005,"q75_rsem":132.90385,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":34.2787,"q25_rsem":12.9697,"q75_rsem":120.598,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.995434,"expected_sample_count":440,"median_rsem":45.3223,"q25_rsem":15.801975,"q75_rsem":149.2165,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.997403,"expected_sample_count":385,"median_rsem":45.3705,"q25_rsem":15.3635,"q75_rsem":148.564,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.007665,"mucinous_within_mss_proxy_log2_median_ratio":-0.392909},"entrez_gene_id":2047,"gene_symbol":"EPHB1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000154928"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":107,"mucinous_within_mss_proxy_log2_median_ratio":168},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":5.97745,"q25_rsem":3.354275,"q75_rsem":8.600625,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.977778,"expected_sample_count":92,"median_rsem":6.8547,"q25_rsem":3.05685,"q75_rsem":11.4639,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.945946,"expected_sample_count":37,"median_rsem":4.6901,"q25_rsem":2.0747,"q75_rsem":13.7757,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.97032,"expected_sample_count":440,"median_rsem":7.34295,"q25_rsem":3.543375,"q75_rsem":14.35005,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.966234,"expected_sample_count":385,"median_rsem":7.2959,"q25_rsem":3.6364,"q75_rsem":14.4928,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.078842,"mucinous_within_mss_proxy_log2_median_ratio":-0.552104},"entrez_gene_id":356,"gene_symbol":"FASLG","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000117560"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":25,"mucinous_within_mss_proxy_log2_median_ratio":122},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2351.385,"q25_rsem":2302.4375,"q75_rsem":2400.3325,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1989.645,"q25_rsem":1507.1245,"q75_rsem":2540.8525,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1896.3531,"q25_rsem":1267.07,"q75_rsem":2604.95,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1842.5741,"q25_rsem":1379.7703,"q75_rsem":2505.324625,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1794.4323,"q25_rsem":1345.64,"q75_rsem":2506.3595,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.148905,"mucinous_within_mss_proxy_log2_median_ratio":0.041483},"entrez_gene_id":2984,"gene_symbol":"GUCY2C","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000070019"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":9,"mucinous_within_mss_proxy_log2_median_ratio":142},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":31.55375,"q25_rsem":18.335825,"q75_rsem":44.771675,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":21.4082,"q25_rsem":11.0857,"q75_rsem":30.211675,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":15.8692,"q25_rsem":8.3067,"q75_rsem":32.5901,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.997717,"expected_sample_count":440,"median_rsem":17.8789,"q25_rsem":9.476925,"q75_rsem":31.032875,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.997403,"expected_sample_count":385,"median_rsem":16.8837,"q25_rsem":8.8786,"q75_rsem":31.1256,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.325382,"mucinous_within_mss_proxy_log2_median_ratio":-0.162383},"entrez_gene_id":9365,"gene_symbol":"KL","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000133116"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":182,"mucinous_within_mss_proxy_log2_median_ratio":182},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.0,"expected_sample_count":2,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.608696,"detected_fraction":0.0,"expected_sample_count":92,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":56},"mss_proxy_mucinous":{"coverage_fraction":0.621622,"detected_fraction":0.043478,"expected_sample_count":37,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":23},"mss_proxy_nonmucinous":{"coverage_fraction":0.586364,"detected_fraction":0.0,"expected_sample_count":440,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":258},"mss_proxy_other_site":{"coverage_fraction":0.584416,"detected_fraction":0.004444,"expected_sample_count":385,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":225}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.0,"mucinous_within_mss_proxy_log2_median_ratio":0.0},"entrez_gene_id":441670,"gene_symbol":"OR4M1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000176299"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":54,"mucinous_within_mss_proxy_log2_median_ratio":113},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":5.2573,"q25_rsem":4.45645,"q75_rsem":6.05815,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.944444,"expected_sample_count":92,"median_rsem":3.473,"q25_rsem":2.0621,"q75_rsem":6.4516,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.918919,"expected_sample_count":37,"median_rsem":3.5575,"q25_rsem":2.2199,"q75_rsem":6.859,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.922374,"expected_sample_count":440,"median_rsem":3.33805,"q25_rsem":1.7433,"q75_rsem":5.9673,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.916883,"expected_sample_count":385,"median_rsem":3.3457,"q25_rsem":1.6476,"q75_rsem":5.8198,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.041654,"mucinous_within_mss_proxy_log2_median_ratio":0.071196},"entrez_gene_id":6506,"gene_symbol":"SLC1A2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000110436"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":103,"mucinous_within_mss_proxy_log2_median_ratio":120},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.5,"expected_sample_count":2,"median_rsem":10.60025,"q25_rsem":5.300125,"q75_rsem":15.900375,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.622222,"expected_sample_count":92,"median_rsem":0.45715,"q25_rsem":0.0,"q75_rsem":1.304225,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.648649,"expected_sample_count":37,"median_rsem":0.542,"q25_rsem":0.0,"q75_rsem":1.1298,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.648402,"expected_sample_count":440,"median_rsem":0.4933,"q25_rsem":0.0,"q75_rsem":1.4174,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.654545,"expected_sample_count":385,"median_rsem":0.5335,"q25_rsem":0.0,"q75_rsem":1.423,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.073679,"mucinous_within_mss_proxy_log2_median_ratio":0.046299},"entrez_gene_id":85413,"gene_symbol":"SLC22A16","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000004809"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":129,"mucinous_within_mss_proxy_log2_median_ratio":62},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":719.826,"q25_rsem":582.2065,"q75_rsem":857.4455,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":417.419,"q25_rsem":336.266775,"q75_rsem":579.361,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":558.2966,"q25_rsem":444.587,"q75_rsem":778.987,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":436.987,"q25_rsem":306.27565,"q75_rsem":614.191575,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":456.188,"q25_rsem":309.1235,"q75_rsem":638.959,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.127839,"mucinous_within_mss_proxy_log2_median_ratio":0.352726},"entrez_gene_id":7039,"gene_symbol":"TGFA","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000163235"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":127,"mucinous_within_mss_proxy_log2_median_ratio":41},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":134.3849,"q25_rsem":69.38585,"q75_rsem":199.38395,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":60.0782,"q25_rsem":31.555475,"q75_rsem":135.924425,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":88.6014,"q25_rsem":35.5628,"q75_rsem":159.248,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":62.57335,"q25_rsem":31.745225,"q75_rsem":129.031675,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":65.4432,"q25_rsem":31.8257,"q75_rsem":126.881,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.121464,"mucinous_within_mss_proxy_log2_median_ratio":0.495099},"entrez_gene_id":7292,"gene_symbol":"TNFSF4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000117586"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":179,"mucinous_within_mss_proxy_log2_median_ratio":93},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.0,"expected_sample_count":2,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.377778,"expected_sample_count":92,"median_rsem":0.0,"q25_rsem":-0.4645,"q75_rsem":0.494875,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.513514,"expected_sample_count":37,"median_rsem":0.1351,"q25_rsem":-0.0246,"q75_rsem":1.4118,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.356164,"expected_sample_count":440,"median_rsem":0.0,"q25_rsem":-0.4645,"q75_rsem":0.45815,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.366234,"expected_sample_count":385,"median_rsem":0.0,"q25_rsem":-0.4645,"q75_rsem":0.4831,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.0,"mucinous_within_mss_proxy_log2_median_ratio":0.182819},"entrez_gene_id":2066,"gene_symbol":"ERBB4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000178568"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":12,"mucinous_within_mss_proxy_log2_median_ratio":159},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":448.7115,"q25_rsem":399.25975,"q75_rsem":498.16325,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":622.3745,"q25_rsem":290.029,"q75_rsem":925.70635,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":439.871,"q25_rsem":239.5425,"q75_rsem":617.745,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":560.38,"q25_rsem":332.41205,"q75_rsem":918.904225,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":526.01,"q25_rsem":332.6042,"q75_rsem":912.246,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.242269,"mucinous_within_mss_proxy_log2_median_ratio":-0.348621},"entrez_gene_id":2261,"gene_symbol":"FGFR3","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000068078"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":172,"mucinous_within_mss_proxy_log2_median_ratio":65},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":128.4291,"q25_rsem":70.42915,"q75_rsem":186.42905,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":26.6487,"q25_rsem":14.31805,"q75_rsem":49.8714,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":40.9431,"q25_rsem":22.5922,"q75_rsem":163.107,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":32.2967,"q25_rsem":16.2347,"q75_rsem":75.393625,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":34.6927,"q25_rsem":16.9677,"q75_rsem":79.8615,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.368417,"mucinous_within_mss_proxy_log2_median_ratio":0.333054},"entrez_gene_id":2719,"gene_symbol":"GPC3","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000147257"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":165,"mucinous_within_mss_proxy_log2_median_ratio":40},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":168.6258,"q25_rsem":86.1407,"q75_rsem":251.1109,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":42.72155,"q25_rsem":24.4226,"q75_rsem":79.44985,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":69.5866,"q25_rsem":38.0088,"q75_rsem":126.969,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.997717,"expected_sample_count":440,"median_rsem":48.96895,"q25_rsem":24.1659,"q75_rsem":96.818975,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.997403,"expected_sample_count":385,"median_rsem":52.3694,"q25_rsem":25.3021,"q75_rsem":101.749,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.287668,"mucinous_within_mss_proxy_log2_median_ratio":0.498362},"entrez_gene_id":10859,"gene_symbol":"LILRB1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000104972"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":181,"mucinous_within_mss_proxy_log2_median_ratio":181},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.0,"expected_sample_count":2,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.608696,"detected_fraction":0.035714,"expected_sample_count":92,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":56},"mss_proxy_mucinous":{"coverage_fraction":0.621622,"detected_fraction":0.043478,"expected_sample_count":37,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":23},"mss_proxy_nonmucinous":{"coverage_fraction":0.586364,"detected_fraction":0.05814,"expected_sample_count":440,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