{"atlas_id":"pmmr-mucinous-colon","claim_ceiling":"computational-screening-hypothesis","confirmation_contexts":[{"all_confirmation_gates_pass":true,"completed_confirmation_count":5,"interpretation":"The deposited-ligand control is used to qualify redocking geometry, and the noncognate set provides same-site scoring context. Candidate confirmation tests repeatability within one Smina/Vinardo protocol. These controls do not convert docking scores into affinity, selectivity, or efficacy.","noncognate_controls":[{"molecule_id":"RF008","seed_top_scores_kcal_mol":[-6.61211,-6.60802,-6.60709],"top_score_span_kcal_mol":0.00502},{"molecule_id":"RF013","seed_top_scores_kcal_mol":[-9.92397,-9.39081,-9.72812],"top_score_span_kcal_mol":0.53316},{"molecule_id":"RF016","seed_top_scores_kcal_mol":[-9.7093,-9.43595,-9.97109],"top_score_span_kcal_mol":0.53514},{"molecule_id":"RF019","seed_top_scores_kcal_mol":[-9.9102,-9.85536,-9.39943],"top_score_span_kcal_mol":0.51077}],"passed_confirmation_count":5,"positive_control":{"confirmation_seed_top_scores_kcal_mol":[-11.28728,-11.27643,-11.33917],"geometry_gate":"must pass validate_smina_screen.py --require-positive-control before closeout","molecule_id":"RF020","top_score_span_kcal_mol":0.06274},"run_id":"fap-6y0f-defined-pocket-screen-v1","screen_id":"FAP-6Y0F-356-smina-v1","selected_molecule_count":5},{"all_confirmation_gates_pass":true,"completed_confirmation_count":5,"interpretation":"The deposited-ligand control is used to qualify redocking geometry, and the noncognate set provides same-site scoring context. Candidate confirmation tests repeatability within one Smina/Vinardo protocol. These controls do not convert docking scores into affinity, selectivity, or efficacy.","noncognate_controls":[{"molecule_id":"RF013","seed_top_scores_kcal_mol":[-8.12624,-7.94112,-7.96375],"top_score_span_kcal_mol":0.18512},{"molecule_id":"RF014","seed_top_scores_kcal_mol":[-10.06269,-9.93472,-10.13668],"top_score_span_kcal_mol":0.20196},{"molecule_id":"RF015","seed_top_scores_kcal_mol":[20.65954,23.66153,24.35214],"top_score_span_kcal_mol":3.6926},{"molecule_id":"RF016","seed_top_scores_kcal_mol":[-11.25993,-11.65294,-11.68026],"top_score_span_kcal_mol":0.42033}],"passed_confirmation_count":5,"positive_control":{"confirmation_seed_top_scores_kcal_mol":[-12.68723,-12.6988,-12.71832],"geometry_gate":"must pass validate_smina_screen.py --require-positive-control before closeout","molecule_id":"RF019","top_score_span_kcal_mol":0.03109},"run_id":"nt5e-9r0g-defined-pocket-screen-v1","screen_id":"NT5E-9R0G-A1JCG-smina-v1","selected_molecule_count":5}],"input_collections":[{"bytes":386594,"input_ordinal":1,"path_label":"fap.json","sha256":"9605770f93a71e4d3b48b90ed3463038508168ace52cf5b89d6cf8afaf60ce15"},{"bytes":371953,"input_ordinal":2,"path_label":"nt5e.json","sha256":"e72e4c89e76ba735d582df8d97d968848bc9fefa6d3ac966e9cdd2d7a2477f12"}],"normalized_at":"2026-09-04","records":[{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":2306,"role":"request-spec","sha256":"2b3756a881f28068603dbb334b4a1811890d39eca5ed8c4bcaa8bf07f74edfde","storage":"external-artifact-root"},{"bytes":3486,"role":"prepared-ligand-input","sha256":"ccaeb459d18a8ab99f5dc3d5db210679694169ebdd1559bac6c6e5a114799470","storage":"external-artifact-root"},{"bytes":8390,"role":"execution-receipt","sha256":"4ea47603db6eeb05a6cbeb0a598cb8d6520e151fab58a5d0709fa423311a3aa8","storage":"external-artifact-root"},{"bytes":31152,"role":"pose-ensemble-sdf","sha256":"049718ccf0b5920f480e24ad4f2fb800317c15590b3cc7d73f9a430091614d0f","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"dbc94a7efe73eddd42079760c5e396d090ff1a1ed1b480957c6c0e7e8118d68c","storage":"external-artifact-root"},{"bytes":2342,"role":"request-spec","sha256":"d58ad0abc9fe859720724b484cc19d02df9fad75cd1aa6b456b9e730476d8cb2","storage":"external-artifact-root"},{"bytes":12176,"role":"execution-receipt","sha256":"0f19fbd0a874f0be152b4c2381ab08f9671b9083347ea28db72adfd28c01faf3","storage":"external-artifact-root"},{"bytes":31152,"role":"pose-ensemble-sdf","sha256":"226deaa5f6d10660cf31d4407d47b7c185f53ecfec665d51ef8e992c10de10b4","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"277b8e4bcc0cab71fc26bc67018807eb426a2e02ff790aeef2cdc756db604833","storage":"external-artifact-root"},{"bytes":31153,"role":"pose-ensemble-sdf","sha256":"a1a334042e55fc8e1d25bde527fbaaec498ec37b586eb4f7520f8673478f2eed","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"5204fdc36e3537308f91c55546445c8c7c8457b9324963111a854cc7037f0921","storage":"external-artifact-root"},{"bytes":31153,"role":"pose-ensemble-sdf","sha256":"dc8c31042e41165bffa69aad836d8fce58a59254193aa5a2543f54b8b192ed28","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"e30b9dd9c8afd4a4ff507878bbce8297315ba547be98cacc00f95f27fd66fd4e","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-11.33917,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"positive-control","control_type":"positive-control","docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"xanthine-derivative","molecule_id":"RF020","molecule_input_sha256":"ccaeb459d18a8ab99f5dc3d5db210679694169ebdd1559bac6c6e5a114799470","molecule_name":"Linagliptin","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/positive-control-confirmation/RF020_seed47/RF020_seed47.sdf","pose_id":"RF020-seed47-mode1","pose_score":-11.33917,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3486,"role":"prepared-ligand-input","sha256":"ccaeb459d18a8ab99f5dc3d5db210679694169ebdd1559bac6c6e5a114799470","storage":"external-artifact-root"},"identity_relation":"deposited-component-matches-library-identity","inchikey":"LTXREWYXXSTFRX-QGZVFWFLSA-N","microstate":{"protonation":"PDB chemical component definition; crystallographic hydrogens absent","state":"deposited-chemical-component","tautomer":"PDB chemical component definition"},"prepared_inchikey":"LTXREWYXXSTFRX-QGZVFWFLSA-N","state":"deposited-crystal-heavy-atom-conformer"},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"positive-control","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-RF020","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-11.300959999999998,"median_top_score_kcal_mol":-11.28728,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":32,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"positive-control-confirmation\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.03353257669789146,"top_score_span_kcal_mol":0.0627399999999998},"seed_observations":[{"affinities_kcal_mol":[-11.25476,-10.81056,-10.37115,-9.75335,-9.39745,-9.35372,-9.20228,-9.17499,-9.04254],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":8,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":31152,"role":"pose-ensemble-sdf","sha256":"049718ccf0b5920f480e24ad4f2fb800317c15590b3cc7d73f9a430091614d0f","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":8,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"positive-control-canary\"}","returncode":0,"seed":1,"stage_id":"positive-control-canary","top_vinardo_score_kcal_mol":-11.25476},{"affinities_kcal_mol":[-11.28728,-10.88009,-10.34756,-9.78942,-9.68695,-9.58568,-9.49324,-9.39726,-9.30959],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":32,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":31152,"role":"pose-ensemble-sdf","sha256":"226deaa5f6d10660cf31d4407d47b7c185f53ecfec665d51ef8e992c10de10b4","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":32,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"positive-control-confirmation\"}","returncode":0,"seed":11,"stage_id":"positive-control-confirmation","top_vinardo_score_kcal_mol":-11.28728},{"affinities_kcal_mol":[-11.27643,-10.85705,-10.39616,-10.3371,-9.92794,-9.78772,-9.58317,-9.43332,-9.40572],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":32,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":31153,"role":"pose-ensemble-sdf","sha256":"a1a334042e55fc8e1d25bde527fbaaec498ec37b586eb4f7520f8673478f2eed","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":32,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"positive-control-confirmation\"}","returncode":0,"seed":29,"stage_id":"positive-control-confirmation","top_vinardo_score_kcal_mol":-11.27643},{"affinities_kcal_mol":[-11.33917,-10.94675,-10.57792,-10.4181,-9.84472,-9.69038,-9.66296,-9.55012,-9.4824],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":32,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":31153,"role":"pose-ensemble-sdf","sha256":"dc8c31042e41165bffa69aad836d8fce58a59254193aa5a2543f54b8b192ed28","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":32,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"positive-control-confirmation\"}","returncode":0,"seed":47,"stage_id":"positive-control-confirmation","top_vinardo_score_kcal_mol":-11.33917}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":2337,"role":"request-spec","sha256":"443831bdc4ab113b21f35e6fbaee786a876687a7db4bbdd0ad66dbe5b08b2007","storage":"external-artifact-root"},{"bytes":1861,"role":"prepared-ligand-input","sha256":"691d3d71c1704e1c0ca64f0011e72f9315152261e36c1c5d2f1927ea59ae69e5","storage":"external-artifact-root"},{"bytes":12159,"role":"execution-receipt","sha256":"bd029f8af024a5db2a920a3b8b421fab0747161c07967a87dbf7d6d87a5fad52","storage":"external-artifact-root"},{"bytes":13644,"role":"pose-ensemble-sdf","sha256":"1ab744edf12644624ed4b59ae04584e340bc738394c7721fbb95b61c320e957d","storage":"external-artifact-root"},{"bytes":2523,"role":"smina-log","sha256":"6c8bfc2aff46c4faa8242d683c0105791b287ab92fe65cc3436ffa76989b746d","storage":"external-artifact-root"},{"bytes":13644,"role":"pose-ensemble-sdf","sha256":"20eba8682ef9138525658ba5aeeb8c0bb5dd518689ce13697feb830cf8d21b32","storage":"external-artifact-root"},{"bytes":2523,"role":"smina-log","sha256":"b0f1db130db5fba4d9aa649afd03ba75d6f2cbaa1dfb2279c0c9524b1d331053","storage":"external-artifact-root"},{"bytes":13644,"role":"pose-ensemble-sdf","sha256":"8df3ae6e024e74b012ab8b3905db640eed1dd3669a5439860361e974a0f8b1a9","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"bdd475d44a3c03c34857e973d12fbb22b07de0fd4205da9055646157bf65869f","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-6.61211,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"noncognate-control","control_type":"noncognate-control","docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"sulfonamide","molecule_id":"RF008","molecule_input_sha256":"691d3d71c1704e1c0ca64f0011e72f9315152261e36c1c5d2f1927ea59ae69e5","molecule_name":"Acetazolamide","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/noncognate-controls/rf008/RF008_seed11/RF008_seed11.sdf","pose_id":"RF008-seed11-mode1","pose_score":-6.61211,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":3,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":1861,"role":"prepared-ligand-input","sha256":"691d3d71c1704e1c0ca64f0011e72f9315152261e36c1c5d2f1927ea59ae69e5","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":860970680},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"BZKPWHYZMXOIDC-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"BZKPWHYZMXOIDC-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"noncognate-control","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-RF008","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-6.609073333333334,"median_top_score_kcal_mol":-6.60802,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.002670624146774309,"top_score_span_kcal_mol":0.0050200000000000244},"seed_observations":[{"affinities_kcal_mol":[-6.61211,-5.79106,-5.32601,-5.20126,-5.19565,-5.14298,-5.0524,-5.05226,-4.96073],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":13644,"role":"pose-ensemble-sdf","sha256":"1ab744edf12644624ed4b59ae04584e340bc738394c7721fbb95b61c320e957d","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":11,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-6.61211},{"affinities_kcal_mol":[-6.60802,-5.71324,-5.36265,-5.36199,-5.33581,-5.19648,-5.19059,-5.14405,-5.09779],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":13644,"role":"pose-ensemble-sdf","sha256":"20eba8682ef9138525658ba5aeeb8c0bb5dd518689ce13697feb830cf8d21b32","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":29,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-6.60802},{"affinities_kcal_mol":[-6.60709,-5.72553,-5.50334,-5.37064,-5.32303,-5.18952,-5.09803,-5.09114,-4.96851],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":13644,"role":"pose-ensemble-sdf","sha256":"8df3ae6e024e74b012ab8b3905db640eed1dd3669a5439860361e974a0f8b1a9","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":47,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-6.60709}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":3,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":2337,"role":"request-spec","sha256":"03e6ea1eb324317b91ac85bb1e12f3bdaf0539a65f2c7f09091f35835097e9a0","storage":"external-artifact-root"},{"bytes":7170,"role":"prepared-ligand-input","sha256":"d6d1c4dcc082824f806fd9964c6572633ae91946f25ca09fe8ca094db7e44e23","storage":"external-artifact-root"},{"bytes":12162,"role":"execution-receipt","sha256":"0d76c111d4d4ec3fe2b2919f5f3d59fc8fd902b23b4802492b3464573a6fd1ac","storage":"external-artifact-root"},{"bytes":41850,"role":"pose-ensemble-sdf","sha256":"261b867b9a04dc83d1dd75071cddd54e8b927dc66e0d77256a72321ae9584230","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"94c8fdf8ae1a6359647bfb0707164c362194b40c5ecc24acb2e5072aa83fe36f","storage":"external-artifact-root"},{"bytes":41850,"role":"pose-ensemble-sdf","sha256":"9f4d2c179d9d9254bd22a5518e590688e7c4704c68d374ea66ad4c7947c96248","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"c7e74dfb775ac1b5add2eb9309c8304dc3c2aa017d5cbd8508ef1d2b52132752","storage":"external-artifact-root"},{"bytes":41850,"role":"pose-ensemble-sdf","sha256":"54a7b263e488325c3770f4356efa195ea6a10caa9e982c27638805e809d17a48","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"733704634c8183b7e7d4b9922a556308c51ece3c1de5c54d2abe5f4a7c03ebd5","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.92397,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"noncognate-control","control_type":"noncognate-control","docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"cyclic-peptide","molecule_id":"RF013","molecule_input_sha256":"d6d1c4dcc082824f806fd9964c6572633ae91946f25ca09fe8ca094db7e44e23","molecule_name":"Cilengitide","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/noncognate-controls/rf013/RF013_seed11/RF013_seed11.sdf","pose_id":"RF013-seed11-mode1","pose_score":-9.92397,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":3,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":7170,"role":"prepared-ligand-input","sha256":"d6d1c4dcc082824f806fd9964c6572633ae91946f25ca09fe8ca094db7e44e23","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1847742512},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"AMLYAMJWYAIXIA-VWNVYAMZSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"AMLYAMJWYAIXIA-VWNVYAMZSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"noncognate-control","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-RF013","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.680966666666668,"median_top_score_kcal_mol":-9.72812,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.2696895882924172,"top_score_span_kcal_mol":0.5331600000000005},"seed_observations":[{"affinities_kcal_mol":[-9.92397,-9.32166,-9.30247,-9.23032,-9.18452,-8.99869,-8.94333,-8.74422,-8.49051],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":41850,"role":"pose-ensemble-sdf","sha256":"261b867b9a04dc83d1dd75071cddd54e8b927dc66e0d77256a72321ae9584230","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":11,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-9.92397},{"affinities_kcal_mol":[-9.39081,-8.85471,-8.69996,-8.55895,-8.50819,-8.42645,-8.34981,-7.98494,-7.93877],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":41850,"role":"pose-ensemble-sdf","sha256":"9f4d2c179d9d9254bd22a5518e590688e7c4704c68d374ea66ad4c7947c96248","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":29,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-9.39081},{"affinities_kcal_mol":[-9.72812,-9.23144,-9.14623,-9.14512,-8.89674,-8.84429,-8.80204,-8.65213,-8.50861],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":41850,"role":"pose-ensemble-sdf","sha256":"54a7b263e488325c3770f4356efa195ea6a10caa9e982c27638805e809d17a48","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":47,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-9.72812}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":3,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":2337,"role":"request-spec","sha256":"7d1671d47f02be960de0b7d38a3031265f04e896b3c79a8d06b2ef6b6b710f9f","storage":"external-artifact-root"},{"bytes":5317,"role":"prepared-ligand-input","sha256":"576935ea9811e88341ff624d02eabdb7c7a162f72bfdda359dae0be49d8c13bf","storage":"external-artifact-root"},{"bytes":12158,"role":"execution-receipt","sha256":"ac74e52fcbc4711bc7efc68c21a668e94756ab8e10881e50a122bc0412b96b9d","storage":"external-artifact-root"},{"bytes":27603,"role":"pose-ensemble-sdf","sha256":"e311c37f5974ebf1c305260e8025b3a7b6874e0d0f3d2f4a0b935dc561416c78","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"29a934a3231160ba40468e548d15133b89bced20b8502bf7e4b45e85b29893e5","storage":"external-artifact-root"},{"bytes":27603,"role":"pose-ensemble-sdf","sha256":"a482e4f98fa66564b67381d0727843291ae80673ec12a6e834e3674e15abeae0","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"3c3f4db491c620a1f3bf5d781b1255b8e53ed8eac1eb013a1d4dc62b80e9e236","storage":"external-artifact-root"},{"bytes":27603,"role":"pose-ensemble-sdf","sha256":"02dd533e0fec3e1716b25c523ef7178530259423826e83f6aa834b69d73ddbba","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"a6e74b6156304078c7d2980b0f3e472a38b702ce1e90252b39799f54614562c8","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.97109,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"noncognate-control","control_type":"noncognate-control","docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"small-molecule","molecule_id":"RF016","molecule_input_sha256":"576935ea9811e88341ff624d02eabdb7c7a162f72bfdda359dae0be49d8c13bf","molecule_name":"BMS-202","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/noncognate-controls/rf016/RF016_seed47/RF016_seed47.sdf","pose_id":"RF016-seed47-mode1","pose_score":-9.97109,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":3,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":5317,"role":"prepared-ligand-input","sha256":"576935ea9811e88341ff624d02eabdb7c7a162f72bfdda359dae0be49d8c13bf","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1902541988},