":258},"mss_proxy_other_site":{"coverage_fraction":0.584416,"detected_fraction":0.062222,"expected_sample_count":385,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":225}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.0,"mucinous_within_mss_proxy_log2_median_ratio":0.0},"entrez_gene_id":4142,"gene_symbol":"MAS1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000130368"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":183,"mucinous_within_mss_proxy_log2_median_ratio":183},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.5,"expected_sample_count":2,"median_rsem":3.1177,"q25_rsem":1.55885,"q75_rsem":4.67655,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.608696,"detected_fraction":0.089286,"expected_sample_count":92,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":56},"mss_proxy_mucinous":{"coverage_fraction":0.621622,"detected_fraction":0.130435,"expected_sample_count":37,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":23},"mss_proxy_nonmucinous":{"coverage_fraction":0.586364,"detected_fraction":0.093023,"expected_sample_count":440,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":258},"mss_proxy_other_site":{"coverage_fraction":0.584416,"detected_fraction":0.097778,"expected_sample_count":385,"median_rsem":0.0,"q25_rsem":0.0,"q75_rsem":0.0,"sample_count":225}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.0,"mucinous_within_mss_proxy_log2_median_ratio":0.0},"entrez_gene_id":6010,"gene_symbol":"RHO","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000163914"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":140,"mucinous_within_mss_proxy_log2_median_ratio":42},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3753.97,"q25_rsem":2058.67,"q75_rsem":5449.27,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1380.6701,"q25_rsem":974.78915,"q75_rsem":2117.8695,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2071.64,"q25_rsem":1420.63,"q75_rsem":2645.0572,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1475.0196,"q25_rsem":1030.378775,"q75_rsem":2083.48165,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1529.9452,"q25_rsem":1064.13,"q75_rsem":2136.6531,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.148009,"mucinous_within_mss_proxy_log2_median_ratio":0.489758},"entrez_gene_id":2022,"gene_symbol":"ENG","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000106991"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":50,"mucinous_within_mss_proxy_log2_median_ratio":127},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":477.814,"q25_rsem":305.805,"q75_rsem":649.823,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":504.4365,"q25_rsem":333.328,"q75_rsem":584.12765,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":488.625,"q25_rsem":379.7975,"q75_rsem":571.835,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":489.569,"q25_rsem":341.5261,"q75_rsem":629.80875,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":488.625,"q25_rsem":348.3899,"q75_rsem":637.003,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.045853,"mucinous_within_mss_proxy_log2_median_ratio":-0.002779},"entrez_gene_id":54567,"gene_symbol":"DLL4","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000128917"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":20,"mucinous_within_mss_proxy_log2_median_ratio":173},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1986.42,"q25_rsem":1619.055,"q75_rsem":2353.785,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1815.20935,"q25_rsem":1100.775,"q75_rsem":3080.15425,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":998.444,"q25_rsem":617.1628,"q75_rsem":1767.96,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1740.1866,"q25_rsem":931.45865,"q75_rsem":2967.14235,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1614.0086,"q25_rsem":861.919,"q75_rsem":2881.6252,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.169389,"mucinous_within_mss_proxy_log2_median_ratio":-0.800873},"entrez_gene_id":5754,"gene_symbol":"PTK7","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000112655"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":86,"mucinous_within_mss_proxy_log2_median_ratio":28},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":6143.1425,"q25_rsem":3190.01375,"q75_rsem":9096.27125,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1623.6646,"q25_rsem":820.86625,"q75_rsem":3558.3,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2527.1199,"q25_rsem":930.4369,"q75_rsem":4208.22,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1599.1834,"q25_rsem":804.85655,"q75_rsem":2989.38755,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1672.74,"q25_rsem":804.251,"q75_rsem":3058.78,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.042934,"mucinous_within_mss_proxy_log2_median_ratio":0.659828},"entrez_gene_id":84168,"gene_symbol":"ANTXR1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000169604"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":69,"mucinous_within_mss_proxy_log2_median_ratio":20},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1235.66115,"q25_rsem":618.561725,"q75_rsem":1852.760575,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":201.30935,"q25_rsem":94.524175,"q75_rsem":366.72975,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":354.341,"q25_rsem":147.7942,"q75_rsem":589.717,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":187.7815,"q25_rsem":83.50955,"q75_rsem":400.5526,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":201.717,"q25_rsem":85.0616,"q75_rsem":434.3969,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.002904,"mucinous_within_mss_proxy_log2_median_ratio":0.912487},"entrez_gene_id":2191,"gene_symbol":"FAP","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000078098"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":156,"mucinous_within_mss_proxy_log2_median_ratio":38},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":306.3688,"q25_rsem":194.8587,"q75_rsem":417.8789,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":101.9735,"q25_rsem":63.76565,"q75_rsem":187.698775,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":165.0731,"q25_rsem":81.3892,"q75_rsem":316.39,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":112.99475,"q25_rsem