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"JEDPSOYOYVELLZ-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"JEDPSOYOYVELLZ-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"noncognate-control","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-RF016","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.705446666666667,"median_top_score_kcal_mol":-9.7093,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.26759080894779136,"top_score_span_kcal_mol":0.5351400000000002},"seed_observations":[{"affinities_kcal_mol":[-9.7093,-9.66246,-9.58962,-9.46631,-9.36936,-9.30269,-9.25429,-9.14108,-9.10892],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":27603,"role":"pose-ensemble-sdf","sha256":"e311c37f5974ebf1c305260e8025b3a7b6874e0d0f3d2f4a0b935dc561416c78","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":11,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-9.7093},{"affinities_kcal_mol":[-9.43595,-9.22244,-9.16076,-9.1322,-9.08612,-9.08097,-9.02213,-8.99815,-8.89272],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":27603,"role":"pose-ensemble-sdf","sha256":"a482e4f98fa66564b67381d0727843291ae80673ec12a6e834e3674e15abeae0","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":29,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-9.43595},{"affinities_kcal_mol":[-9.97109,-9.95944,-9.95374,-9.9259,-9.59816,-9.52819,-9.4518,-9.41503,-9.40253],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":27603,"role":"pose-ensemble-sdf","sha256":"02dd533e0fec3e1716b25c523ef7178530259423826e83f6aa834b69d73ddbba","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":47,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-9.97109}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":3,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":2337,"role":"request-spec","sha256":"b3a8403d9efa3b127ac6f8551f716e6ebece3b1fe0623e15573d9cd7116900aa","storage":"external-artifact-root"},{"bytes":5801,"role":"prepared-ligand-input","sha256":"a17962fb11e55667137e3360cf362f3a6557fbc97bc8d4517f884fb367825c0c","storage":"external-artifact-root"},{"bytes":12158,"role":"execution-receipt","sha256":"1853e62f07824dbdc2003d0b1ceaad850d67dd37df7f44a086591b80ae831dcf","storage":"external-artifact-root"},{"bytes":37557,"role":"pose-ensemble-sdf","sha256":"bb8ab2f1a6fab76b95ac29319ac3112a34d001e156a4c90d3e727f183be48508","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"9c14654e84dbdd5f85177e93b27b85cfb02d2eebd665b653ed43101f674e4830","storage":"external-artifact-root"},{"bytes":37557,"role":"pose-ensemble-sdf","sha256":"9f18059de61759693494d860fbac43a1803f4ddcfffaa563dc43d5adaf82161f","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"490ff0ffb53e85871518a463924c8d6f548850a44a82e35030ecb7fa44e0e1e9","storage":"external-artifact-root"},{"bytes":37557,"role":"pose-ensemble-sdf","sha256":"752d59ae0207f6c5d2965460da8ed30bded6d1d95c7b56cd447a53e89a5ccc4c","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"dcdbb5ccaf7e65d4fb219f03e3ef4b560145c1bcad21c8bc805dfdc49f65e58a","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.9102,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"noncognate-control","control_type":"noncognate-control","docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"nucleotide-analogue","molecule_id":"RF019","molecule_input_sha256":"a17962fb11e55667137e3360cf362f3a6557fbc97bc8d4517f884fb367825c0c","molecule_name":"CD73 compound 21 (PDB CCD A1JCG)","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/noncognate-controls/rf019/RF019_seed11/RF019_seed11.sdf","pose_id":"RF019-seed11-mode1","pose_score":-9.9102,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":3,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":5801,"role":"prepared-ligand-input","sha256":"a17962fb11e55667137e3360cf362f3a6557fbc97bc8d4517f884fb367825c0c","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":674429670},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"PVVWULAPDGYSNQ-XTKAHFKISA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"PVVWULAPDGYSNQ-XTKAHFKISA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"noncognate-control","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-RF019","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.721663333333334,"median_top_score_kcal_mol":-9.85536,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.2804061290937361,"top_score_span_kcal_mol":0.5107699999999991},"seed_observations":[{"affinities_kcal_mol":[-9.9102,-9.30509,-8.91519,-8.78773,-8.75632,-8.64169,-8.53459,-8.31297,-8.28709],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":37557,"role":"pose-ensemble-sdf","sha256":"bb8ab2f1a6fab76b95ac29319ac3112a34d001e156a4c90d3e727f183be48508","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":11,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-9.9102},{"affinities_kcal_mol":[-9.85536,-9.64353,-9.36104,-9.21438,-9.07401,-9.03895,-8.95161,-8.75861,-8.68137],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":37557,"role":"pose-ensemble-sdf","sha256":"9f18059de61759693494d860fbac43a1803f4ddcfffaa563dc43d5adaf82161f","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":29,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-9.85536},{"affinities_kcal_mol":[-9.39943,-9.37991,-9.05173,-8.99679,-8.83295,-8.82535,-8.7193,-8.63959,-8.4712],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":37557,"role":"pose-ensemble-sdf","sha256":"752d59ae0207f6c5d2965460da8ed30bded6d1d95c7b56cd447a53e89a5ccc4c","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":47,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-9.39943}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":3,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"44ad32bc6550d095b2f748b0940e41f3b7b252e69c7694d57e9e316c8a3b20b5","storage":"external-artifact-root"},{"bytes":4227,"role":"prepared-ligand-input","sha256":"8483619a629d5a7b34e9222725907329550c0159dcfeb5d5344c8585d875a35c","storage":"external-artifact-root"},{"bytes":14059,"role":"execution-receipt","sha256":"cb47ba5fa724dadc12dacba23e1cc002aed67a2cc6683090e10e98a38d42c430","storage":"external-artifact-root"},{"bytes":24228,"role":"pose-ensemble-sdf","sha256":"2ddba84bc9b8ef74420126883dd167b59e27db8192c5e95cf305d56bd1efb421","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"dd4cceebc2adc9e81d5ea30149adeab0adbcfba70daf29110bc772d6068c7953","storage":"external-artifact-root"},{"bytes":2353,"role":"request-spec","sha256":"0364012458bfb551c60f85bdd167ea533c33302ed8671029343a3334ae50be08","storage":"external-artifact-root"},{"bytes":12161,"role":"execution-receipt","sha256":"3238f59664a2111ef8e47a339acf648ad80ff2c6d2b8098bac0c390179bf4421","storage":"external-artifact-root"},{"bytes":24228,"role":"pose-ensemble-sdf","sha256":"28c24fc6c5d5161f1643e6e8731a3e838d05afc321eeed58f30db7715ea0e0c0","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"591c3fdd4727e6cd81b1f1e22a09f66844dfd83ee3d9398f47bd054468229a94","storage":"external-artifact-root"},{"bytes":24228,"role":"pose-ensemble-sdf","sha256":"bc831337ae77182b8153e2b8aff8b67ffd84424d91b25d626821512cc8ccb584","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"a8c3385e0d0a9375e6aebe4e41e53e51004e484cff8a95db731de6bff78b51a6","storage":"external-artifact-root"},{"bytes":24228,"role":"pose-ensemble-sdf","sha256":"c9061f6a36ad5f96d494c09a365e4223fe7252a02a69ccd2e2903ed200775949","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"3c5e5d6441695a09dc779b27ecd8fe5a7f63242d875a2cc1819994740baf6f69","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.63017,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":{"evidence_class":"computational-screening-hypothesis","interpretation":"Passing supports repeatable pose scoring and site occupancy under this one Smina/Vinardo protocol. It does not establish binding, affinity, selectivity, target inhibition, exposure, or therapeutic effect.","overall_gate_pass":true,"pose_geometry":{"all_top_poses_contact_declared_site":true,"all_top_poses_inside_declared_box":true,"all_top_poses_no_severe_clashes":true,"contact_persistence_gate_pass":true,"contacted_site_residue_union":["A:GLN539","A:GLY626","A:GLY735","A:HIS734","A:SER624","A:TRP621","A:TRP623","A:TYR541","A:TYR625","A:VAL540"],"contacted_site_residues_in_every_seed":["A:GLN539","A:GLY626","A:GLY735","A:HIS734","A:SER624","A:TRP621","A:TRP623","A:TYR541","A:TYR625","A:VAL540"],"geometry_gate_pass":true,"mean_pairwise_contact_jaccard":1.0,"minimum_pairwise_contact_jaccard":1.0,"per_seed":[{"contacted_site_residue_count":10,"contacted_site_residues":["A:GLN539","A:GLY626","A:GLY735","A:HIS734","A:SER624","A:TRP621","A:TRP623","A:TYR541","A:TYR625","A:VAL540"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":24228,"role":"pose-ensemble-sdf","sha256":"28c24fc6c5d5161f1643e6e8731a3e838d05afc321eeed58f30db7715ea0e0c0","storage":"external-artifact-root"},"seed":11,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-9.63017},{"contacted_site_residue_count":10,"contacted_site_residues":["A:GLN539","A:GLY626","A:GLY735","A:HIS734","A:SER624","A:TRP621","A:TRP623","A:TYR541","A:TYR625","A:VAL540"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":24228,"role":"pose-ensemble-sdf","sha256":"bc831337ae77182b8153e2b8aff8b67ffd84424d91b25d626821512cc8ccb584","storage":"external-artifact-root"},"seed":29,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-9.47693},{"contacted_site_residue_count":10,"contacted_site_residues":["A:GLN539","A:GLY626","A:GLY735","A:HIS734","A:SER624","A:TRP621","A:TRP623","A:TYR541","A:TYR625","A:VAL540"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":24228,"role":"pose-ensemble-sdf","sha256":"c9061f6a36ad5f96d494c09a365e4223fe7252a02a69ccd2e2903ed200775949","storage":"external-artifact-root"},"seed":47,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-9.44219}],"persistent_site_residue_count":10},"requested_seed_count":3,"score_repeatability":{"maximum_span_kcal_mol":1.0,"pass":true,"top_score_span_kcal_mol":0.18798},"state":"same-protocol-confirmation-passed","successful_seed_count":3},"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"polyphenol","molecule_id":"NP001","molecule_input_sha256":"8483619a629d5a7b34e9222725907329550c0159dcfeb5d5344c8585d875a35c","molecule_name":"Curcumin","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/promoted-set-replicate-docking/np001/NP001_seed11/NP001_seed11.sdf","pose_id":"NP001-seed11-mode1","pose_score":-9.63017,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":4227,"role":"prepared-ligand-input","sha256":"8483619a629d5a7b34e9222725907329550c0159dcfeb5d5344c8585d875a35c","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":766868418},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"VFLDPWHFBUODDF-FCXRPNKRSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"VFLDPWHFBUODDF-FCXRPNKRSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP001","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.51643,"median_top_score_kcal_mol":-9.47693,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.10002153568107211,"top_score_span_kcal_mol":0.1879799999999996},"seed_observations":[{"affinities_kcal_mol":[-9.46788,-9.43947,-9.40081,-9.39024,-9.30508,-9.11951,-9.03635,-8.89611,-8.83106],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":24228,"role":"pose-ensemble-sdf","sha256":"2ddba84bc9b8ef74420126883dd167b59e27db8192c5e95cf305d56bd1efb421","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-9.46788},{"affinities_kcal_mol":[-9.63017,-9.61869,-9.53375,-9.52382,-9.48814,-9.48144,-9.47302,-9.37298,-9.1357],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":24228,"role":"pose-ensemble-sdf","sha256":"28c24fc6c5d5161f1643e6e8731a3e838d05afc321eeed58f30db7715ea0e0c0","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":11,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-9.63017},{"affinities_kcal_mol":[-9.47693,-9.46126,-9.36191,-9.2989,-9.2797,-9.27105,-9.23344,-9.19203,-8.98314],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":24228,"role":"pose-ensemble-sdf","sha256":"bc831337ae77182b8153e2b8aff8b67ffd84424d91b25d626821512cc8ccb584","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":29,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-9.47693},{"affinities_kcal_mol":[-9.44219,-9.38018,-9.37952,-9.31707,-9.28024,-9.26495,-9.21905,-9.21523,-9.07902],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":24228,"role":"pose-ensemble-sdf","sha256":"c9061f6a36ad5f96d494c09a365e4223fe7252a02a69ccd2e2903ed200775949","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":47,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-9.44219}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"44ad32bc6550d095b2f748b0940e41f3b7b252e69c7694d57e9e316c8a3b20b5","storage":"external-artifact-root"},{"bytes":2712,"role":"prepared-ligand-input","sha256":"f8e5d8e745f58a58c5ee85a68fac966b0acc96c56fc1fed75b8f461715137f15","storage":"external-artifact-root"},{"bytes":14059,"role":"execution-receipt","sha256":"cb47ba5fa724dadc12dacba23e1cc002aed67a2cc6683090e10e98a38d42c430","storage":"external-artifact-root"},{"bytes":17019,"role":"pose-ensemble-sdf","sha256":"6738ef52d248ff2b134526de843bf92e2d3788edb70e29de1c0bb5a3259e2f4b","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"750f99fcfd47e9bd40cff6d37e23301041b96b44492e63ef98b2a4f914a5e214","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-8.43453,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"stilbenoid","molecule_id":"NP002","molecule_input_sha256":"f8e5d8e745f58a58c5ee85a68fac966b0acc96c56fc1fed75b8f461715137f15","molecule_name":"trans-Resveratrol","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-01/NP002_seed41/NP002_seed41.sdf","pose_id":"NP002-seed41-mode1","pose_score":-8.43453,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2712,"role":"prepared-ligand-input","sha256":"f8e5d8e745f58a58c5ee85a68fac966b0acc96c56fc1fed75b8f461715137f15","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1322299456},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"LUKBXSAWLPMMSZ-OWOJBTEDSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"LUKBXSAWLPMMSZ-OWOJBTEDSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP002","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-8.43453,"median_top_score_kcal_mol":-8.43453,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-8.43453,-8.35154,-8.32142,-8.08106,-8.00897,-7.87433,-7.66756,-7.65588,-7.59278],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":17019,"role":"pose-ensemble-sdf","sha256":"6738ef52d248ff2b134526de843bf92e2d3788edb70e29de1c0bb5a3259e2f4b","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-8.43453}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"44ad32bc6550d095b2f748b0940e41f3b7b252e69c7694d57e9e316c8a3b20b5","storage":"external-artifact-root"},{"bytes":3212,"role":"prepared-ligand-input","sha256":"4a74fd70f87e56e8c1f6a39cb6b8fa7facdf1727aab699606e684698ddd08a54","storage":"external-artifact-root"},{"bytes":14059,"role":"execution-receipt","sha256":"cb47ba5fa724dadc12dacba23e1cc002aed67a2cc6683090e10e98a38d42c430","storage":"external-artifact-root"},{"bytes":17019,"role":"pose-ensemble-sdf","sha256":"f7278dffe4829efd573084627b4ee06e3c8aef5a0878ae736a69b004fb868b4c","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"ac12af6be5321f9ab17aef376dd592b2fc10ad6e2c1bf957dd2f5c4fae9b5367","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-8.4811,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"stilbenoid","molecule_id":"NP003","molecule_input_sha256":"4a74fd70f87e56e8c1f6a39cb6b8fa7facdf1727aab699606e684698ddd08a54","molecule_name":"Pterostilbene","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-01/NP003_seed41/NP003_seed41.sdf","pose_id":"NP003-seed41-mode1","pose_score":-8.4811,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3212,"role":"prepared-ligand-input","sha256":"4a74fd70f87e56e8c1f6a39cb6b8fa7facdf1727aab699606e684698ddd08a54","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":987853854},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"VLEUZFDZJKSGMX-ONEGZZNKSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"VLEUZFDZJKSGMX-ONEGZZNKSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP003","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-8.4811,"median_top_score_kcal_mol":-8.4811,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-8.4811,-8.47315,-8.12434,-8.01645,-7.96721,-7.9013,-7.69875,-7.41555,-7.35358],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":17019,"role":"pose-ensemble-sdf","sha256":"f7278dffe4829efd573084627b4ee06e3c8aef5a0878ae736a69b004fb868b4c","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-8.4811}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"44ad32bc6550d095b2f748b0940e41f3b7b252e69c7694d57e9e316c8a3b20b5","storage":"external-artifact-root"},{"bytes":2986,"role":"prepared-ligand-input","sha256":"43a51333f5244200b9c69ecf4989fe8539f7cf34e99e4d928f21ea2ce1dc3626","storage":"external-artifact-root"},{"bytes":14059,"role":"execution-receipt","sha256":"cb47ba5fa724dadc12dacba23e1cc002aed67a2cc6683090e10e98a38d42c430","storage":"external-artifact-root"},{"bytes":22798,"role":"pose-ensemble-sdf","sha256":"e0016d534e96cb8c9082788917b0925dff001f45893c11cab7af452dce59c652","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"119a0f06ce7612fee13b18b7c5d790b2fa5db116231885d070d76c7a4ca6237d","storage":"external-artifact-root"},{"bytes":2353,"role":"request-spec","sha256":"a9d87f2d53c28b8c5612358ce23094347c3abb0ab04e3d7839ac3bc190169112","storage":"external-artifact-root"},{"bytes":12165,"role":"execution-receipt","sha256":"f9738f903a15fb2dd75809d16526a28a8be0cbf036e189c38ebae7c0c0775778","storage":"external-artifact-root"},{"bytes":22798,"role":"pose-ensemble-sdf","sha256":"a98bd2cb43a765cf187abb416d19e82d220d3d136c795aba182aba90c9f969ab","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"30c2f56ce0abddc22cdfec8286c4a874dd02f277a526731d6e107abe33cc7133","storage":"external-artifact-root"},{"bytes":22798,"role":"pose-ensemble-sdf","sha256":"6bedf1751fe584cb1753f8a09add526f22ef6f5e5ebf8a1cd14df3ff226b1447","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"4132bcc4483b64f82e0ac6df3459eb190348935bf9cedb063f9bdf5080036e17","storage":"external-artifact-root"},{"bytes":22798,"role":"pose-ensemble-sdf","sha256":"ef1f3bf0a4efa86ae7afcb68af20697764e29ce1000b289f38aaa588353142c2","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"01c415d06821106ff50a9cfbbc60541faf6a598e85098c6dc437fe49d81bf4f8","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.03463,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":{"evidence_class":"computational-screening-hypothesis","interpretation":"Passing supports repeatable pose scoring and site occupancy under this one Smina/Vinardo protocol. It does not establish binding, affinity, selectivity, target inhibition, exposure, or therapeutic effect.","overall_gate_pass":true,"pose_geometry":{"all_top_poses_contact_declared_site":true,"all_top_poses_inside_declared_box":true,"all_top_poses_no_severe_clashes":true,"contact_persistence_gate_pass":true,"contacted_site_residue_union":["A:ASN704","A:GLU203","A:GLU204","A:HIS734","A:MET205","A:PHE350","A:PHE351","A:SER624","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL650","A:VAL705"],"contacted_site_residues_in_every_seed":["A:ASN704","A:GLU203","A:GLU204","A:HIS734","A:MET205","A:PHE350","A:PHE351","A:SER624","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL650","A:VAL705"],"geometry_gate_pass":true,"mean_pairwise_contact_jaccard":1.0,"minimum_pairwise_contact_jaccard":1.0,"per_seed":[{"contacted_site_residue_count":14,"contacted_site_residues":["A:ASN704","A:GLU203","A:GLU204","A:HIS734","A:MET205","A:PHE350","A:PHE351","A:SER624","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL650","A:VAL705"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":22798,"role":"pose-ensemble-sdf","sha256":"a98bd2cb43a765cf187abb416d19e82d220d3d136c795aba182aba90c9f969ab","storage":"external-artifact-root"},"seed":11,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.03463},{"contacted_site_residue_count":14,"contacted_site_residues":["A:ASN704","A:GLU203","A:GLU204","A:HIS734","A:MET205","A:PHE350","A:PHE351","A:SER624","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL650","A:VAL705"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":22798,"role":"pose-ensemble-sdf","sha256":"6bedf1751fe584cb1753f8a09add526f22ef6f5e5ebf8a1cd14df3ff226b1447","storage":"external-artifact-root"},"seed":29,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.02968},{"contacted_site_residue_count":14,"contacted_site_residues":["A:ASN704","A:GLU203","A:GLU204","A:HIS734","A:MET205","A:PHE350","A:PHE351","A:SER624","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL650","A:VAL705"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":22798,"role":"pose-ensemble-sdf","sha256":"ef1f3bf0a4efa86ae7afcb68af20697764e29ce1000b289f38aaa588353142c2","storage":"external-artifact-root"},"seed":47,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.03005}],"persistent_site_residue_count":14},"requested_seed_count":3,"score_repeatability":{"maximum_span_kcal_mol":1.0,"pass":true,"top_score_span_kcal_mol":0.00495},"state":"same-protocol-confirmation-passed","successful_seed_count":3},"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"flavonol","molecule_id":"NP004","molecule_input_sha256":"43a51333f5244200b9c69ecf4989fe8539f7cf34e99e4d928f21ea2ce1dc3626","molecule_name":"Quercetin","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/promoted-set-replicate-docking/np004/NP004_seed11/NP004_seed11.sdf","pose_id":"NP004-seed11-mode1","pose_score":-10.03463,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2986,"role":"prepared-ligand-input","sha256":"43a51333f5244200b9c69ecf4989fe8539f7cf34e99e4d928f21ea2ce1dc3626","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":587695227},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"REFJWTPEDVJJIY-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"REFJWTPEDVJJIY-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP004","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.031453333333333,"median_top_score_kcal_mol":-10.03005,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.0027572873142515907,"top_score_span_kcal_mol":0.004949999999999122},"seed_observations":[{"affinities_kcal_mol":[-10.02867,-9.89647,-8.94779,-8.85007,-8.79585,-8.67024,-8.58144,-8.55926,-8.54701],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":22798,"role":"pose-ensemble-sdf","sha256":"e0016d534e96cb8c9082788917b0925dff001f45893c11cab7af452dce59c652","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-10.02867},{"affinities_kcal_mol":[-10.03463,-9.90184,-9.5328,-9.52572,-9.34792,-8.94706,-8.86038,-8.79627,-8.60699],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":22798,"role":"pose-ensemble-sdf","sha256":"a98bd2cb43a765cf187abb416d19e82d220d3d136c795aba182aba90c9f969ab","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":11,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.03463},{"affinities_kcal_mol":[-10.02968,-9.89123,-9.34843,-9.11341,-8.94116,-8.92383,-8.86537,-8.79496,-8.67404],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":22798,"role":"pose-ensemble-sdf","sha256":"6bedf1751fe584cb1753f8a09add526f22ef6f5e5ebf8a1cd14df3ff226b1447","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":29,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.02968},{"affinities_kcal_mol":[-10.03005,-9.89497,-9.34848,-8.94887,-8.92932,-8.85943,-8.78614,-8.67063,-8.60669],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":22798,"role":"pose-ensemble-sdf","sha256":"ef1f3bf0a4efa86ae7afcb68af20697764e29ce1000b289f38aaa588353142c2","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":47,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.03005}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"c9697646af73b38e87ccdc78e2000e2e266aed90533db7671003f5187a5e63d7","storage":"external-artifact-root"},{"bytes":2900,"role":"prepared-ligand-input","sha256":"0db0e1fb6b5807f80c89039a0e26555415cee8d256c47b2742b5f390f30deb1a","storage":"external-artifact-root"},{"bytes":14050,"role":"execution-receipt","sha256":"85c2d014aef1f8b1a236d4b98a33851407df86f79be667bd6041409f51c670eb","storage":"external-artifact-root"},{"bytes":21195,"role":"pose-ensemble-sdf","sha256":"2d7c10d30a199dacd32c3e1453ab71ad4f49e1bd49a8a015e3b4dfbcb494b7f8","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"cac24cacc5203b22d49691469fd2588e92ac58282590c271208be1b548a27cce","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.70104,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"flavone","molecule_id":"NP005","molecule_input_sha256":"0db0e1fb6b5807f80c89039a0e26555415cee8d256c47b2742b5f390f30deb1a","molecule_name":"Luteolin","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-02/NP005_seed41/NP005_seed41.sdf","pose_id":"NP005-seed41-mode1","pose_score":-9.70104,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2900,"role":"prepared-ligand-input","sha256":"0db0e1fb6b5807f80c89039a0e26555415cee8d256c47b2742b5f390f30deb1a","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":2084258712},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"IQPNAANSBPBGFQ-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"IQPNAANSBPBGFQ-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP005","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.70104,"median_top_score_kcal_mol":-9.70104,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-9.70104,-9.47036,-8.91011,-8.76386,-8.63451,-8.57207,-8.4716,-8.4306,-8.41233],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":21195,"role":"pose-ensemble-sdf","sha256":"2d7c10d30a199dacd32c3e1453ab71ad4f49e1bd49a8a015e3b4dfbcb494b7f8","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-9.70104}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"c9697646af73b38e87ccdc78e2000e2e266aed90533db7671003f5187a5e63d7","storage":"external-artifact-root"},{"bytes":2814,"role":"prepared-ligand-input","sha256":"3a456c6dcee1d7552d2030a9c5548a6d546d17b1c0d725b51110358a1d994ced","storage":"external-artifact-root"},{"bytes":14050,"role":"execution-receipt","sha256":"85c2d014aef1f8b1a236d4b98a33851407df86f79be667bd6041409f51c670eb","storage":"external-artifact-root"},{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"3939d918b88a37d83320c0ef639c5ba346b84dd4622b4b38a933a05f3ba5b544","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"3bd68590c495e07862cc32070929d505cda0f5e71b5b4711a919a8acace2fa8b","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.35065,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"flavone","molecule_id":"NP006","molecule_input_sha256":"3a456c6dcee1d7552d2030a9c5548a6d546d17b1c0d725b51110358a1d994ced","molecule_name":"Apigenin","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-02/NP006_seed41/NP006_seed41.sdf","pose_id":"NP006-seed41-mode1","pose_score":-9.35065,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2814,"role":"prepared-ligand-input","sha256":"3a456c6dcee1d7552d2030a9c5548a6d546d17b1c0d725b51110358a1d994ced","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":367188032},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"KZNIFHPLKGYRTM-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"KZNIFHPLKGYRTM-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP006","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.35065,"median_top_score_kcal_mol":-9.35065,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-9.35065,-8.90334,-8.26752,-8.22053,-8.1658,-8.10335,-8.10279,-8.0831,-8.00624],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"3939d918b88a37d83320c0ef639c5ba346b84dd4622b4b38a933a05f3ba5b544","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-9.35065}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"c9697646af73b38e87ccdc78e2000e2e266aed90533db7671003f5187a5e63d7","storage":"external-artifact-root"},{"bytes":2900,"role":"prepared-ligand-input","sha256":"70addd7430d6f3f7e80284690744f2b562ea7903f98d7b413c4e3b639d8a9f15","storage":"external-artifact-root"},{"bytes":14050,"role":"execution-receipt","sha256":"85c2d014aef1f8b1a236d4b98a33851407df86f79be667bd6041409f51c670eb","storage":"external-artifact-root"},{"bytes":21195,"role":"pose-ensemble-sdf","sha256":"f53b09ef1b4c871e2917fe454e953d9c1a476565d402265c7ce377ef3ebaf1ea","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"d7f24d157be12629d08e47a35f7313f57d3d6a9518582034ddf13cd97761658a","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.61398,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"flavonol","molecule_id":"NP007","molecule_input_sha256":"70addd7430d6f3f7e80284690744f2b562ea7903f98d7b413c4e3b639d8a9f15","molecule_name":"Kaempferol","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-02/NP007_seed41/NP007_seed41.sdf","pose_id":"NP007-seed41-mode1","pose_score":-9.61398,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2900,"role":"prepared-ligand-input","sha256":"70addd7430d6f3f7e80284690744f2b562ea7903f98d7b413c4e3b639d8a9f15","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1750597481},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"IYRMWMYZSQPJKC-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"IYRMWMYZSQPJKC-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP007","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.61398,"median_top_score_kcal_mol":-9.61398,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-9.61398,-9.393,-9.07479,-8.87838,-8.68443,-8.56661,-8.2061,-8.20408,-8.02128],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":21195,"role":"pose-ensemble-sdf","sha256":"f53b09ef1b4c871e2917fe454e953d9c1a476565d402265c7ce377ef3ebaf1ea","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-9.61398}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"c9697646af73b38e87ccdc78e2000e2e266aed90533db7671003f5187a5e63d7","storage":"external-artifact-root"},{"bytes":2902,"role":"prepared-ligand-input","sha256":"f4a4b6706c0de4cf4363e778c7e5eaf4d4d21f63663797e4041bb813db4a0b14","storage":"external-artifact-root"},{"bytes":14050,"role":"execution-receipt","sha256":"85c2d014aef1f8b1a236d4b98a33851407df86f79be667bd6041409f51c670eb","storage":"external-artifact-root"},{"bytes":21195,"role":"pose-ensemble-sdf","sha256":"4384f4fbb6380a57e1ce13a119500f646cb2b8f999ca2faf4c7f69fe1a331c25","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"b2b2052d599ba3034cb5cd838a0f63903d4f4927c76ee15b50c4f42ab74be41a","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.82875,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"flavonol","molecule_id":"NP008","molecule_input_sha256":"f4a4b6706c0de4cf4363e778c7e5eaf4d4d21f63663797e4041bb813db4a0b14","molecule_name":"Fisetin","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-02/NP008_seed41/NP008_seed41.sdf","pose_id":"NP008-seed41-mode1","pose_score":-9.82875,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2902,"role":"prepared-ligand-input","sha256":"f4a4b6706c0de4cf4363e778c7e5eaf4d4d21f63663797e4041bb813db4a0b14","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":173766546},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"XHEFDIBZLJXQHF-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"XHEFDIBZLJXQHF-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP008","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.82875,"median_top_score_kcal_mol":-9.82875,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-9.82875,-9.00465,-8.95967,-8.78384,-8.69163,-8.4184,-8.34174,-8.15172,-8.12468],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":21195,"role":"pose-ensemble-sdf","sha256":"4384f4fbb6380a57e1ce13a119500f646cb2b8f999ca2faf4c7f69fe1a331c25","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-9.82875}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"e92ad0a868f8797fce03ef4ede328dabc06cc723f963aa206741354d2602e311","storage":"external-artifact-root"},{"bytes":2812,"role":"prepared-ligand-input","sha256":"ba7c6d1657d80b71463975fe6fd489250f6d3974337c7357284c57482dd06a1a","storage":"external-artifact-root"},{"bytes":14064,"role":"execution-receipt","sha256":"c115eab8a9fec2377c82ba22eb6215c631716a4024f25283b54d01b6e2a28cc8","storage":"external-artifact-root"},{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"5c109fed039ca043110df53d2a1aaa2d85b6ae1f1c3ee7fe48cb1fc3a3b10416","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"1a7756c3670340c3e60f18b4367adbd95df9d024089ec4d5a434d7f3c5f63e37","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-8.6409,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"isoflavone","molecule_id":"NP009","molecule_input_sha256":"ba7c6d1657d80b71463975fe6fd489250f6d3974337c7357284c57482dd06a1a","molecule_name":"Genistein","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-03/NP009_seed41/NP009_seed41.sdf","pose_id":"NP009-seed41-mode1","pose_score":-8.6409,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2812,"role":"prepared-ligand-input","sha256":"ba7c6d1657d80b71463975fe6fd489250f6d3974337c7357284c57482dd06a1a","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":358774789},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"TZBJGXHYKVUXJN-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"TZBJGXHYKVUXJN-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP009","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-8.6409,"median_top_score_kcal_mol":-8.6409,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-8.6409,-8.49271,-8.41377,-8.30441,-8.25181,-8.20192,-8.05124,-7.92032,-7.90757],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"5c109fed039ca043110df53d2a1aaa2d85b6ae1f1c3ee7fe48cb1fc3a3b10416","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-8.6409}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"e92ad0a868f8797fce03ef4ede328dabc06cc723f963aa206741354d2602e311","storage":"external-artifact-root"},{"bytes":2983,"role":"prepared-ligand-input","sha256":"e2025f8b7facddd609fbee7af4543a3561b8225b45477cce2fbb2c7ec2b60f49","storage":"external-artifact-root"},{"bytes":14064,"role":"execution-receipt","sha256":"c115eab8a9fec2377c82ba22eb6215c631716a4024f25283b54d01b6e2a28cc8","storage":"external-artifact-root"},{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"ed885d775392d7ab76f533fe93a160e9fe787937d94ce62884f69d025bc819d0","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"743db25622f11edf7cdf66bae4db1d0470fcbfa9a6de81d4b92c9050a480e6c5","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-8.73491,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"flavanone","molecule_id":"NP010","molecule_input_sha256":"e2025f8b7facddd609fbee7af4543a3561b8225b45477cce2fbb2c7ec2b60f49","molecule_name":"(2S)-Naringenin","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-03/NP010_seed41/NP010_seed41.sdf","pose_id":"NP010-seed41-mode1","pose_score":-8.73491,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2983,"role":"prepared-ligand-input","sha256":"e2025f8b7facddd609fbee7af4543a3561b8225b45477cce2fbb2c7ec2b60f49","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1413268010},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"FTVWIRXFELQLPI-ZDUSSCGKSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"FTVWIRXFELQLPI-ZDUSSCGKSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP010","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-8.73491,"median_top_score_kcal_mol":-8.73491,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-8.73491,-8.398,-8.2616,-7.95948,-7.79792,-7.78882,-7.67343,-7.52205,-7.51763],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"ed885d775392d7ab76f533fe93a160e9fe787937d94ce62884f69d025bc819d0","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-8.73491}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"e92ad0a868f8797fce03ef4ede328dabc06cc723f963aa206741354d2602e311","storage":"external-artifact-root"},{"bytes":4609,"role":"prepared-ligand-input","sha256":"6ea07cca7a903999ef7ecb4fd063f462e76864b1a521e8264b473d976de2324e","storage":"external-artifact-root"},{"bytes":14064,"role":"execution-receipt","sha256":"c115eab8a9fec2377c82ba22eb6215c631716a4024f25283b54d01b6e2a28cc8","storage":"external-artifact-root"},{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"83751bd5ae41c5a1d9d2c2a0b19f5a328cc704a11d83a9c9ddab6fd5448e7be0","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"e383610399ca894d492ccce4b0a16857145e21313e50209ba35687ba55412690","storage":"external-artifact-root"},{"bytes":2353,"role":"request-spec","sha256":"17088ff7f005d10acacf778e8fc81f1afdc22c5611a0d5225803e0f4fbf48900","storage":"external-artifact-root"},{"bytes":12188,"role":"execution-receipt","sha256":"fd6bfa40f407019b6daf0d5d7edede4e51e2dd0df5cdd4c54f2c91723491fbf9","storage":"external-artifact-root"},{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"c58d346db2451d78a23ba1f614bb8f1abd1db8376b8c36aa83a7521b99ca914c","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"419343e5ec9fd9aaca605f0b964966a41bf4c19c54787cea4fe8ee5c31fb6f4b","storage":"external-artifact-root"},{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"60c93b5188d185f2832a1da69e567f547e89df7a1e21d049c747932520ddb3ef","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"0cea4022b87cfff0f93b0221ffb9fc7f01abb07f0e8cb7fa8dc52993a579c6b5","storage":"external-artifact-root"},{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"6ff37f291732c690a900e63875bc8383fbc4dff7c5511923dca5164d2d9ef208","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"4dfd8eecc026a75d0e2848c76297919a922fe7e2d000a810b9b82c526c898b59","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-11.79107,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":{"evidence_class":"computational-screening-hypothesis","interpretation":"Passing supports repeatable pose scoring and site occupancy under this one Smina/Vinardo protocol. It does not establish binding, affinity, selectivity, target inhibition, exposure, or therapeutic effect.","overall_gate_pass":true,"pose_geometry":{"all_top_poses_contact_declared_site":true,"all_top_poses_inside_declared_box":true,"all_top_poses_no_severe_clashes":true,"contact_persistence_gate_pass":true,"contacted_site_residue_union":["A:ARG123","A:ASN704","A:GLU203","A:GLU204","A:GLY626","A:HIS734","A:PHE350","A:SER624","A:TRP623","A:TRP653","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL540","A:VAL650","A:VAL705"],"contacted_site_residues_in_every_seed":["A:ARG123","A:ASN704","A:GLU203","A:GLU204","A:GLY626","A:HIS734","A:PHE350","A:SER624","A:TRP623","A:TRP653","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL540","A:VAL650","A:VAL705"],"geometry_gate_pass":true,"mean_pairwise_contact_jaccard":1.0,"minimum_pairwise_contact_jaccard":1.0,"per_seed":[{"contacted_site_residue_count":17,"contacted_site_residues":["A:ARG123","A:ASN704","A:GLU203","A:GLU204","A:GLY626","A:HIS734","A:PHE350","A:SER624","A:TRP623","A:TRP653","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL540","A:VAL650","A:VAL705"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"c58d346db2451d78a23ba1f614bb8f1abd1db8376b8c36aa83a7521b99ca914c","storage":"external-artifact-root"},"seed":11,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-11.74094},{"contacted_site_residue_count":17,"contacted_site_residues":["A:ARG123","A:ASN704","A:GLU203","A:GLU204","A:GLY626","A:HIS734","A:PHE350","A:SER624","A:TRP623","A:TRP653","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL540","A:VAL650","A:VAL705"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"60c93b5188d185f2832a1da69e567f547e89df7a1e21d049c747932520ddb3ef","storage":"external-artifact-root"},"seed":29,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-11.74725},{"contacted_site_residue_count":17,"contacted_site_residues":["A:ARG123","A:ASN704","A:GLU203","A:GLU204","A:GLY626","A:HIS734","A:PHE350","A:SER624","A:TRP623","A:TRP653","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL540","A:VAL650","A:VAL705"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"6ff37f291732c690a900e63875bc8383fbc4dff7c5511923dca5164d2d9ef208","storage":"external-artifact-root"},"seed":47,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-11.79042}],"persistent_site_residue_count":17},"requested_seed_count":3,"score_repeatability":{"maximum_span_kcal_mol":1.0,"pass":true,"top_score_span_kcal_mol":0.04948},"state":"same-protocol-confirmation-passed","successful_seed_count":3},"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"catechin","molecule_id":"NP011","molecule_input_sha256":"6ea07cca7a903999ef7ecb4fd063f462e76864b1a521e8264b473d976de2324e","molecule_name":"(−)-Epigallocatechin-3-gallate","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-03/NP011_seed41/NP011_seed41.sdf","pose_id":"NP011-seed41-mode1","pose_score":-11.79107,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":4609,"role":"prepared-ligand-input","sha256":"6ea07cca7a903999ef7ecb4fd063f462e76864b1a521e8264b473d976de2324e","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1069245383},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"WMBWREPUVVBILR-WIYYLYMNSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"WMBWREPUVVBILR-WIYYLYMNSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP011","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-11.759536666666667,"median_top_score_kcal_mol":-11.74725,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.026931194428270636,"top_score_span_kcal_mol":0.04947999999999908},"seed_observations":[{"affinities_kcal_mol":[-11.79107,-11.71121,-10.89361,-10.88197,-10.61286,-10.58922,-10.51367,-10.50844,-10.27508],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"83751bd5ae41c5a1d9d2c2a0b19f5a328cc704a11d83a9c9ddab6fd5448e7be0","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-11.79107},{"affinities_kcal_mol":[-11.74094,-11.66617,-10.85916,-10.84843,-10.68145,-10.63231,-10.52379,-10.47567,-10.2434],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"c58d346db2451d78a23ba1f614bb8f1abd1db8376b8c36aa83a7521b99ca914c","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":11,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-11.74094},{"affinities_kcal_mol":[-11.74725,-11.70177,-11.67433,-10.86433,-10.84789,-10.76764,-10.6793,-10.52113,-10.46391],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"60c93b5188d185f2832a1da69e567f547e89df7a1e21d049c747932520ddb3ef","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":29,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-11.74725},{"affinities_kcal_mol":[-11.79042,-11.77722,-10.89923,-10.88522,-10.82038,-10.80107,-10.7042,-10.63439,-10.55515],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"6ff37f291732c690a900e63875bc8383fbc4dff7c5511923dca5164d2d9ef208","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":47,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-11.79042}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"e92ad0a868f8797fce03ef4ede328dabc06cc723f963aa206741354d2602e311","storage":"external-artifact-root"},{"bytes":2669,"role":"prepared-ligand-input","sha256":"7cd81e858e53d83a50316cc2ed8ad5a30243531b50b18c6219bf03ac64806bea","storage":"external-artifact-root"},{"bytes":14064,"role":"execution-receipt","sha256":"c115eab8a9fec2377c82ba22eb6215c631716a4024f25283b54d01b6e2a28cc8","storage":"external-artifact-root"},{"bytes":22167,"role":"pose-ensemble-sdf","sha256":"2ef029b763105de3372f3922b316f11512bdd102550dfd6d68144cb2bc21f1a2","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"8004716efd9dcd6ab2c1022e7914c25ed48ac7d2c09d1db6075adfb4a9f2103b","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-8.65718,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"polyphenol","molecule_id":"NP012","molecule_input_sha256":"7cd81e858e53d83a50316cc2ed8ad5a30243531b50b18c6219bf03ac64806bea","molecule_name":"Ellagic acid","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-03/NP012_seed41/NP012_seed41.sdf","pose_id":"NP012-seed41-mode1","pose_score":-8.65718,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2669,"role":"prepared-ligand-input","sha256":"7cd81e858e53d83a50316cc2ed8ad5a30243531b50b18c6219bf03ac64806bea","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":430940940},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"AFSDNFLWKVMVRB-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"AFSDNFLWKVMVRB-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP012","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-8.65718,"median_top_score_kcal_mol":-8.65718,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-8.65718,-8.65664,-8.50669,-8.36314,-8.33771,-8.29288,-8.29283,-8.2871,-8.28122],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":22167,"role":"pose-ensemble-sdf","sha256":"2ef029b763105de3372f3922b316f11512bdd102550dfd6d68144cb2bc21f1a2","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-8.65718}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"4f4e8896abf5ac60d87f4765283b15cf6eff7b39c41961aaa5da7f043fcd6dd2","storage":"external-artifact-root"},{"bytes":3947,"role":"prepared-ligand-input","sha256":"a325bfd6a1bfc822c8613bbcad7a94425f45be16b17a324ca171d76147b2fd06","storage":"external-artifact-root"},{"bytes":14057,"role":"execution-receipt","sha256":"92ac7f366d7d83a85e291e8e2568f03b6e41032269ef39552411665f242f4390","storage":"external-artifact-root"},{"bytes":21690,"role":"pose-ensemble-sdf","sha256":"722c12a39d3bb0bff003e9ca156e5183fc31bfbd632e04575de6cf3110579545","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"e40229dda75d3ba84f2e647c3a2b22bb9afa7eb6ae9d08512713626c3dfd68d5","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-8.49344,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"isoquinoline-alkaloid","molecule_id":"NP013","molecule_input_sha256":"a325bfd6a1bfc822c8613bbcad7a94425f45be16b17a324ca171d76147b2fd06","molecule_name":"Berberine cation","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-04/NP013_seed41/NP013_seed41.sdf","pose_id":"NP013-seed41-mode1","pose_score":-8.49344,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3947,"role":"prepared-ligand-input","sha256":"a325bfd6a1bfc822c8613bbcad7a94425f45be16b17a324ca171d76147b2fd06","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1679074209},"formal_charge":1,"identity_relation":"prepared form matches parent InChIKey","inchikey":"YBHILYKTIRIUTE-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"YBHILYKTIRIUTE-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP013","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-8.49344,"median_top_score_kcal_mol":-8.49344,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-8.49344,-8.36559,-7.85463,-7.84881,-7.34675,-7.33623,-7.32776,-7.21073,-7.19286],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":21690,"role":"pose-ensemble-sdf","sha256":"722c12a39d3bb0bff003e9ca156e5183fc31bfbd632e04575de6cf3110579545","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-8.49344}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"4f4e8896abf5ac60d87f4765283b15cf6eff7b39c41961aaa5da7f043fcd6dd2","storage":"external-artifact-root"},{"bytes":2816,"role":"prepared-ligand-input","sha256":"3b3a64f7e72ea3e0aecdd4443ea0d378d09645bcdb1682d3f42e45e9c9756d60","storage":"external-artifact-root"},{"bytes":14057,"role":"execution-receipt","sha256":"92ac7f366d7d83a85e291e8e2568f03b6e41032269ef39552411665f242f4390","storage":"external-artifact-root"},{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"637ed2859719a06433626ae9e1f8d9772696ac73d3e269137e30935f6435940c","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"46f4be72e6f0ac80829eb39c3b44f7d50cbbef0adf49321b43ceb2a869b80957","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-8.91781,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"flavone","molecule_id":"NP014","molecule_input_sha256":"3b3a64f7e72ea3e0aecdd4443ea0d378d09645bcdb1682d3f42e45e9c9756d60","molecule_name":"Baicalein","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-04/NP014_seed41/NP014_seed41.sdf","pose_id":"NP014-seed41-mode1","pose_score":-8.91781,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2816,"role":"prepared-ligand-input","sha256":"3b3a64f7e72ea3e0aecdd4443ea0d378d09645bcdb1682d3f42e45e9c9756d60","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1022975310},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"FXNFHKRTJBSTCS-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"FXNFHKRTJBSTCS-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP014","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-8.91781,"median_top_score_kcal_mol":-8.91781,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-8.91781,-8.79658,-8.60112,-8.48543,-8.22068,-8.12466,-8.03326,-8.00487,-7.91927],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"637ed2859719a06433626ae9e1f8d9772696ac73d3e269137e30935f6435940c","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-8.91781}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"4f4e8896abf5ac60d87f4765283b15cf6eff7b39c41961aaa5da7f043fcd6dd2","storage":"external-artifact-root"},{"bytes":3463,"role":"prepared-ligand-input","sha256":"57fd5758d716504b213c8395fe78cc39b9eddf9187b41fcd4a1fa9a5a7cc8677","storage":"external-artifact-root"},{"bytes":14057,"role":"execution-receipt","sha256":"92ac7f366d7d83a85e291e8e2568f03b6e41032269ef39552411665f242f4390","storage":"external-artifact-root"},{"bytes":18621,"role":"pose-ensemble-sdf","sha256":"b5f99b2b6ff58c70f26218ce404706ffa17297b0b959ca590672375b57521e03","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"25cab495bb5fd87c46b316acb873097d945e563b09f242274659e2bf5f5cba07","storage":"external-artifact-root"},{"bytes":2353,"role":"request-spec","sha256":"b8fa54694d18f311c585340dcb50700cee1338e16ff812881b9a8f24bfab7220","storage":"external-artifact-root"},{"bytes":12161,"role":"execution-receipt","sha256":"53ede300aaf031253c5ba9bef829dae2250e24030b7def488e3db9054d1333c5","storage":"external-artifact-root"},{"bytes":18621,"role":"pose-ensemble-sdf","sha256":"34cb2d60de6c2e17066eb9e249f41b0db943fcb9eda196a7e30dee2542ac92b3","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"322a71af9bafd1c641d6ea4ce6e70b6916ec84351544f4268cb11750e6435e6e","storage":"external-artifact-root"},{"bytes":18621,"role":"pose-ensemble-sdf","sha256":"d89c4d8368fec2cc27f21ae8b0b3f7916d559dfbce00c65d5d8d53b26c3827d6","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"359d900fcd178021ae3d4ad98794297db1e15dd930419f1b6af4b2f1101da5ed","storage":"external-artifact-root"},{"bytes":18621,"role":"pose-ensemble-sdf","sha256":"a07bd90ad20d742f5022959f909a692cd81764c1a9e8af2b22abcd4a7de67486","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"c9d651256aa3a23be0df8b19258faec2b7d8b39e138ebca2ff29ea3c893f7489","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.67292,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":{"evidence_class":"computational-screening-hypothesis","interpretation":"Passing supports repeatable pose scoring and site occupancy under this one Smina/Vinardo protocol. It does not establish binding, affinity, selectivity, target inhibition, exposure, or therapeutic effect.","overall_gate_pass":true,"pose_geometry":{"all_top_poses_contact_declared_site":true,"all_top_poses_inside_declared_box":true,"all_top_poses_no_severe_clashes":true,"contact_persistence_gate_pass":true,"contacted_site_residue_union":["A:ARG123","A:ASN704","A:GLU203","A:GLU204","A:PHE350","A:PHE351","A:PHE664","A:SER624","A:TRP653","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL650"],"contacted_site_residues_in_every_seed":["A:ARG123","A:ASN704","A:GLU203","A:GLU204","A:PHE350","A:PHE351","A:PHE664","A:SER624","A:TRP653","A:TYR625","A:TYR656","A:TYR660","A:VAL650"],"geometry_gate_pass":true,"mean_pairwise_contact_jaccard":0.952381,"minimum_pairwise_contact_jaccard":0.928571,"per_seed":[{"contacted_site_residue_count":14,"contacted_site_residues":["A:ARG123","A:ASN704","A:GLU203","A:GLU204","A:PHE350","A:PHE351","A:PHE664","A:SER624","A:TRP653","A:TYR541","A:TYR625","A:TYR656","A:TYR660","A:VAL650"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":18621,"role":"pose-ensemble-sdf","sha256":"34cb2d60de6c2e17066eb9e249f41b0db943fcb9eda196a7e30dee2542ac92b3","storage":"external-artifact-root"},"seed":11,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-9.66996},{"contacted_site_residue_count":13,"contacted_site_residues":["A:ARG123","A:ASN704","A:GLU203","A:GLU204","A:PHE350","A:PHE351","A:PHE664","A:SER624","A:TRP653","A:TYR625","A:TYR656","A:TYR660","A:VAL650"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":18621,"role":"pose-ensemble-sdf","sha256":"d89c4d8368fec2cc27f21ae8b0b3f7916d559dfbce00c65d5d8d53b26c3827d6","storage":"external-artifact-root"},"seed":29,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-9.67292},{"contacted_site_residue_count":13,"contacted_site_residues":["A:ARG123","A:ASN704","A:GLU203","A:GLU204","A:PHE350","A:PHE351","A:PHE664","A:SER624","A:TRP653","A:TYR625","A:TYR656","A:TYR660","A:VAL650"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":18621,"role":"pose-ensemble-sdf","sha256":"a07bd90ad20d742f5022959f909a692cd81764c1a9e8af2b22abcd4a7de67486","storage":"external-artifact-root"},"seed":47,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-9.65158}],"persistent_site_residue_count":13},"requested_seed_count":3,"score_repeatability":{"maximum_span_kcal_mol":1.0,"pass":true,"top_score_span_kcal_mol":0.02134},"state":"same-protocol-confirmation-passed","successful_seed_count":3},"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"neolignan","molecule_id":"NP015","molecule_input_sha256":"57fd5758d716504b213c8395fe78cc39b9eddf9187b41fcd4a1fa9a5a7cc8677","molecule_name":"Honokiol","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/promoted-set-replicate-docking/np015/NP015_seed29/NP015_seed29.sdf","pose_id":"NP015-seed29-mode1","pose_score":-9.67292,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3463,"role":"prepared-ligand-input","sha256":"57fd5758d716504b213c8395fe78cc39b9eddf9187b41fcd4a1fa9a5a7cc8677","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":288226735},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"FVYXIJYOAGAUQK-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"FVYXIJYOAGAUQK-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP015","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.664819999999999,"median_top_score_kcal_mol":-9.66996,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.01156129750503833,"top_score_span_kcal_mol":0.02134000000000036},"seed_observations":[{"affinities_kcal_mol":[-9.66914,-9.58369,-9.50439,-9.05144,-8.98688,-8.97091,-8.85214,-8.80884,-8.73792],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":18621,"role":"pose-ensemble-sdf","sha256":"b5f99b2b6ff58c70f26218ce404706ffa17297b0b959ca590672375b57521e03","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-9.66914},{"affinities_kcal_mol":[-9.66996,-9.5951,-9.55469,-9.49039,-9.29014,-9.17207,-9.13138,-8.96022,-8.78964],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":18621,"role":"pose-ensemble-sdf","sha256":"34cb2d60de6c2e17066eb9e249f41b0db943fcb9eda196a7e30dee2542ac92b3","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":11,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-9.66996},{"affinities_kcal_mol":[-9.67292,-9.53904,-9.49053,-9.27366,-9.27362,-9.1784,-9.12742,-8.95537,-8.82092],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":18621,"role":"pose-ensemble-sdf","sha256":"d89c4d8368fec2cc27f21ae8b0b3f7916d559dfbce00c65d5d8d53b26c3827d6","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":29,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-9.67292},{"affinities_kcal_mol":[-9.65158,-9.53671,-9.51078,-9.2776,-9.19582,-9.14611,-8.95599,-8.79199,-8.77823],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":18621,"role":"pose-ensemble-sdf","sha256":"a07bd90ad20d742f5022959f909a692cd81764c1a9e8af2b22abcd4a7de67486","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":47,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-9.65158}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"4f4e8896abf5ac60d87f4765283b15cf6eff7b39c41961aaa5da7f043fcd6dd2","storage":"external-artifact-root"},{"bytes":2816,"role":"prepared-ligand-input","sha256":"d6d1d370cdd84a60a250be917c8d1f1dc56cd08aab235dd886b63d02ef78fc09","storage":"external-artifact-root"