":72.9316,"q75_rsem":191.122125,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":118.27,"q25_rsem":75.1467,"q75_rsem":202.677,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.211958,"mucinous_within_mss_proxy_log2_median_ratio":0.542851},"entrez_gene_id":4345,"gene_symbol":"CD200","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000091972"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":90,"mucinous_within_mss_proxy_log2_median_ratio":85},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1012.9315,"q25_rsem":565.68725,"q75_rsem":1460.17575,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":415.6453,"q25_rsem":278.6975,"q75_rsem":604.966775,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":494.364,"q25_rsem":283.648,"q75_rsem":694.27,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":422.28205,"q25_rsem":255.39885,"q75_rsem":624.1105,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":430.7131,"q25_rsem":254.7522,"q75_rsem":635.655,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.051253,"mucinous_within_mss_proxy_log2_median_ratio":0.22687},"entrez_gene_id":558,"gene_symbol":"AXL","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000167601"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":135,"mucinous_within_mss_proxy_log2_median_ratio":69},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2203.9855,"q25_rsem":1157.55825,"q75_rsem":3250.41275,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":574.7004,"q25_rsem":377.509225,"q75_rsem":1450.9275,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":756.618,"q25_rsem":459.8365,"q75_rsem":1112.6655,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":609.04705,"q25_rsem":387.095625,"q75_rsem":1033.0715,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":633.4381,"q25_rsem":396.7529,"q75_rsem":1033.212,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.140161,"mucinous_within_mss_proxy_log2_median_ratio":0.31255},"entrez_gene_id":57124,"gene_symbol":"CD248","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000174807"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":105,"mucinous_within_mss_proxy_log2_median_ratio":137},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1209.5795,"q25_rsem":688.86925,"q75_rsem":1730.28975,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":491.195,"q25_rsem":329.641125,"q75_rsem":760.985,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":483.633,"q25_rsem":383.4815,"q75_rsem":846.589,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":518.064,"q25_rsem":339.61795,"q75_rsem":740.78525,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":517.954,"q25_rsem":353.457,"q75_rsem":748.815,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.076377,"mucinous_within_mss_proxy_log2_median_ratio":-0.09902},"entrez_gene_id":2321,"gene_symbol":"FLT1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000102755"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":171,"mucinous_within_mss_proxy_log2_median_ratio":35},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":12.1163,"q25_rsem":7.88595,"q75_rsem":16.34665,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.944444,"expected_sample_count":92,"median_rsem":4.66645,"q25_rsem":3.169,"q75_rsem":9.45945,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.945946,"expected_sample_count":37,"median_rsem":8.9457,"q25_rsem":4.9078,"q75_rsem":16.3021,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.956621,"expected_sample_count":440,"median_rsem":5.6905,"q25_rsem":3.143425,"q75_rsem":11.210675,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.958442,"expected_sample_count":385,"median_rsem":6.2035,"q25_rsem":3.3262,"q75_rsem":11.8712,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.346253,"mucinous_within_mss_proxy_log2_median_ratio":0.571959},"entrez_gene_id":2099,"gene_symbol":"ESR1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000091831"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":16,"mucinous_within_mss_proxy_log2_median_ratio":160},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":8607.35,"q25_rsem":8378.195,"q75_rsem":8836.505,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":12778.45,"q25_rsem":10096.75,"q75_rsem":14734.462025,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":9065.66,"q25_rsem":7969.93,"q75_rsem":10731.4053,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":11567.85,"q25_rsem":9288.4446,"q75_rsem":13928.2795,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":11110.7828,"q25_rsem":8825.08,"q75_rsem":13474.0424,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.201735,"mucinous_within_mss_proxy_log2_median_ratio":-0.351602},"entrez_gene_id":1499,"gene_symbol":"CTNNB1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000168036"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":130,"mucinous_within_mss_proxy_log2_median_ratio":7},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.5,"expected_sample_count":2,"median_rsem":1.87065,"q25_rsem":0.935325,"q75_rsem":2.805975,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.711111,"expected_sample_count":92,"median_rsem":0.45525,"q25_rsem":0.0,"q75_rsem":1.66835,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.783784,"expected_sample_count":37,"median_rsem":3.7413,"q25_rsem":0.3557,"q75_rsem":8.9457,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.650685,"expected_sample_count":440,"median_rsem":0.4816,"q25_rsem":0.0,"q75_rsem":1.9968,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.649351,"expected_sample_count":385,"median_rsem":0.5921,"q25_rsem":0.0,"q75_rsem":2.4722,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.129664,"mucinous_within_mss_proxy_log2_median_ratio":1.678127},"entrez_gene_id":10568,"gene_symbol":"SLC34A2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000157765"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":58,"mucinous_within_mss_proxy_log2_median_ratio":147},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":447.265,"q25_rsem":436.7565,"q75_rsem":457.7735,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":455.6295,"q25_rsem":382.02625,"q75_rsem":545.463,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":401.544,"q25_rsem":330.849,"q75_rsem":477.9293,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