},{"bytes":14057,"role":"execution-receipt","sha256":"92ac7f366d7d83a85e291e8e2568f03b6e41032269ef39552411665f242f4390","storage":"external-artifact-root"},{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"1b2c20fa74295cf882d591f1396871e6c2fc0ef4bcd6139d8dcffd836652a621","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"99dda60b8f144435e19cb6820bbf2bcb46d91d4377b1cde58ea43208da9732ab","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-8.58738,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"anthraquinone","molecule_id":"NP016","molecule_input_sha256":"d6d1d370cdd84a60a250be917c8d1f1dc56cd08aab235dd886b63d02ef78fc09","molecule_name":"Emodin","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-04/NP016_seed41/NP016_seed41.sdf","pose_id":"NP016-seed41-mode1","pose_score":-8.58738,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2816,"role":"prepared-ligand-input","sha256":"d6d1d370cdd84a60a250be917c8d1f1dc56cd08aab235dd886b63d02ef78fc09","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1996562336},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"RHMXXJGYXNZAPX-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"RHMXXJGYXNZAPX-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP016","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-8.58738,"median_top_score_kcal_mol":-8.58738,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-8.58738,-8.21351,-8.09168,-8.02175,-7.92446,-7.75079,-7.38402,-7.2405,-7.22059],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"1b2c20fa74295cf882d591f1396871e6c2fc0ef4bcd6139d8dcffd836652a621","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-8.58738}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"bba7f07480144aa1096e691b5da10134fcaf68f2e77dbb273d263d756fb1795f","storage":"external-artifact-root"},{"bytes":2272,"role":"prepared-ligand-input","sha256":"55bd0689342343a9de42d20609bd76d3d710c80393577f07cd0d1d587e341577","storage":"external-artifact-root"},{"bytes":14054,"role":"execution-receipt","sha256":"adc898e44090412c0c228bdf2705323e5d54a234977159839930f32708355a41","storage":"external-artifact-root"},{"bytes":10440,"role":"pose-ensemble-sdf","sha256":"9ead6e9fb5700dd489c772bded7b1e4debcf8a0f1f620e0ec7ac852cbdbc0bb8","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"c8409ce8d86283ff9f2773ef33dea29adaca9e47f2aa8721456e7650c21ccd51","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-6.31337,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"quinone","molecule_id":"NP017","molecule_input_sha256":"55bd0689342343a9de42d20609bd76d3d710c80393577f07cd0d1d587e341577","molecule_name":"Thymoquinone","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-05/NP017_seed41/NP017_seed41.sdf","pose_id":"NP017-seed41-mode1","pose_score":-6.31337,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2272,"role":"prepared-ligand-input","sha256":"55bd0689342343a9de42d20609bd76d3d710c80393577f07cd0d1d587e341577","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":933691933},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"KEQHJBNSCLWCAE-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"KEQHJBNSCLWCAE-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP017","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-6.31337,"median_top_score_kcal_mol":-6.31337,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-6.31337,-5.78804,-5.68709,-5.54488,-5.44408,-5.31741,-5.15539,-5.14967,-5.04655],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":10440,"role":"pose-ensemble-sdf","sha256":"9ead6e9fb5700dd489c772bded7b1e4debcf8a0f1f620e0ec7ac852cbdbc0bb8","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-6.31337}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"bba7f07480144aa1096e691b5da10134fcaf68f2e77dbb273d263d756fb1795f","storage":"external-artifact-root"},{"bytes":2001,"role":"prepared-ligand-input","sha256":"6a08ae960eb8604457a59eda35a66e8f58a4b05d592e58123dbef4c4125eb092","storage":"external-artifact-root"},{"bytes":14054,"role":"execution-receipt","sha256":"adc898e44090412c0c228bdf2705323e5d54a234977159839930f32708355a41","storage":"external-artifact-root"},{"bytes":8667,"role":"pose-ensemble-sdf","sha256":"6839faef6befb7add91a8bcf6b503d016b525ff7370803d53ebc407cfb0ea87c","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"0f268c1359ee5553a6b97c3233a4c2a873442ca5cc2f0d68baf9adce9b0897cf","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-3.60602,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"isothiocyanate","molecule_id":"NP018","molecule_input_sha256":"6a08ae960eb8604457a59eda35a66e8f58a4b05d592e58123dbef4c4125eb092","molecule_name":"Sulforaphane (stereochemistry unspecified)","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-05/NP018_seed41/NP018_seed41.sdf","pose_id":"NP018-seed41-mode1","pose_score":-3.60602,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2001,"role":"prepared-ligand-input","sha256":"6a08ae960eb8604457a59eda35a66e8f58a4b05d592e58123dbef4c4125eb092","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":991510760},"formal_charge":0,"identity_relation":"3D geometry instantiates a source-unspecified stereocenter; parent identity remains the source InChIKey","inchikey":"SUVMJBTUFCVSAD-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"SUVMJBTUFCVSAD-SNVBAGLBSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":["1"]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP018","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-3.60602,"median_top_score_kcal_mol":-3.60602,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-3.60602,-3.60349,-3.59049,-3.49011,-3.48228,-3.41018,-3.40877,-3.34225,-3.33605],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":8667,"role":"pose-ensemble-sdf","sha256":"6839faef6befb7add91a8bcf6b503d016b525ff7370803d53ebc407cfb0ea87c","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-3.60602}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"bba7f07480144aa1096e691b5da10134fcaf68f2e77dbb273d263d756fb1795f","storage":"external-artifact-root"},{"bytes":7135,"role":"prepared-ligand-input","sha256":"2447304dc45cd1ac1acac75c8211d68db3272417b4e1fbb066f2c72017eb9a57","storage":"external-artifact-root"},{"bytes":14054,"role":"execution-receipt","sha256":"adc898e44090412c0c228bdf2705323e5d54a234977159839930f32708355a41","storage":"external-artifact-root"},{"bytes":29547,"role":"pose-ensemble-sdf","sha256":"f1163d166d6ddf9b3016762dc8c3370bc4c2915c2aa88fa9ab5e57c539a15c94","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"98ba75991c290cfba97c78302e5f720d464387b03dd892ef14d23eabddde1041","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-7.83344,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"pentacyclic-triterpenoid","molecule_id":"NP019","molecule_input_sha256":"2447304dc45cd1ac1acac75c8211d68db3272417b4e1fbb066f2c72017eb9a57","molecule_name":"Ursolic acid","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-05/NP019_seed41/NP019_seed41.sdf","pose_id":"NP019-seed41-mode1","pose_score":-7.83344,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":7135,"role":"prepared-ligand-input","sha256":"2447304dc45cd1ac1acac75c8211d68db3272417b4e1fbb066f2c72017eb9a57","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":302812137},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"WCGUUGGRBIKTOS-GPOJBZKASA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"WCGUUGGRBIKTOS-GPOJBZKASA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP019","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-7.83344,"median_top_score_kcal_mol":-7.83344,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-7.83344,-7.68295,-7.28488,-6.84992,-6.84504,-6.82806,-6.81531,-6.5307,-6.47242],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":29547,"role":"pose-ensemble-sdf","sha256":"f1163d166d6ddf9b3016762dc8c3370bc4c2915c2aa88fa9ab5e57c539a15c94","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-7.83344}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"bba7f07480144aa1096e691b5da10134fcaf68f2e77dbb273d263d756fb1795f","storage":"external-artifact-root"},{"bytes":7127,"role":"prepared-ligand-input","sha256":"d39baea9fda40feff116bdf7e15712dbc3934e0e70508f3e3559f351574e14d7","storage":"external-artifact-root"},{"bytes":14054,"role":"execution-receipt","sha256":"adc898e44090412c0c228bdf2705323e5d54a234977159839930f32708355a41","storage":"external-artifact-root"},{"bytes":29547,"role":"pose-ensemble-sdf","sha256":"86e1c4f971c759b1a939220fb0543a98fe9cc79bd0c0d594d122b5ce75015409","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"ef1cee9f2cf667049059c10301684302270d6260dcf01e931d97c4d78ad269d1","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-8.06116,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"pentacyclic-triterpenoid","molecule_id":"NP020","molecule_input_sha256":"d39baea9fda40feff116bdf7e15712dbc3934e0e70508f3e3559f351574e14d7","molecule_name":"Oleanolic acid","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-05/NP020_seed41/NP020_seed41.sdf","pose_id":"NP020-seed41-mode1","pose_score":-8.06116,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":7127,"role":"prepared-ligand-input","sha256":"d39baea9fda40feff116bdf7e15712dbc3934e0e70508f3e3559f351574e14d7","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":379731777},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"MIJYXULNPSFWEK-GTOFXWBISA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"MIJYXULNPSFWEK-GTOFXWBISA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP020","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-8.06116,"median_top_score_kcal_mol":-8.06116,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-8.06116,-7.74544,-7.04563,-6.98003,-6.89267,-6.87987,-6.5311,-6.32678,-6.31636],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":29547,"role":"pose-ensemble-sdf","sha256":"86e1c4f971c759b1a939220fb0543a98fe9cc79bd0c0d594d122b5ce75015409","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-8.06116}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"2178228edc960c4a404f8936a4d8ff2ddf8ad8ec94faeca63854a6a0ad4e3e24","storage":"external-artifact-root"},{"bytes":6410,"role":"prepared-ligand-input","sha256":"b487ec68197de45af13be56642e0f8156c85f4bb9ba6c18558ac5241bd3bd03f","storage":"external-artifact-root"},{"bytes":14055,"role":"execution-receipt","sha256":"752d7c76f9643588fd358122174932c57dc90e8d92bff1dfc373a70ac04cc887","storage":"external-artifact-root"},{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"dfe5ff92d8465954792b039bcd7eee4eaf47c959c2031e6b33a6d784e94cfc7b","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"0ba170d4c614fc21e1007978fd5e63bc1fb2654cb10ac525ae4a8717065c7736","storage":"external-artifact-root"},{"bytes":2353,"role":"request-spec","sha256":"d560c74368a50bdcb68002381be77613c7be3fd92132afceaa4dc7f095e2b40f","storage":"external-artifact-root"},{"bytes":12158,"role":"execution-receipt","sha256":"2a28829467793da15076361c68d3bdb96166a2dabbdb8b17dc3d949150fed61e","storage":"external-artifact-root"},{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"df6987c9336bdae6adb88a08c3a58d536488dda064b8566aed90f6f9cd5e087b","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"89d25cb005a6007957956e6db7d755fd9497ad98f24928865af5bd01f47c0b80","storage":"external-artifact-root"},{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"ba77588cc77e93cda23d681a5e5abfba8e739326339c2fed705d19a568f6998b","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"07ed4652cc713e79ca3d9af5fcaa5a004b3fa127ff1ccc9bf9a46181d12c025c","storage":"external-artifact-root"},{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"f7e56e82bf7b55c867851b39eeff999a6f3405c5fcd5725a755949def2c43cf8","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"d5b5b9a7b4a6a8949afa2df2a39ac2141627efc06cc5ce7504d373ba40a78185","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.43117,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":{"evidence_class":"computational-screening-hypothesis","interpretation":"Passing supports repeatable pose scoring and site occupancy under this one Smina/Vinardo protocol. It does not establish binding, affinity, selectivity, target inhibition, exposure, or therapeutic effect.","overall_gate_pass":true,"pose_geometry":{"all_top_poses_contact_declared_site":true,"all_top_poses_inside_declared_box":true,"all_top_poses_no_severe_clashes":true,"contact_persistence_gate_pass":true,"contacted_site_residue_union":["A:ARG123","A:GLU203","A:GLU204","A:GLY735","A:HIS734","A:PHE350","A:PHE351","A:SER624","A:TRP623","A:TYR541","A:TYR625","A:TYR660"],"contacted_site_residues_in_every_seed":["A:ARG123","A:GLU203","A:GLU204","A:GLY735","A:HIS734","A:PHE350","A:PHE351","A:SER624","A:TRP623","A:TYR541","A:TYR625","A:TYR660"],"geometry_gate_pass":true,"mean_pairwise_contact_jaccard":1.0,"minimum_pairwise_contact_jaccard":1.0,"per_seed":[{"contacted_site_residue_count":12,"contacted_site_residues":["A:ARG123","A:GLU203","A:GLU204","A:GLY735","A:HIS734","A:PHE350","A:PHE351","A:SER624","A:TRP623","A:TYR541","A:TYR625","A:TYR660"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"df6987c9336bdae6adb88a08c3a58d536488dda064b8566aed90f6f9cd5e087b","storage":"external-artifact-root"},"seed":11,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-9.42958},{"contacted_site_residue_count":12,"contacted_site_residues":["A:ARG123","A:GLU203","A:GLU204","A:GLY735","A:HIS734","A:PHE350","A:PHE351","A:SER624","A:TRP623","A:TYR541","A:TYR625","A:TYR660"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"ba77588cc77e93cda23d681a5e5abfba8e739326339c2fed705d19a568f6998b","storage":"external-artifact-root"},"seed":29,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-9.42891},{"contacted_site_residue_count":12,"contacted_site_residues":["A:ARG123","A:GLU203","A:GLU204","A:GLY735","A:HIS734","A:PHE350","A:PHE351","A:SER624","A:TRP623","A:TYR541","A:TYR625","A:TYR660"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"f7e56e82bf7b55c867851b39eeff999a6f3405c5fcd5725a755949def2c43cf8","storage":"external-artifact-root"},"seed":47,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-9.42412}],"persistent_site_residue_count":12},"requested_seed_count":3,"score_repeatability":{"maximum_span_kcal_mol":1.0,"pass":true,"top_score_span_kcal_mol":0.00546},"state":"same-protocol-confirmation-passed","successful_seed_count":3},"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"withanolide","molecule_id":"NP021","molecule_input_sha256":"b487ec68197de45af13be56642e0f8156c85f4bb9ba6c18558ac5241bd3bd03f","molecule_name":"Withaferin A","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-06/NP021_seed41/NP021_seed41.sdf","pose_id":"NP021-seed41-mode1","pose_score":-9.43117,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":6410,"role":"prepared-ligand-input","sha256":"b487ec68197de45af13be56642e0f8156c85f4bb9ba6c18558ac5241bd3bd03f","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1340987071},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"DBRXOUCRJQVYJQ-CKNDUULBSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"DBRXOUCRJQVYJQ-CKNDUULBSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP021","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.427536666666667,"median_top_score_kcal_mol":-9.42891,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.002977823590028766,"top_score_span_kcal_mol":0.005459999999999354},"seed_observations":[{"affinities_kcal_mol":[-9.43117,-8.30218,-8.29495,-8.18879,-7.68652,-7.45407,-7.44695,-7.29003,-7.28457],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"dfe5ff92d8465954792b039bcd7eee4eaf47c959c2031e6b33a6d784e94cfc7b","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-9.43117},{"affinities_kcal_mol":[-9.42958,-8.305,-8.2892,-8.18588,-7.78835,-7.69642,-7.69264,-7.6237,-7.57738],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"df6987c9336bdae6adb88a08c3a58d536488dda064b8566aed90f6f9cd5e087b","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":11,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-9.42958},{"affinities_kcal_mol":[-9.42891,-8.30846,-8.2882,-8.19266,-7.67633,-7.61747,-7.5899,-7.58378,-7.53465],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"ba77588cc77e93cda23d681a5e5abfba8e739326339c2fed705d19a568f6998b","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":29,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-9.42891},{"affinities_kcal_mol":[-9.42412,-8.30067,-8.27899,-8.18422,-8.05051,-7.78946,-7.72985,-7.65375,-7.62807],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"f7e56e82bf7b55c867851b39eeff999a6f3405c5fcd5725a755949def2c43cf8","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":47,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-9.42412}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"2178228edc960c4a404f8936a4d8ff2ddf8ad8ec94faeca63854a6a0ad4e3e24","storage":"external-artifact-root"},{"bytes":6290,"role":"prepared-ligand-input","sha256":"10fc3cd109898628855f6748ee3c77f090890de6a228ef4d5344184410f61ec8","storage":"external-artifact-root"},{"bytes":14055,"role":"execution-receipt","sha256":"752d7c76f9643588fd358122174932c57dc90e8d92bff1dfc373a70ac04cc887","storage":"external-artifact-root"},{"bytes":29547,"role":"pose-ensemble-sdf","sha256":"a023d16adc0077caa4005fb31692b96237fa6e7d5fe3453ecc51cd45306d49f2","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"510aa65b4c7d091b2ad12084975f946edd5e3f11ef4dcfa05ca96e7551aa4774","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-8.5226,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"quinone-methide-triterpenoid","molecule_id":"NP022","molecule_input_sha256":"10fc3cd109898628855f6748ee3c77f090890de6a228ef4d5344184410f61ec8","molecule_name":"Celastrol","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-06/NP022_seed41/NP022_seed41.sdf","pose_id":"NP022-seed41-mode1","pose_score":-8.5226,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":6290,"role":"prepared-ligand-input","sha256":"10fc3cd109898628855f6748ee3c77f090890de6a228ef4d5344184410f61ec8","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1316587678},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"KQJSQWZMSAGSHN-JJWQIEBTSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"KQJSQWZMSAGSHN-JJWQIEBTSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP022","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-8.5226,"median_top_score_kcal_mol":-8.5226,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-8.5226,-7.96573,-7.82526,-7.55084,-7.20167,-7.1527,-7.10608,-6.81826,-6.78835],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":29547,"role":"pose-ensemble-sdf","sha256":"a023d16adc0077caa4005fb31692b96237fa6e7d5fe3453ecc51cd45306d49f2","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-8.5226}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"2178228edc960c4a404f8936a4d8ff2ddf8ad8ec94faeca63854a6a0ad4e3e24","storage":"external-artifact-root"},{"bytes":3846,"role":"prepared-ligand-input","sha256":"234a77a88a53feb42a3dae38d675f268b3d5a0dcfcb8004a09c5ad2ceebe5bbf","storage":"external-artifact-root"},{"bytes":14055,"role":"execution-receipt","sha256":"752d7c76f9643588fd358122174932c57dc90e8d92bff1dfc373a70ac04cc887","storage":"external-artifact-root"},{"bytes":17361,"role":"pose-ensemble-sdf","sha256":"5ba372cf5a930e326e666b9a71a1a438d5824590d6278f9790c3bc85531ce556","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"7458b94e64c747db44484ba3d394b096b7ca0e50c723e3d4d6e7c7408b22ae75","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-6.56526,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"sesquiterpene-lactone","molecule_id":"NP023","molecule_input_sha256":"234a77a88a53feb42a3dae38d675f268b3d5a0dcfcb8004a09c5ad2ceebe5bbf","molecule_name":"Artemisinin","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-06/NP023_seed41/NP023_seed41.sdf","pose_id":"NP023-seed41-mode1","pose_score":-6.56526,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3846,"role":"prepared-ligand-input","sha256":"234a77a88a53feb42a3dae38d675f268b3d5a0dcfcb8004a09c5ad2ceebe5bbf","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1516426124},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"BLUAFEHZUWYNDE-NNWCWBAJSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"BLUAFEHZUWYNDE-NNWCWBAJSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP023","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-6.56526,"median_top_score_kcal_mol":-6.56526,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-6.56526,-6.42968,-6.29427,-6.10608,-5.96917,-5.94113,-5.92646,-5.60031,-5.59812],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":17361,"role":"pose-ensemble-sdf","sha256":"5ba372cf5a930e326e666b9a71a1a438d5824590d6278f9790c3bc85531ce556","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-6.56526}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":478232,"role":"prepared-receptor-input","sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","storage":"external-artifact-root"},{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"},{"bytes":3038,"role":"request-spec","sha256":"2178228edc960c4a404f8936a4d8ff2ddf8ad8ec94faeca63854a6a0ad4e3e24","storage":"external-artifact-root"},{"bytes":3495,"role":"prepared-ligand-input","sha256":"4516a599c513c75adfe5ddbdaca87f9659694b6e94d5319548a3b588630f040e","storage":"external-artifact-root"},{"bytes":14055,"role":"execution-receipt","sha256":"752d7c76f9643588fd358122174932c57dc90e8d92bff1dfc373a70ac04cc887","storage":"external-artifact-root"},{"bytes":15588,"role":"pose-ensemble-sdf","sha256":"7b1fba1aee8e899b2046381a7e22525b1480d671960f171f1789f62e068412d4","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"9e39b9f7b66e9b941defd36197cdf252502b2732d862de73f4efb2c0dedff726","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-5.54332,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[41.991857,-72.891943,85.148],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"A","compartment":"extracellular ectodomain","pdb_id":"6Y0F","receptor_input_sha256":"22a195feb7180fe77bb88f6e5b2f71fc4b1115b8a2351d0fe37e87661ae5d120","source_coordinate":{"bytes":4515536,"role":"experimental-source-coordinate","sha256":"c8c1bf28d029050f89ab35090bdb059cd3909aa71b2070cf05bc1cbcd516b574","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","molecular_class":"sesquiterpene-lactone","molecule_id":"NP024","molecule_input_sha256":"4516a599c513c75adfe5ddbdaca87f9659694b6e94d5319548a3b588630f040e","molecule_name":"Parthenolide","pose_artifact":"model-runs/fap-6y0f-smina-chargeaware-v1/outputs/natural-product-primary-screen/batch-06/NP024_seed41/NP024_seed41.sdf","pose_id":"NP024-seed41-mode1","pose_score":-5.54332,"provenance":{"environment_identities":["fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22"],"identity_verification_states":["full-app-source-sha256-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","run_manifest_sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029"},"provider":"fal Serverless","receptor_preparation":{"method":"pdb2pqr-propka-amber-ph7.4+openbabel-rigid-pdbqt/v1","ph":7.4,"preparation_limit":"PDB2PQR 3.7.1 and PROPKA 3.5.1 at pH 7.4 with AMBER partial charges; Open Babel 3.1.1.22 rigid AD4 PDBQT"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3495,"role":"prepared-ligand-input","sha256":"4516a599c513c75adfe5ddbdaca87f9659694b6e94d5319548a3b588630f040e","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1576420233},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"KTEXNACQROZXEV-SLXBATTESA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"KTEXNACQROZXEV-SLXBATTESA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"FAP-6Y0F-356-smina-v1","screen_role":"prospective","screening_result_id":"SR-FAP-6Y0F-356-smina-v1-NP024","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-5.54332,"median_top_score_kcal_mol":-5.54332,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-5.54332,-5.48556,-5.34229,-5.23632,-5.22705,-5.12476,-5.11102,-5.1007,-5.0726],"environment_identity":"fal-surface-atlas-smina-v2:M:0:python-3.11:smina.static:ffe5e1e78c947f76:pdb2pqr:3.7.1:propka:3.5.1:openbabel-wheel:3.1.1.22","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+pdb2pqr@3.7.1+propka@3.5.1+openbabel-wheel@3.1.1.22+app-652fa9abed97b09a","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":15588,"role":"pose-ensemble-sdf","sha256":"7b1fba1aee8e899b2046381a7e22525b1480d671960f171f1789f62e068412d4","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-5.54332}],"site":"6Y0F chain A deposited-ligand pocket","site_id":"FAP-6Y0F-356-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000078098","target_name":"FAP","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2041,"role":"request-spec","sha256":"72b669c1a06f1e6db7f19d9cdaa15073afb9e74224ca51079004d24316beffca","storage":"external-artifact-root"},{"bytes":3759,"role":"prepared-ligand-input","sha256":"f0536ad9b7f97a0e62b747c25fc5e71459855a1bde9d8165262451783048d8e0","storage":"external-artifact-root"},{"bytes":2722,"role":"execution-receipt","sha256":"58b39dcb63fc3b9365a281fd29c8731806e8c6772c4df167ce071ec16fd625bc","storage":"external-artifact-root"},{"bytes":29218,"role":"pose-ensemble-sdf","sha256":"22191481dd861abafcd7199ee4e8850bd5163300fd4b1c7439c8958bfd3259d8","storage":"external-artifact-root"},{"bytes":2362,"role":"smina-log","sha256":"5f4a439ff53f2754b3f3701f7887f94ed172281f37e4160fa18364d36f08bd95","storage":"external-artifact-root"},{"bytes":2077,"role":"request-spec","sha256":"2e7709800dd431b6f055d329ccdbf826bbc656e6ac646276d4955dde198268b1","storage":"external-artifact-root"},{"bytes":6515,"role":"execution-receipt","sha256":"c5d16bf2a7386d8c33b3826b1dbd3c4afc222f6691bfc63db3f8a9e0d764c163","storage":"external-artifact-root"},{"bytes":37566,"role":"pose-ensemble-sdf","sha256":"361a06d9d6330d9df58613faeeba97c4eb1132c26392e75f8343e4203a7bf065","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"6f1eef49387c0a0e0a847afdded812bf04b301fdc493eb768b3e9f5cb4f1739e","storage":"external-artifact-root"},{"bytes":37566,"role":"pose-ensemble-sdf","sha256":"81ca1db0b772234c43279644c5e5ae535e05f2785c0a66c715bd0066c7486154","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"ed2f9b44df6b6570802db1d10ab1d141c738e740bc54efdf322e1f0ee94a65a9","storage":"external-artifact-root"},{"bytes":29217,"role":"pose-ensemble-sdf","sha256":"2d0fdffa721fb123c494c1964943f8dc6a15e1b3ddfcb72acdede2c2e857797f","storage":"external-artifact-root"},{"bytes":2366,"role":"smina-log","sha256":"911a45940864145835a70c2a077e37071ab3d8a5ab1e9de7cd19825967057bbc","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-12.71832,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"positive-control","control_type":"positive-control","docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"nucleotide-analogue","molecule_id":"RF019","molecule_input_sha256":"f0536ad9b7f97a0e62b747c25fc5e71459855a1bde9d8165262451783048d8e0","molecule_name":"CD73 compound 21 (PDB CCD A1JCG)","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/positive-control-confirmation/RF019_seed47/RF019_seed47.sdf","pose_id":"RF019-seed47-mode1","pose_score":-12.71832,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3759,"role":"prepared-ligand-input","sha256":"f0536ad9b7f97a0e62b747c25fc5e71459855a1bde9d8165262451783048d8e0","storage":"external-artifact-root"},"identity_relation":"deposited-component-matches-library-identity","inchikey":"PVVWULAPDGYSNQ-XTKAHFKISA-N","microstate":{"protonation":"PDB chemical component definition; crystallographic hydrogens absent","state":"deposited-chemical-component","tautomer":"PDB chemical component definition"},"prepared_inchikey":"PVVWULAPDGYSNQ-XTKAHFKISA-N","state":"deposited-crystal-heavy-atom-conformer"},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"positive-control","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-RF019","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-12.70145,"median_top_score_kcal_mol":-12.6988,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":32,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"positive-control-confirmation\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.015713494200845664,"top_score_span_kcal_mol":0.031090000000000728},"seed_observations":[{"affinities_kcal_mol":[-12.64587,-12.07674,-11.90657,-10.74301,-10.58841,-10.48804,-10.26017],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":8,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":29218,"role":"pose-ensemble-sdf","sha256":"22191481dd861abafcd7199ee4e8850bd5163300fd4b1c7439c8958bfd3259d8","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":8,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"positive-control-canary\"}","returncode":0,"seed":1,"stage_id":"positive-control-canary","top_vinardo_score_kcal_mol":-12.64587},{"affinities_kcal_mol":[-12.68723,-12.27482,-11.9414,-11.35381,-11.2657,-10.94529,-10.89612,-10.88131,-10.74463],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":32,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":37566,"role":"pose-ensemble-sdf","sha256":"361a06d9d6330d9df58613faeeba97c4eb1132c26392e75f8343e4203a7bf065","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":32,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"positive-control-confirmation\"}","returncode":0,"seed":11,"stage_id":"positive-control-confirmation","top_vinardo_score_kcal_mol":-12.68723},{"affinities_kcal_mol":[-12.6988,-12.15653,-12.09259,-11.93955,-11.30798,-10.99738,-10.81829,-10.78889,-10.14052],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":32,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":37566,"role":"pose-ensemble-sdf","sha256":"81ca1db0b772234c43279644c5e5ae535e05f2785c0a66c715bd0066c7486154","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":32,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"positive-control-confirmation\"}","returncode":0,"seed":29,"stage_id":"positive-control-confirmation","top_vinardo_score_kcal_mol":-12.6988},{"affinities_kcal_mol":[-12.71832,-12.29278,-12.25611,-11.95352,-10.39832,-10.37029,-9.9358],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":32,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":29217,"role":"pose-ensemble-sdf","sha256":"2d0fdffa721fb123c494c1964943f8dc6a15e1b3ddfcb72acdede2c2e857797f","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":32,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"positive-control-confirmation\"}","returncode":0,"seed":47,"stage_id":"positive-control-confirmation","top_vinardo_score_kcal_mol":-12.71832}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2068,"role":"request-spec","sha256":"ff5c24ac6dfbbcd146179cdc540a8f0b5b651bf4abdb95054afed6575cb8d1a6","storage":"external-artifact-root"},{"bytes":7170,"role":"prepared-ligand-input","sha256":"d6d1c4dcc082824f806fd9964c6572633ae91946f25ca09fe8ca094db7e44e23","storage":"external-artifact-root"},{"bytes":6292,"role":"execution-receipt","sha256":"26c89f778b6e9d977c8c1cfbdaeadb245be3fcc18c85f937e862c3044d5bdbd7","storage":"external-artifact-root"},{"bytes":27900,"role":"pose-ensemble-sdf","sha256":"86aa51d5a1b85e236579c723650ff2347712b0b72d8d9a563af1addd9fb938bb","storage":"external-artifact-root"},{"bytes":2286,"role":"smina-log","sha256":"c8bce102625cb17ac965481f8ae5fd943f28df202fd1be8299053dab06932dca","storage":"external-artifact-root"},{"bytes":18600,"role":"pose-ensemble-sdf","sha256":"dfae346a07070cd0850ccaf30d1f8611cde04e99808cbe5a25324d05461536b6","storage":"external-artifact-root"},{"bytes":2126,"role":"smina-log","sha256":"660bd7e415ac04886d8a52259a95bcc559cc0328f122590458e781f51fb95da5","storage":"external-artifact-root"},{"bytes":23250,"role":"pose-ensemble-sdf","sha256":"9e7f9a5f0fb2a0868607fa5ad44a74d8b46dc17257ecae8fc7c5c3f671687451","storage":"external-artifact-root"},{"bytes":2206,"role":"smina-log","sha256":"e08cdecb53a286bb24e08e46e30795bcae66ad184797d9670b02c8b17731ccfb","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-8.12624,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"noncognate-control","control_type":"noncognate-control","docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"cyclic-peptide","molecule_id":"RF013","molecule_input_sha256":"d6d1c4dcc082824f806fd9964c6572633ae91946f25ca09fe8ca094db7e44e23","molecule_name":"Cilengitide","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/noncognate-controls/rf013/RF013_seed11/RF013_seed11.sdf","pose_id":"RF013-seed11-mode1","pose_score":-8.12624,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":3,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":7170,"role":"prepared-ligand-input","sha256":"d6d1c4dcc082824f806fd9964c6572633ae91946f25ca09fe8ca094db7e44e23","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1847742512},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"AMLYAMJWYAIXIA-VWNVYAMZSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"AMLYAMJWYAIXIA-VWNVYAMZSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"noncognate-control","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-RF013","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-8.01037,"median_top_score_kcal_mol":-7.96375,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.10098228508010662,"top_score_span_kcal_mol":0.1851199999999995},"seed_observations":[{"affinities_kcal_mol":[-8.12624,-6.68202,-6.60678,-6.2529,-5.61644,-5.36937],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":27900,"role":"pose-ensemble-sdf","sha256":"86aa51d5a1b85e236579c723650ff2347712b0b72d8d9a563af1addd9fb938bb","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":11,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-8.12624},{"affinities_kcal_mol":[-7.94112,-6.60456,-6.07975,-5.44291],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":18600,"role":"pose-ensemble-sdf","sha256":"dfae346a07070cd0850ccaf30d1f8611cde04e99808cbe5a25324d05461536b6","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":29,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-7.94112},{"affinities_kcal_mol":[-7.96375,-6.59754,-6.23441,-5.97167,-5.13069],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":23250,"role":"pose-ensemble-sdf","sha256":"9e7f9a5f0fb2a0868607fa5ad44a74d8b46dc17257ecae8fc7c5c3f671687451","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":47,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-7.96375}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":3,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2068,"role":"request-spec","sha256":"cf339f8b7e47c26e3ea8c66b0b41ab4ac94ce0d49858b59e9c23fa9d17918520","storage":"external-artifact-root"},{"bytes":5802,"role":"prepared-ligand-input","sha256":"653f29f0eca620296270f1cc171dcc879da78d7b18e716c16608e2a9421ffd3d","storage":"external-artifact-root"},{"bytes":6526,"role":"execution-receipt","sha256":"bd0dc2232f198d52a940bd559232ca53251abd5a16b3a4eb6eb3be50d060b03a","storage":"external-artifact-root"},{"bytes":27434,"role":"pose-ensemble-sdf","sha256":"7cef5062224d0ca379e37afe312f61d8ae63bf3bdc119a314f39358b871b40e1","storage":"external-artifact-root"},{"bytes":2525,"role":"smina-log","sha256":"10d67c0525437f56ad9abb178e356e2a84f23b6c1e555e7a6279f8abcea09fb0","storage":"external-artifact-root"},{"bytes":27432,"role":"pose-ensemble-sdf","sha256":"fbcc99907423e75e788286cc3f25f8bfb4745dfaccb8a8c54779ffad2c40b20e","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"b1be09875765a7a264e897cd5d321ccb86eb9c635f4b188279f0be5918b96c21","storage":"external-artifact-root"},{"bytes":27433,"role":"pose-ensemble-sdf","sha256":"33df45c4d468be18ad2b435b28dcfdd498662e96dcf80cfa4997a194f6139636","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"19fe5ab4c864d825c6c1d38e6970d286a1282eeb6a19460a845384f59416b36b","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.13668,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"noncognate-control","control_type":"noncognate-control","docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"small-molecule","molecule_id":"RF014","molecule_input_sha256":"653f29f0eca620296270f1cc171dcc879da78d7b18e716c16608e2a9421ffd3d","molecule_name":"Tirofiban","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/noncognate-controls/rf014/RF014_seed47/RF014_seed47.sdf","pose_id":"RF014-seed47-mode1","pose_score":-10.13668,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":3,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":5802,"role":"prepared-ligand-input","sha256":"653f29f0eca620296270f1cc171dcc879da78d7b18e716c16608e2a9421ffd3d","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":630031347},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"COKMIXFXJJXBQG-NRFANRHFSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"COKMIXFXJJXBQG-NRFANRHFSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"noncognate-control","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-RF014","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.044696666666667,"median_top_score_kcal_mol":-10.06269,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.10217524374002392,"top_score_span_kcal_mol":0.2019599999999997},"seed_observations":[{"affinities_kcal_mol":[-10.06269,-10.06245,-9.93533,-9.79298,-9.7201,-9.54885,-9.32999,-9.25491,-9.1582],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":27434,"role":"pose-ensemble-sdf","sha256":"7cef5062224d0ca379e37afe312f61d8ae63bf3bdc119a314f39358b871b40e1","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":11,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-10.06269},{"affinities_kcal_mol":[-9.93472,-9.78916,-9.53969,-9.41152,-9.06675,-8.87887,-8.87088,-8.78