":455.6295,"q25_rsem":365.8648,"q75_rsem":542.26885,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":445.1051,"q25_rsem":359.174,"q75_rsem":536.2009,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.03364,"mucinous_within_mss_proxy_log2_median_ratio":-0.181878},"entrez_gene_id":6868,"gene_symbol":"ADAM17","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000151694"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":146,"mucinous_within_mss_proxy_log2_median_ratio":5},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":2299.3155,"q25_rsem":1326.14825,"q75_rsem":3272.48275,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":282.8925,"q25_rsem":77.723925,"q75_rsem":936.52585,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":952.5128,"q25_rsem":317.899,"q75_rsem":4245.65,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":282.4755,"q25_rsem":85.371,"q75_rsem":933.226,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":317.899,"q25_rsem":86.6256,"q75_rsem":1024.6992,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.167755,"mucinous_within_mss_proxy_log2_median_ratio":1.750028},"entrez_gene_id":768,"gene_symbol":"CA9","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000107159"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":178,"mucinous_within_mss_proxy_log2_median_ratio":19},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":832.4435,"q25_rsem":623.55025,"q75_rsem":1041.33675,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1199.995,"q25_rsem":266.63235,"q75_rsem":3506.46,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2927.39,"q25_rsem":1268.7,"q75_rsem":4582.2137,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1514.625,"q25_rsem":325.714075,"q75_rsem":4401.265,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1825.41,"q25_rsem":376.183,"q75_rsem":4447.11,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.604781,"mucinous_within_mss_proxy_log2_median_ratio":0.950195},"entrez_gene_id":9075,"gene_symbol":"CLDN2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000165376"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":31,"mucinous_within_mss_proxy_log2_median_ratio":139},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":0.5,"expected_sample_count":2,"median_rsem":0.62355,"q25_rsem":0.311775,"q75_rsem":0.935325,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.944444,"expected_sample_count":92,"median_rsem":3.89575,"q25_rsem":1.24835,"q75_rsem":12.529125,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.918919,"expected_sample_count":37,"median_rsem":3.2514,"q25_rsem":1.2113,"q75_rsem":9.8828,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.901826,"expected_sample_count":440,"median_rsem":3.619,"q25_rsem":1.03405,"q75_rsem":10.055425,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.893506,"expected_sample_count":385,"median_rsem":3.5465,"q25_rsem":0.9843,"q75_rsem":9.7107,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.106774,"mucinous_within_mss_proxy_log2_median_ratio":-0.119643},"entrez_gene_id":10683,"gene_symbol":"DLL3","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000090932"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":139,"mucinous_within_mss_proxy_log2_median_ratio":133},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":242.6156,"q25_rsem":153.4774,"q75_rsem":331.7538,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":120.607,"q25_rsem":64.984925,"q75_rsem":322.8465,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.972973,"expected_sample_count":37,"median_rsem":124.9565,"q25_rsem":61.8352,"q75_rsem":188.2633,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":131.4097,"q25_rsem":72.55005,"q75_rsem":239.009275,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.997403,"expected_sample_count":385,"median_rsem":133.734,"q25_rsem":74.3689,"q75_rsem":219.258,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.147888,"mucinous_within_mss_proxy_log2_median_ratio":-0.072083},"entrez_gene_id":5167,"gene_symbol":"ENPP1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000197594"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":1,"mucinous_within_mss_proxy_log2_median_ratio":163},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":79.72455,"q25_rsem":43.915325,"q75_rsem":115.533775,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.977778,"expected_sample_count":92,"median_rsem":31.2428,"q25_rsem":7.185475,"q75_rsem":106.945825,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.972973,"expected_sample_count":37,"median_rsem":17.0189,"q25_rsem":6.0331,"q75_rsem":151.343,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.974886,"expected_sample_count":440,"median_rsem":22.48605,"q25_rsem":5.1497,"q75_rsem":73.4309,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.974026,"expected_sample_count":385,"median_rsem":19.1891,"q25_rsem":5.0912,"q75_rsem":70.7125,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.6754,"mucinous_within_mss_proxy_log2_median_ratio":-0.382293},"entrez_gene_id":2348,"gene_symbol":"FOLR1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000110195"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":4,"mucinous_within_mss_proxy_log2_median_ratio":175},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":23.2863,"q25_rsem":13.1054,"q75_rsem":33.4672,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":80.7998,"q25_rsem":31.485825,"q75_rsem":267.999725,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":33.8284,"q25_rsem":8.6054,"q75_rsem":125.1606,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.997717,"expected_sample_count":440,"median_rsem":66.63195,"q25_rsem":23.3076,"q75_rsem":231.18675,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.997403,"expected_sample_count":385,"median_rsem":58.4295,"q25_rsem":21.7176,"q75_rsem":227.242,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.460918,"mucinous_within_mss_proxy_log2_median_ratio":-0.957441},"entrez_gene_id":3897,"gene_symbol":"L1CAM","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000198910"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":155,"mucinous_within_mss_proxy_log2_median_ratio":52},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1696.09825,"q25_rsem":869.617375,"q75_rsem":2522.579125,