658,-8.78156],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":27432,"role":"pose-ensemble-sdf","sha256":"fbcc99907423e75e788286cc3f25f8bfb4745dfaccb8a8c54779ffad2c40b20e","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":29,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-9.93472},{"affinities_kcal_mol":[-10.13668,-9.89746,-9.80205,-9.66441,-9.62178,-9.51986,-9.34437,-9.09385,-8.83413],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":27433,"role":"pose-ensemble-sdf","sha256":"33df45c4d468be18ad2b435b28dcfdd498662e96dcf80cfa4997a194f6139636","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":47,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-10.13668}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":3,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2068,"role":"request-spec","sha256":"a463605f0a970c313e756a079283f1d384c36cba9fc339884f89953c865087ec","storage":"external-artifact-root"},{"bytes":9218,"role":"prepared-ligand-input","sha256":"3e34948f3b21ca8a40f16bb028feba0db30aab886bd35b396412b3569f0ee397","storage":"external-artifact-root"},{"bytes":6130,"role":"execution-receipt","sha256":"4d935a5e73c0996fc571f99e3fa0f921e9bb2f29ad86ce14c0999819132671b5","storage":"external-artifact-root"},{"bytes":12758,"role":"pose-ensemble-sdf","sha256":"77d5b2b128ecf33862f6bef364a78de4fbbee84c88f33ac5f2c5b97e19b06491","storage":"external-artifact-root"},{"bytes":1966,"role":"smina-log","sha256":"90fe4c00d3cbac1f1328fe809f879ce42da38ee9d719c593ad9d9510eac9dcdf","storage":"external-artifact-root"},{"bytes":6379,"role":"pose-ensemble-sdf","sha256":"23011b246d3b5d457006c6207f96b975e8584be5698a4342a0b6944f14916c82","storage":"external-artifact-root"},{"bytes":1886,"role":"smina-log","sha256":"aef086a6f908d7545ea903d678579d4e5fbf8565b60255f852090d711bdebbd9","storage":"external-artifact-root"},{"bytes":19137,"role":"pose-ensemble-sdf","sha256":"bfef9cdf40a4aa8763870d59902127fbce341c500fd8e4b70c46f43dca759ea2","storage":"external-artifact-root"},{"bytes":2046,"role":"smina-log","sha256":"821c6732eef0f6eda71b41245073c739ad24ef96c665367052aa5a2adad5b537","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":20.65954,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"noncognate-control","control_type":"noncognate-control","docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"cyclic-peptide","molecule_id":"RF015","molecule_input_sha256":"3e34948f3b21ca8a40f16bb028feba0db30aab886bd35b396412b3569f0ee397","molecule_name":"Eptifibatide","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/noncognate-controls/rf015/RF015_seed11/RF015_seed11.sdf","pose_id":"RF015-seed11-mode1","pose_score":20.65954,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":3,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":9218,"role":"prepared-ligand-input","sha256":"3e34948f3b21ca8a40f16bb028feba0db30aab886bd35b396412b3569f0ee397","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":345859068},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"CZKPOZZJODAYPZ-LROMGURASA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"CZKPOZZJODAYPZ-LROMGURASA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"noncognate-control","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-RF015","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":22.89107,"median_top_score_kcal_mol":23.66153,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","seeds":[11,29,47],"state":"variable","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":1.963168395400659,"top_score_span_kcal_mol":3.6925999999999988},"seed_observations":[{"affinities_kcal_mol":[20.65954,22.10376],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":12758,"role":"pose-ensemble-sdf","sha256":"77d5b2b128ecf33862f6bef364a78de4fbbee84c88f33ac5f2c5b97e19b06491","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":11,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":20.65954},{"affinities_kcal_mol":[23.66153],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":6379,"role":"pose-ensemble-sdf","sha256":"23011b246d3b5d457006c6207f96b975e8584be5698a4342a0b6944f14916c82","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":29,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":23.66153},{"affinities_kcal_mol":[24.35214,25.91925,27.07089],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":19137,"role":"pose-ensemble-sdf","sha256":"bfef9cdf40a4aa8763870d59902127fbce341c500fd8e4b70c46f43dca759ea2","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":47,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":24.35214}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":3,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2068,"role":"request-spec","sha256":"3af99117bd4b4b981efc8de3819b7392e30fcfbeee7d0660c86f03fe741b02e1","storage":"external-artifact-root"},{"bytes":5317,"role":"prepared-ligand-input","sha256":"576935ea9811e88341ff624d02eabdb7c7a162f72bfdda359dae0be49d8c13bf","storage":"external-artifact-root"},{"bytes":6549,"role":"execution-receipt","sha256":"2ef2c260aee7e7c0c2f1356633ac99e9be2598866d8ab8ec21fbc138d0bccb1e","storage":"external-artifact-root"},{"bytes":27612,"role":"pose-ensemble-sdf","sha256":"84fe30148d93ed91f53fadfbd05b46b9d4be18662dfc85c7a3001b88b7c55745","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"9798d340255199be10b4662c745200001d7c30621fb1048f3cf4149bb43e6133","storage":"external-artifact-root"},{"bytes":27612,"role":"pose-ensemble-sdf","sha256":"85c7ad0a3b362061ec7e8f08b234d1d79f37d1ca495e5eded541f836048b7f9b","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"1b16b6aa0f9d0d6803a8bbbf513d6aed592361d019edd8e99b88313dabf0ba7f","storage":"external-artifact-root"},{"bytes":27612,"role":"pose-ensemble-sdf","sha256":"bc4a2c948c2c156a3320ecd791a5822731c0ed080ed495b8c1094dda3330b78e","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"54e8933df0597a2950890c06b0d104064c3edf61d20116885b38a67102e60f05","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-11.68026,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"noncognate-control","control_type":"noncognate-control","docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"small-molecule","molecule_id":"RF016","molecule_input_sha256":"576935ea9811e88341ff624d02eabdb7c7a162f72bfdda359dae0be49d8c13bf","molecule_name":"BMS-202","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/noncognate-controls/rf016/RF016_seed47/RF016_seed47.sdf","pose_id":"RF016-seed47-mode1","pose_score":-11.68026,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":3,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":5317,"role":"prepared-ligand-input","sha256":"576935ea9811e88341ff624d02eabdb7c7a162f72bfdda359dae0be49d8c13bf","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1902541988},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"JEDPSOYOYVELLZ-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"JEDPSOYOYVELLZ-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"noncognate-control","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-RF016","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-11.531043333333335,"median_top_score_kcal_mol":-11.65294,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.23518806354348243,"top_score_span_kcal_mol":0.42032999999999987},"seed_observations":[{"affinities_kcal_mol":[-11.25993,-11.20132,-11.08974,-11.07785,-11.06818,-11.03577,-11.0057,-10.90723,-10.75664],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":27612,"role":"pose-ensemble-sdf","sha256":"84fe30148d93ed91f53fadfbd05b46b9d4be18662dfc85c7a3001b88b7c55745","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":11,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-11.25993},{"affinities_kcal_mol":[-11.65294,-11.59041,-11.58971,-11.38821,-11.3691,-11.34238,-11.30553,-11.30057,-11.23571],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":27612,"role":"pose-ensemble-sdf","sha256":"85c7ad0a3b362061ec7e8f08b234d1d79f37d1ca495e5eded541f836048b7f9b","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":29,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-11.65294},{"affinities_kcal_mol":[-11.68026,-11.52067,-11.51928,-11.48958,-11.43662,-11.37037,-11.20914,-11.20346,-10.9059],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":27612,"role":"pose-ensemble-sdf","sha256":"bc4a2c948c2c156a3320ecd791a5822731c0ed080ed495b8c1094dda3330b78e","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"noncognate-controls\"}","returncode":0,"seed":47,"stage_id":"noncognate-controls","top_vinardo_score_kcal_mol":-11.68026}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":3,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"cd28af14abf8240c75b9c4ad31fffc42e2b1e35b96022f860e950330c35193d1","storage":"external-artifact-root"},{"bytes":4227,"role":"prepared-ligand-input","sha256":"8483619a629d5a7b34e9222725907329550c0159dcfeb5d5344c8585d875a35c","storage":"external-artifact-root"},{"bytes":8434,"role":"execution-receipt","sha256":"3b724b242a26393d5d8cbaaa5c0f32534db29a26992478dbbf0fa1b835e84a26","storage":"external-artifact-root"},{"bytes":24234,"role":"pose-ensemble-sdf","sha256":"7d337008f7c5f8bc7d81d43034a9113260a83becdd789f5838b4a0208c9b6413","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"800c44fcb653f7671d1137c3b36154fc0fed25755c89b5d4e5785de17233edd7","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.43093,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"polyphenol","molecule_id":"NP001","molecule_input_sha256":"8483619a629d5a7b34e9222725907329550c0159dcfeb5d5344c8585d875a35c","molecule_name":"Curcumin","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-01/NP001_seed41/NP001_seed41.sdf","pose_id":"NP001-seed41-mode1","pose_score":-10.43093,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":4227,"role":"prepared-ligand-input","sha256":"8483619a629d5a7b34e9222725907329550c0159dcfeb5d5344c8585d875a35c","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":766868418},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"VFLDPWHFBUODDF-FCXRPNKRSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"VFLDPWHFBUODDF-FCXRPNKRSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP001","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.43093,"median_top_score_kcal_mol":-10.43093,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-10.43093,-10.38972,-10.19776,-10.19183,-10.12469,-10.06057,-9.99469,-9.98839,-9.91608],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":24234,"role":"pose-ensemble-sdf","sha256":"7d337008f7c5f8bc7d81d43034a9113260a83becdd789f5838b4a0208c9b6413","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-10.43093}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"cd28af14abf8240c75b9c4ad31fffc42e2b1e35b96022f860e950330c35193d1","storage":"external-artifact-root"},{"bytes":2712,"role":"prepared-ligand-input","sha256":"f8e5d8e745f58a58c5ee85a68fac966b0acc96c56fc1fed75b8f461715137f15","storage":"external-artifact-root"},{"bytes":8434,"role":"execution-receipt","sha256":"3b724b242a26393d5d8cbaaa5c0f32534db29a26992478dbbf0fa1b835e84a26","storage":"external-artifact-root"},{"bytes":17019,"role":"pose-ensemble-sdf","sha256":"807dea5b4b062c572fdb501e0a165f1566b2d9d40a9399bd73cedf60ce836f5d","storage":"external-artifact-root"},{"bytes":2523,"role":"smina-log","sha256":"15c44c639810863b067a5d9ce17f2070a1ee941cf6eb89773d7da27c20c86205","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.71993,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"stilbenoid","molecule_id":"NP002","molecule_input_sha256":"f8e5d8e745f58a58c5ee85a68fac966b0acc96c56fc1fed75b8f461715137f15","molecule_name":"trans-Resveratrol","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-01/NP002_seed41/NP002_seed41.sdf","pose_id":"NP002-seed41-mode1","pose_score":-9.71993,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2712,"role":"prepared-ligand-input","sha256":"f8e5d8e745f58a58c5ee85a68fac966b0acc96c56fc1fed75b8f461715137f15","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1322299456},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"LUKBXSAWLPMMSZ-OWOJBTEDSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"LUKBXSAWLPMMSZ-OWOJBTEDSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP002","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.71993,"median_top_score_kcal_mol":-9.71993,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-9.71993,-9.67428,-9.6353,-9.61484,-9.09641,-8.99582,-8.95985,-8.95051,-8.93799],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":17019,"role":"pose-ensemble-sdf","sha256":"807dea5b4b062c572fdb501e0a165f1566b2d9d40a9399bd73cedf60ce836f5d","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-9.71993}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"cd28af14abf8240c75b9c4ad31fffc42e2b1e35b96022f860e950330c35193d1","storage":"external-artifact-root"},{"bytes":3212,"role":"prepared-ligand-input","sha256":"4a74fd70f87e56e8c1f6a39cb6b8fa7facdf1727aab699606e684698ddd08a54","storage":"external-artifact-root"},{"bytes":8434,"role":"execution-receipt","sha256":"3b724b242a26393d5d8cbaaa5c0f32534db29a26992478dbbf0fa1b835e84a26","storage":"external-artifact-root"},{"bytes":17019,"role":"pose-ensemble-sdf","sha256":"3140525983560fff18daa5a690a480c0c7698f916650322e7916abe80b717d10","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"011cd4a4970bf2bbe0baf29f56964cf2421e7b878dec5ef7b5ee95217ceb2c92","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.283,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"stilbenoid","molecule_id":"NP003","molecule_input_sha256":"4a74fd70f87e56e8c1f6a39cb6b8fa7facdf1727aab699606e684698ddd08a54","molecule_name":"Pterostilbene","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-01/NP003_seed41/NP003_seed41.sdf","pose_id":"NP003-seed41-mode1","pose_score":-9.283,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3212,"role":"prepared-ligand-input","sha256":"4a74fd70f87e56e8c1f6a39cb6b8fa7facdf1727aab699606e684698ddd08a54","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":987853854},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"VLEUZFDZJKSGMX-ONEGZZNKSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"VLEUZFDZJKSGMX-ONEGZZNKSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP003","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.283,"median_top_score_kcal_mol":-9.283,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-9.283,-9.24709,-9.20198,-9.07035,-9.04035,-9.02635,-9.01996,-9.00451,-8.9757],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":17019,"role":"pose-ensemble-sdf","sha256":"3140525983560fff18daa5a690a480c0c7698f916650322e7916abe80b717d10","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-9.283}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"cd28af14abf8240c75b9c4ad31fffc42e2b1e35b96022f860e950330c35193d1","storage":"external-artifact-root"},{"bytes":2986,"role":"prepared-ligand-input","sha256":"43a51333f5244200b9c69ecf4989fe8539f7cf34e99e4d928f21ea2ce1dc3626","storage":"external-artifact-root"},{"bytes":8434,"role":"execution-receipt","sha256":"3b724b242a26393d5d8cbaaa5c0f32534db29a26992478dbbf0fa1b835e84a26","storage":"external-artifact-root"},{"bytes":22806,"role":"pose-ensemble-sdf","sha256":"e34d995efcb0d96232a7756b1632c22713df0a2ecb0f99cf9d7dacff173d0320","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"8671a9f787537dcb4d88c30d833af0c1b28dd710913670afd3eff8fd55105d4c","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.77265,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"flavonol","molecule_id":"NP004","molecule_input_sha256":"43a51333f5244200b9c69ecf4989fe8539f7cf34e99e4d928f21ea2ce1dc3626","molecule_name":"Quercetin","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-01/NP004_seed41/NP004_seed41.sdf","pose_id":"NP004-seed41-mode1","pose_score":-10.77265,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2986,"role":"prepared-ligand-input","sha256":"43a51333f5244200b9c69ecf4989fe8539f7cf34e99e4d928f21ea2ce1dc3626","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":587695227},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"REFJWTPEDVJJIY-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"REFJWTPEDVJJIY-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP004","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.77265,"median_top_score_kcal_mol":-10.77265,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-10.77265,-10.62079,-10.60683,-10.54676,-10.54267,-10.23268,-10.07284,-10.05794,-10.02258],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":22806,"role":"pose-ensemble-sdf","sha256":"e34d995efcb0d96232a7756b1632c22713df0a2ecb0f99cf9d7dacff173d0320","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-10.77265}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"f5f1db3ce59f9fe400abab583fba3d794b024844211a69356c407a57f87bdcbd","storage":"external-artifact-root"},{"bytes":2900,"role":"prepared-ligand-input","sha256":"0db0e1fb6b5807f80c89039a0e26555415cee8d256c47b2742b5f390f30deb1a","storage":"external-artifact-root"},{"bytes":8450,"role":"execution-receipt","sha256":"82d73c60bf70058ef5bc5ab151d1e243f639fbb901f48016000794f5574b4a9a","storage":"external-artifact-root"},{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"0e0211c884f5b5a75a8977d305ed5f9c11b3ec6a1bc596fa52b13d76cab557f8","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"4d7f15897e2453ae8fb297d39142d5580e0d7d6ace10d29c59a7695717e241af","storage":"external-artifact-root"},{"bytes":2084,"role":"request-spec","sha256":"196397adbae99dc3d8372aff0c260700d37f3ea08ac9fcee1c7d3008aba357c7","storage":"external-artifact-root"},{"bytes":6549,"role":"execution-receipt","sha256":"0df5b7814d956f82ea4db634d993e11e551e3d84d011fc8f9905da59d1647ff1","storage":"external-artifact-root"},{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"b30fc2872e21593ecbf52f3524eabc2796422a43d4eb98e71dd5371203f252ca","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"0496b6a242b6b7279d762b8587053c51f014f530ef04984e9bc8e621fce60209","storage":"external-artifact-root"},{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"f3901b60a0b0af5a7d3908e5c2406607a3d0b28809019cf9d711e1d1d5472a32","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"f33cdbf02219d021cd06ae2b8f6adec3df69084110d1d48d7b9ab5144c85ffcc","storage":"external-artifact-root"},{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"ce748ce0fa7be1aad969a27aa2c418a44e3c329cf83b20298fe5af22c47b9581","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"7e32ca92efcbb2578d8994cd67bba8c3a0ac6e3748af35d8ea52a154f37715ed","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.78728,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":{"evidence_class":"computational-screening-hypothesis","interpretation":"Passing supports repeatable pose scoring and site occupancy under