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":193.22285,"q25_rsem":100.968675,"q75_rsem":460.44775,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":285.9643,"q25_rsem":113.208,"q75_rsem":609.281,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":213.65755,"q25_rsem":110.429975,"q75_rsem":426.157,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":223.952,"q25_rsem":112.253,"q75_rsem":432.5682,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.211904,"mucinous_within_mss_proxy_log2_median_ratio":0.418834},"entrez_gene_id":131578,"gene_symbol":"LRRC15","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000172061"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":71,"mucinous_within_mss_proxy_log2_median_ratio":111},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1853.585,"q25_rsem":1442.7775,"q75_rsem":2264.3925,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1433.9011,"q25_rsem":1130.33925,"q75_rsem":1802.8544,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1524.7396,"q25_rsem":899.163,"q75_rsem":2405.8563,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1433.73155,"q25_rsem":1054.730975,"q75_rsem":1842.936025,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1439.6761,"q25_rsem":1034.956,"q75_rsem":1904.03,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.005795,"mucinous_within_mss_proxy_log2_median_ratio":0.088728},"entrez_gene_id":4486,"gene_symbol":"MST1R","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000164078"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":61,"mucinous_within_mss_proxy_log2_median_ratio":132},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":94.26265,"q25_rsem":47.862475,"q75_rsem":140.662825,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.988889,"expected_sample_count":92,"median_rsem":20.7789,"q25_rsem":10.065525,"q75_rsem":40.2858,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.945946,"expected_sample_count":37,"median_rsem":20.0046,"q25_rsem":11.3459,"q75_rsem":46.5804,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.986301,"expected_sample_count":440,"median_rsem":20.98435,"q25_rsem":9.06795,"q75_rsem":40.032975,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.981818,"expected_sample_count":385,"median_rsem":20.4679,"q25_rsem":8.8245,"q75_rsem":40.1312,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.02075,"mucinous_within_mss_proxy_log2_median_ratio":-0.065772},"entrez_gene_id":80380,"gene_symbol":"PDCD1LG2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000197646"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":85,"mucinous_within_mss_proxy_log2_median_ratio":154},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1594.74,"q25_rsem":1442.74,"q75_rsem":1746.74,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":1756.3282,"q25_rsem":1393.43,"q75_rsem":2213.467325,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1527.93,"q25_rsem":1284.77,"q75_rsem":1898.74,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":1808.0487,"q25_rsem":1409.6875,"q75_rsem":2265.648625,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":1801.97,"q25_rsem":1404.23,"q75_rsem":2248.9279,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.036992,"mucinous_within_mss_proxy_log2_median_ratio":-0.242709},"entrez_gene_id":5817,"gene_symbol":"PVR","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000073008"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":122,"mucinous_within_mss_proxy_log2_median_ratio":81},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":17.6744,"q25_rsem":10.29945,"q75_rsem":25.04935,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.977778,"expected_sample_count":92,"median_rsem":6.2626,"q25_rsem":4.10995,"q75_rsem":9.220325,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.972973,"expected_sample_count":37,"median_rsem":7.9859,"q25_rsem":5.0242,"q75_rsem":14.9146,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.968037,"expected_sample_count":440,"median_rsem":6.62225,"q25_rsem":3.717325,"q75_rsem":12.738925,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.966234,"expected_sample_count":385,"median_rsem":6.8399,"q25_rsem":3.6906,"q75_rsem":13.606,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.110349,"mucinous_within_mss_proxy_log2_median_ratio":0.237446},"entrez_gene_id":6752,"gene_symbol":"SSTR2","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000180616"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":18,"mucinous_within_mss_proxy_log2_median_ratio":9},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":13.0527,"q25_rsem":7.1499,"q75_rsem":18.9555,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":0.744444,"expected_sample_count":92,"median_rsem":1.256,"q25_rsem":0.09435,"q75_rsem":4.366475,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.918919,"expected_sample_count":37,"median_rsem":4.8446,"q25_rsem":1.1045,"q75_rsem":10.0617,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.689498,"expected_sample_count":440,"median_rsem":0.9112,"q25_rsem":0.0,"q75_rsem":3.9735,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.698701,"expected_sample_count":385,"median_rsem":0.9771,"q25_rsem":0.0,"q75_rsem":5.0403,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.190381,"mucinous_within_mss_proxy_log2_median_ratio":1.612626},"entrez_gene_id":79679,"gene_symbol":"VTCN1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000134258"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":2,"mucinous_within_mss_proxy_log2_median_ratio":179},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":630.3826,"q25_rsem":337.6389,"q75_rsem":923.1263,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":364.2814,"q25_rsem":116.91975,"q75_rsem":748.756,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":0.891892,"expected_sample_count":37,"median_rsem":10.5982,"q25_rsem":1.4907,"q75_rsem":46.4791,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":0.974886,"expected_sample_count":440,"median_rsem":300.61275,"q25_rsem":66.536925,"q75_rsem":678.06375,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":0.961039,"expected_sample_count":385,"median_rsem":227.997,"q25_rsem":34.9477,"q75_rsem":635.279,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.67368,"mucinous_within_mss_proxy_log2_median_ratio":-4.700725},"entrez_gene_id":58530,"gene_symbol":"LY6G6D","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000244355"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":169,"mucinous_within_mss_proxy_log2_median_ratio":114},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":149.4062,"q25_rsem":90.0423,"q75_rsem":208.7701,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":114.9425,"q25_rsem":78.01755,"q75_rsem":246.994,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":145.04,"q25_rsem":74.8637,"q75_rsem":203.9221,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":138.1785,"q25_rsem":78.7539,"q75_rsem":233.43965,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":144.259,"q25_rsem":78.419,"q75_rsem":225.211,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.325218,"mucinous_within_mss_proxy_log2_median_ratio":0.069427},"entrez_gene_id":10998,"gene_symbol":"SLC27A5","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000083807"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":144,"mucinous_within_mss_proxy_log2_median_ratio":26},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":6484.155,"q25_rsem":6298.9225,"q75_rsem":6669.3875,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2790.72125,"q25_rsem":1977.9237,"q75_rsem":4034.090375,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":4917.5,"q25_rsem":3849.7257,"q75_rsem":6655.02,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":3004.335,"q25_rsem":2089.645,"q75_rsem":4102.4375,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":3128.1778,"q25_rsem":2177.2313,"q75_rsem":4320.92,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.164629,"mucinous_within_mss_proxy_log2_median_ratio":0.710693},"entrez_gene_id":51474,"gene_symbol":"LIMA1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000050405"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":34,"mucinous_within_mss_proxy_log2_median_ratio":170},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":3197.75,"q25_rsem":2718.76,"q75_rsem":3676.74,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":3450.51745,"q25_rsem":2377.024275,"q75_rsem":4761.8225,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2197.53,"q25_rsem":1673.2719,"q75_rsem":3934.49,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":3320.27385,"q25_rsem":2442.5165,"q75_rsem":4392.532075,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":3223.1421,"q25_rsem":2327.45,"q75_rsem":4310.66,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.098315,"mucinous_within_mss_proxy_log2_median_ratio":-0.595197},"entrez_gene_id":8473,"gene_symbol":"OGT","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000147162"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":68,"mucinous_within_mss_proxy_log2_median_ratio":124},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":6493.955,"q25_rsem":5920.4225,"q75_rsem":7067.4875,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":8306.945,"q25_rsem":6374.0487,"q75_rsem":9888.39,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":8436.9,"q25_rsem":7459.7996,"q75_rsem":9503.07,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":8306.945,"q25_rsem":6699.83315,"q75_rsem":9673.50345,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":8322.8472,"q25_rsem":6904.1,"q75_rsem":9600.0,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.002759,"mucinous_within_mss_proxy_log2_median_ratio":0.022392},"entrez_gene_id":1500,"gene_symbol":"CTNND1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000198561"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":49,"mucinous_within_mss_proxy_log2_median_ratio":138},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1703.05,"q25_rsem":1680.99,"q75_rsem":1725.11,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":2940.8477,"q25_rsem":2271.73645,"q75_rsem":3845.458575,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":2667.51,"q25_rsem":2081.4554,"q75_rsem":3109.837,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":2893.83,"q25_rsem":2275.18,"q75_rsem":3658.1725,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":2842.03,"q25_rsem":2268.49,"q75_rsem":3531.5884,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.049293,"mucinous_within_mss_proxy_log2_median_ratio":-0.117444},"entrez_gene_id":6714,"gene_symbol":"SRC","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000197122"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":88,"mucinous_within_mss_proxy_log2_median_ratio":36},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":581.9435,"q25_rsem":411.93925,"q75_rsem":751.94775,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":302.1063,"q25_rsem":198.42375,"q75_rsem":498.0088,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":451.386,"q25_rsem":299.52,"q75_rsem":766.134,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":303.382,"q25_rsem":201.503725,"q75_rsem":489.694125,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":312.67,"q25_rsem":210.234,"q75_rsem":500.9015,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.049424,"mucinous_within_mss_proxy_log2_median_ratio":0.571671},"entrez_gene_id":81607,"gene_symbol":"NECTIN4","joint_phenotype_ranking_eligible":false,"target_id":"T-NECTIN4"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":150,"mucinous_within_mss_proxy_log2_median_ratio":37},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":322.5995,"q25_rsem":175.55675,"q75_rsem":469.64225,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":83.5277,"q25_rsem":56.9509,"q75_rsem":124.44675,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":134.766,"q25_rsem":59.9188,"q75_rsem":209.815,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":91.95685,"q25_rsem":61.3834,"q75_rsem":150.16775,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":94.4115,"q25_rsem":61.3383,"q75_rsem":157.375,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.174739,"mucinous_within_mss_proxy_log2_median_ratio":0.546489},"entrez_gene_id":11178,"gene_symbol":"LZTS1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000061337"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":94,"mucinous_within_mss_proxy_log2_median_ratio":34},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":1508.7995,"q25_rsem":812.52425,"q75_rsem":2205.07475,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":534.7493,"q25_rsem":272.7024,"q75_rsem":851.9606,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":803.4644,"q25_rsem":550.6757,"q75_rsem":1126.52,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":532.7798,"q25_rsem":319.861075,"q75_rsem":831.682775,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":560.342,"q25_rsem":328.848,"q75_rsem":873.197,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.067322,"mucinous_within_mss_proxy_log2_median_ratio":0.591784},"entrez_gene_id":10123,"gene_symbol":"ARL4C","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000188042"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":60,"mucinous_within_mss_proxy_log2_median_ratio":103},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":71.36505,"q25_rsem":50.305075,"q75_rsem":92.425025,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":37.70645,"q25_rsem":22.7204,"q75_rsem":58.87965,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":40.3532,"q25_rsem":26.3715,"q75_rsem":109.524,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":36.8651,"q25_rsem":19.224175,"q75_rsem":69.065925,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":37.0144,"q25_rsem":17.7786,"q75_rsem":71.8535,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.026028,"mucinous_within_mss_proxy_log2_median_ratio":0.12713},"entrez_gene_id":5294,"gene_symbol":"PIK3CG","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000105851"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":131,"mucinous_within_mss_proxy_log2_median_ratio":48},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":982.3845,"q25_rsem":821.66175,"q75_rsem":1143.10725,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":710.9675,"q25_rsem":552.7455,"q75_rsem":938.887075,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":1019.031,"q25_rsem":815.6188,"q75_rsem":1225.56,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":750.31,"q25_rsem":563.48055,"q75_rsem":976.918075,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":778.314,"q25_rsem":577.002,"q75_rsem":1013.4155,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.130393,"mucinous_within_mss_proxy_log2_median_ratio":0.441133},"entrez_gene_id":57534,"gene_symbol":"MIB1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000101752"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":48,"mucinous_within_mss_proxy_log2_median_ratio":97},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":634.4265,"q25_rsem":425.05475,"q75_rsem":843.79825,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":747.7338,"q25_rsem":471.1286,"q75_rsem":1196.6496,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":811.525,"q25_rsem":441.5178,"q75_rsem":1154.64,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":720.3175,"q25_rsem":457.85805,"q75_rsem":1069.638375,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":722.271,"q25_rsem":455.1029,"q75_rsem":1061.5907,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":0.049917,"mucinous_within_mss_proxy_log2_median_ratio":0.171778},"entrez_gene_id":3667,"gene_symbol":"IRS1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000169047"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":96,"mucinous_within_mss_proxy_log2_median_ratio":86},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":846.143,"q25_rsem":813.722,"q75_rsem":878.564,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":766.56445,"q25_rsem":666.21,"q75_rsem":916.51045,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":921.6367,"q25_rsem":804.461,"q75_rsem":1084.18,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":788.90025,"q25_rsem":670.239325,"q75_rsem":919.75325,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":804.461,"q25_rsem":688.452,"q75_rsem":934.78,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.069527,"mucinous_within_mss_proxy_log2_median_ratio":0.224092},"entrez_gene_id":8737,"gene_symbol":"RIPK1","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000137275"},{"axis_ranks":{"left_site_within_mss_proxy_log2_median_ratio":149,"mucinous_within_mss_proxy_log2_median_ratio":73},"cohorts":{"joint_mss_proxy_mucinous_left":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":2,"median_rsem":294.9905,"q25_rsem":234.47975,"q75_rsem":355.50125,"sample_count":2},"mss_proxy_left_colorectal":{"coverage_fraction":0.978261,"detected_fraction":1.0,"expected_sample_count":92,"median_rsem":200.38175,"q25_rsem":99.0216,"q75_rsem":315.39955,"sample_count":90},"mss_proxy_mucinous":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":37,"median_rsem":261.12,"q25_rsem":214.476,"q75_rsem":343.075,"sample_count":37},"mss_proxy_nonmucinous":{"coverage_fraction":0.995455,"detected_fraction":1.0,"expected_sample_count":440,"median_rsem":213.3992,"q25_rsem":117.837875,"q75_rsem":314.90575,"sample_count":438},"mss_proxy_other_site":{"coverage_fraction":1.0,"detected_fraction":1.0,"expected_sample_count":385,"median_rsem":226.039,"q25_rsem":123.677,"q75_rsem":318.7796,"sample_count":385}},"comparison_axes":{"left_site_within_mss_proxy_log2_median_ratio":-0.173007,"mucinous_within_mss_proxy_log2_median_ratio":0.289928},"entrez_gene_id":29760,"gene_symbol":"BLNK","joint_phenotype_ranking_eligible":false,"target_id":"T-ENSG00000095585"}],"schema_version":"codex-surface-cbioportal-phenotype-overlay/v0.1","source":{"canonical_url":"https://www.cbioportal.org/study/summary?id=coadread_tcga_pan_can_atlas_2018","database":"cBioPortal","measurement":"batch-normalized RNA Seq V2 RSEM","molecular_profile_id":"coadread_tcga_pan_can_atlas_2018_rna_seq_v2_mrna","snapshots":{"expression":{"bytes":40680705,"sha256":"40ed96303dd4e758435d5bc4163727da8fdca8f077c15f3c771e33c859befefe"},"genes":{"bytes":13069,"sha256":"1969e84360719c52b9ccdf4d053b4e02f9c93b3eb3b7ccb50ba27180ff70b8c4"},"patient_clinical":{"bytes":5844177,"sha256":"02f88288361cf74f0649c43c1a29fb95274ad1fef1bbdfbd60f778944a0923ac"},"sample_clinical":{"bytes":6282524,"sha256":"119b040f543c3063ffd2a94d9005c5d00a0becdeeeb0be6d1a6042978e4727a5"}},"study_id":"coadread_tcga_pan_can_atlas_2018","study_name":"Colorectal Adenocarcinoma (TCGA, PanCancer Atlas)"},"unresolved":[{"gene_symbol":"PVRL2","reason":"no cBioPortal gene mapping","target_id":"T-ENSG00000130202"}]}