this one Smina/Vinardo protocol. It does not establish binding, affinity, selectivity, target inhibition, exposure, or therapeutic effect.","overall_gate_pass":true,"pose_geometry":{"all_top_poses_contact_declared_site":true,"all_top_poses_inside_declared_box":true,"all_top_poses_no_severe_clashes":true,"contact_persistence_gate_pass":true,"contacted_site_residue_union":["B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:HIS118","B:LEU184","B:LEU415","B:PHE417","B:PHE421","B:PHE500","B:PRO498","B:THR420"],"contacted_site_residues_in_every_seed":["B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:HIS118","B:LEU184","B:LEU415","B:PHE417","B:PHE421","B:PHE500","B:PRO498","B:THR420"],"geometry_gate_pass":true,"mean_pairwise_contact_jaccard":1.0,"minimum_pairwise_contact_jaccard":1.0,"per_seed":[{"contacted_site_residue_count":16,"contacted_site_residues":["B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:HIS118","B:LEU184","B:LEU415","B:PHE417","B:PHE421","B:PHE500","B:PRO498","B:THR420"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"b30fc2872e21593ecbf52f3524eabc2796422a43d4eb98e71dd5371203f252ca","storage":"external-artifact-root"},"seed":11,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.77361},{"contacted_site_residue_count":16,"contacted_site_residues":["B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:HIS118","B:LEU184","B:LEU415","B:PHE417","B:PHE421","B:PHE500","B:PRO498","B:THR420"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"f3901b60a0b0af5a7d3908e5c2406607a3d0b28809019cf9d711e1d1d5472a32","storage":"external-artifact-root"},"seed":29,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.7754},{"contacted_site_residue_count":16,"contacted_site_residues":["B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:HIS118","B:LEU184","B:LEU415","B:PHE417","B:PHE421","B:PHE500","B:PRO498","B:THR420"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"ce748ce0fa7be1aad969a27aa2c418a44e3c329cf83b20298fe5af22c47b9581","storage":"external-artifact-root"},"seed":47,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.78728}],"persistent_site_residue_count":16},"requested_seed_count":3,"score_repeatability":{"maximum_span_kcal_mol":1.0,"pass":true,"top_score_span_kcal_mol":0.01367},"state":"same-protocol-confirmation-passed","successful_seed_count":3},"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"flavone","molecule_id":"NP005","molecule_input_sha256":"0db0e1fb6b5807f80c89039a0e26555415cee8d256c47b2742b5f390f30deb1a","molecule_name":"Luteolin","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/promoted-set-replicate-docking/np005/NP005_seed47/NP005_seed47.sdf","pose_id":"NP005-seed47-mode1","pose_score":-10.78728,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2900,"role":"prepared-ligand-input","sha256":"0db0e1fb6b5807f80c89039a0e26555415cee8d256c47b2742b5f390f30deb1a","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":2084258712},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"IQPNAANSBPBGFQ-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"IQPNAANSBPBGFQ-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP005","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.778763333333332,"median_top_score_kcal_mol":-10.7754,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.00742975324848304,"top_score_span_kcal_mol":0.013670000000001181},"seed_observations":[{"affinities_kcal_mol":[-10.77522,-10.66643,-10.54035,-10.43373,-10.40183,-10.36299,-10.23412,-10.17751,-10.16601],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"0e0211c884f5b5a75a8977d305ed5f9c11b3ec6a1bc596fa52b13d76cab557f8","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-10.77522},{"affinities_kcal_mol":[-10.77361,-10.67754,-10.66065,-10.53512,-10.42865,-10.40197,-10.36641,-10.3293,-10.22924],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"b30fc2872e21593ecbf52f3524eabc2796422a43d4eb98e71dd5371203f252ca","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":11,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.77361},{"affinities_kcal_mol":[-10.7754,-10.67125,-10.6548,-10.53151,-10.43163,-10.39799,-10.39176,-10.3301,-10.23188],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"f3901b60a0b0af5a7d3908e5c2406607a3d0b28809019cf9d711e1d1d5472a32","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":29,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.7754},{"affinities_kcal_mol":[-10.78728,-10.68502,-10.6658,-10.53521,-10.43449,-10.39575,-10.39002,-10.33566,-10.23016],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"ce748ce0fa7be1aad969a27aa2c418a44e3c329cf83b20298fe5af22c47b9581","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":47,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.78728}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"f5f1db3ce59f9fe400abab583fba3d794b024844211a69356c407a57f87bdcbd","storage":"external-artifact-root"},{"bytes":2814,"role":"prepared-ligand-input","sha256":"3a456c6dcee1d7552d2030a9c5548a6d546d17b1c0d725b51110358a1d994ced","storage":"external-artifact-root"},{"bytes":8450,"role":"execution-receipt","sha256":"82d73c60bf70058ef5bc5ab151d1e243f639fbb901f48016000794f5574b4a9a","storage":"external-artifact-root"},{"bytes":19598,"role":"pose-ensemble-sdf","sha256":"eaabf65df7a074a1048da4b2c5f5b164e3ac686c45741890b0cbb6d304fe0d8f","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"91ba51b592d1b06d447b8e6cd5f7bb3d205027e3678820f2fddac18d09efa7f5","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.51227,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"flavone","molecule_id":"NP006","molecule_input_sha256":"3a456c6dcee1d7552d2030a9c5548a6d546d17b1c0d725b51110358a1d994ced","molecule_name":"Apigenin","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-02/NP006_seed41/NP006_seed41.sdf","pose_id":"NP006-seed41-mode1","pose_score":-10.51227,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2814,"role":"prepared-ligand-input","sha256":"3a456c6dcee1d7552d2030a9c5548a6d546d17b1c0d725b51110358a1d994ced","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":367188032},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"KZNIFHPLKGYRTM-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"KZNIFHPLKGYRTM-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP006","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.51227,"median_top_score_kcal_mol":-10.51227,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-10.51227,-10.49438,-10.34472,-10.18225,-10.08205,-9.93951,-9.84456,-9.77765,-9.77615],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":19598,"role":"pose-ensemble-sdf","sha256":"eaabf65df7a074a1048da4b2c5f5b164e3ac686c45741890b0cbb6d304fe0d8f","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-10.51227}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"f5f1db3ce59f9fe400abab583fba3d794b024844211a69356c407a57f87bdcbd","storage":"external-artifact-root"},{"bytes":2900,"role":"prepared-ligand-input","sha256":"70addd7430d6f3f7e80284690744f2b562ea7903f98d7b413c4e3b639d8a9f15","storage":"external-artifact-root"},{"bytes":8450,"role":"execution-receipt","sha256":"82d73c60bf70058ef5bc5ab151d1e243f639fbb901f48016000794f5574b4a9a","storage":"external-artifact-root"},{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"32a5164eafea119178f5f6b82901fc0a38cf43c283ee52a1f431c52d7c8496d3","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"50145b0333a3265329cfed47f676bdc07a841525036a9009a13d03cd21d27a71","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.71836,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"flavonol","molecule_id":"NP007","molecule_input_sha256":"70addd7430d6f3f7e80284690744f2b562ea7903f98d7b413c4e3b639d8a9f15","molecule_name":"Kaempferol","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-02/NP007_seed41/NP007_seed41.sdf","pose_id":"NP007-seed41-mode1","pose_score":-10.71836,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2900,"role":"prepared-ligand-input","sha256":"70addd7430d6f3f7e80284690744f2b562ea7903f98d7b413c4e3b639d8a9f15","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1750597481},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"IYRMWMYZSQPJKC-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"IYRMWMYZSQPJKC-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP007","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.71836,"median_top_score_kcal_mol":-10.71836,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-10.71836,-10.71622,-10.53939,-10.16539,-10.14796,-10.11204,-10.08724,-10.07597,-10.03805],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":21204,"role":"pose-ensemble-sdf","sha256":"32a5164eafea119178f5f6b82901fc0a38cf43c283ee52a1f431c52d7c8496d3","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-10.71836}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"f5f1db3ce59f9fe400abab583fba3d794b024844211a69356c407a57f87bdcbd","storage":"external-artifact-root"},{"bytes":2902,"role":"prepared-ligand-input","sha256":"f4a4b6706c0de4cf4363e778c7e5eaf4d4d21f63663797e4041bb813db4a0b14","storage":"external-artifact-root"},{"bytes":8450,"role":"execution-receipt","sha256":"82d73c60bf70058ef5bc5ab151d1e243f639fbb901f48016000794f5574b4a9a","storage":"external-artifact-root"},{"bytes":21203,"role":"pose-ensemble-sdf","sha256":"73ef9345feb616cb5b37881ea3888aaf40da20e5a21c0410b0a8ad8192242105","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"9557ce2cbc94e8cd13aa1b5608c9eb3dff2873ce21de28bb51e9b7eaf7a1253b","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.50828,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"flavonol","molecule_id":"NP008","molecule_input_sha256":"f4a4b6706c0de4cf4363e778c7e5eaf4d4d21f63663797e4041bb813db4a0b14","molecule_name":"Fisetin","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-02/NP008_seed41/NP008_seed41.sdf","pose_id":"NP008-seed41-mode1","pose_score":-10.50828,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2902,"role":"prepared-ligand-input","sha256":"f4a4b6706c0de4cf4363e778c7e5eaf4d4d21f63663797e4041bb813db4a0b14","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":173766546},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"XHEFDIBZLJXQHF-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"XHEFDIBZLJXQHF-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP008","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.50828,"median_top_score_kcal_mol":-10.50828,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-10.50828,-10.4534,-10.3935,-10.38463,-10.37826,-10.23866,-10.15226,-10.01833,-9.89845],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":21203,"role":"pose-ensemble-sdf","sha256":"73ef9345feb616cb5b37881ea3888aaf40da20e5a21c0410b0a8ad8192242105","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-10.50828}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"501d8c2786b9d06db8f7cdcba6352a00c802c5fcf5a548aee77f84eb9b8bc05e","storage":"external-artifact-root"},{"bytes":2812,"role":"prepared-ligand-input","sha256":"ba7c6d1657d80b71463975fe6fd489250f6d3974337c7357284c57482dd06a1a","storage":"external-artifact-root"},{"bytes":8439,"role":"execution-receipt","sha256":"1ee00cd40de48f46bf9c2e69b41c6c7b2ea378d485c073e3df21837ca14b64c9","storage":"external-artifact-root"},{"bytes":19596,"role":"pose-ensemble-sdf","sha256":"1b054c0ff523523cf368407a5c53d3dddc20074d4330c4db39465468a737feb3","storage":"external-artifact-root"},{"bytes":2523,"role":"smina-log","sha256":"32f045acbace308fba6ba138a38e3521fc40141122c41dc6d5591dff344ec2c3","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.34585,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"isoflavone","molecule_id":"NP009","molecule_input_sha256":"ba7c6d1657d80b71463975fe6fd489250f6d3974337c7357284c57482dd06a1a","molecule_name":"Genistein","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-03/NP009_seed41/NP009_seed41.sdf","pose_id":"NP009-seed41-mode1","pose_score":-10.34585,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2812,"role":"prepared-ligand-input","sha256":"ba7c6d1657d80b71463975fe6fd489250f6d3974337c7357284c57482dd06a1a","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":358774789},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"TZBJGXHYKVUXJN-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"TZBJGXHYKVUXJN-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP009","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.34585,"median_top_score_kcal_mol":-10.34585,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-10.34585,-10.27804,-10.00845,-9.9599,-9.95161,-9.88485,-9.86382,-9.68098,-9.67988],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":19596,"role":"pose-ensemble-sdf","sha256":"1b054c0ff523523cf368407a5c53d3dddc20074d4330c4db39465468a737feb3","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-10.34585}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"501d8c2786b9d06db8f7cdcba6352a00c802c5fcf5a548aee77f84eb9b8bc05e","storage":"external-artifact-root"},{"bytes":2983,"role":"prepared-ligand-input","sha256":"e2025f8b7facddd609fbee7af4543a3561b8225b45477cce2fbb2c7ec2b60f49","storage":"external-artifact-root"},{"bytes":8439,"role":"execution-receipt","sha256":"1ee00cd40de48f46bf9c2e69b41c6c7b2ea378d485c073e3df21837ca14b64c9","storage":"external-artifact-root"},{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"82b259c2564c8422dbc4cdd896d224fda8506c172e1ff116f63e0089e6f4a34a","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"813525b72cc48fef1b697282fa747903b4796f5bcba734af9246760df34ffd83","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.29808,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"flavanone","molecule_id":"NP010","molecule_input_sha256":"e2025f8b7facddd609fbee7af4543a3561b8225b45477cce2fbb2c7ec2b60f49","molecule_name":"(2S)-Naringenin","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-03/NP010_seed41/NP010_seed41.sdf","pose_id":"NP010-seed41-mode1","pose_score":-9.29808,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2983,"role":"prepared-ligand-input","sha256":"e2025f8b7facddd609fbee7af4543a3561b8225b45477cce2fbb2c7ec2b60f49","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1413268010},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"FTVWIRXFELQLPI-ZDUSSCGKSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"FTVWIRXFELQLPI-ZDUSSCGKSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP010","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.29808,"median_top_score_kcal_mol":-9.29808,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-9.29808,-9.00404,-8.86822,-8.85885,-8.8479,-8.60091,-8.39928,-8.37136,-8.34248],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"82b259c2564c8422dbc4cdd896d224fda8506c172e1ff116f63e0089e6f4a34a","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-9.29808}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"501d8c2786b9d06db8f7cdcba6352a00c802c5fcf5a548aee77f84eb9b8bc05e","storage":"external-artifact-root"},{"bytes":4609,"role":"prepared-ligand-input","sha256":"6ea07cca7a903999ef7ecb4fd063f462e76864b1a521e8264b473d976de2324e","storage":"external-artifact-root"},{"bytes":8439,"role":"execution-receipt","sha256":"1ee00cd40de48f46bf9c2e69b41c6c7b2ea378d485c073e3df21837ca14b64c9","storage":"external-artifact-root"},{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"fb3ec91ebc98984a9a246a6fd4444d87a4d735618bbc8885ce8921897d66b332","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"32d984e42d89f36974630e7e9b2854d4841af898a49a098d568e1517dfeb706e","storage":"external-artifact-root"},{"bytes":2084,"role":"request-spec","sha256":"1904de824ee6c79b1a2f90c84efbe4b65b82ea25574b6b70be6b99ff330ab9ef","storage":"external-artifact-root"},{"bytes":6555,"role":"execution-receipt","sha256":"8b4cf2314fdb678294096f844eddb68dff2c1a5b77054f44fb4fe15c6e219ce3","storage":"external-artifact-root"},{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"c960a437ff8350495a89c00272e1cf65471e647898392b0282f5a83518fc2610","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"3c1d60b920c37763e99cd7b88f440952340446c4509f8e776a2e1dcd72a087d5","storage":"external-artifact-root"},{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"5487a3d3c9760ef5b61725cd389b29d0b74eecb3dcf812828f63a462fe5a98c7","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"b756738ded360652df6ee56750a5e9be33ed7deee07725dbf85ae0bd1101eb3c","storage":"external-artifact-root"},{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"acb455f039b483bc8ccd5ab86a356c583e05a4b983a0b49f946f31db61dedf6e","storage":"external-artifact-root"},{"bytes":2526,"role":"smina-log","sha256":"8ae19b647381ceff27c776f9fa42093de167aca34a0e1a3daa3f8286257872f9","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-12.20589,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":{"evidence_class":"computational-screening-hypothesis","interpretation":"Passing supports repeatable pose scoring and site occupancy under this one Smina/Vinardo protocol. It does not establish binding, affinity, selectivity, target inhibition, exposure, or therapeutic effect.","overall_gate_pass":true,"pose_geometry":{"all_top_poses_contact_declared_site":true,"all_top_poses_inside_declared_box":true,"all_top_poses_no_severe_clashes":true,"contact_persistence_gate_pass":true,"contacted_site_residue_union":["B:ASN186","B:ASN390","B:ASN499","B:ASP524","B:GLY393","B:GLY419","B:HIS118","B:ILE394","B:LEU184","B:LEU389","B:LEU415","B:PHE417","B:PHE500","B:PRO182","B:PRO416","B:PRO498","B:SER185"],"contacted_site_residues_in_every_seed":["B:ASN186","B:ASN390","B:ASN499","B:ASP524","B:GLY393","B:GLY419","B:HIS118","B:ILE394","B:LEU184","B:LEU389","B:LEU415","B:PHE417","B:PHE500","B:PRO182","B:PRO416","B:PRO498","B:SER185"],"geometry_gate_pass":true,"mean_pairwise_contact_jaccard":1.0,"minimum_pairwise_contact_jaccard":1.0,"per_seed":[{"contacted_site_residue_count":17,"contacted_site_residues":["B:ASN186","B:ASN390","B:ASN499","B:ASP524","B:GLY393","B:GLY419","B:HIS118","B:ILE394","B:LEU184","B:LEU389","B:LEU415","B:PHE417","B:PHE500","B:PRO182","B:PRO416","B:PRO498","B:SER185"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"c960a437ff8350495a89c00272e1cf65471e647898392b0282f5a83518fc2610","storage":"external-artifact-root"},"seed":11,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-12.2002},{"contacted_site_residue_count":17,"contacted_site_residues":["B:ASN186","B:ASN390","B:ASN499","B:ASP524","B:GLY393","B:GLY419","B:HIS118","B:ILE394","B:LEU184","B:LEU389","B:LEU415","B:PHE417","B:PHE500","B:PRO182","B:PRO416","B:PRO498","B:SER185"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"5487a3d3c9760ef5b61725cd389b29d0b74eecb3dcf812828f63a462fe5a98c7","storage":"external-artifact-root"},"seed":29,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-12.20394},{"contacted_site_residue_count":17,"contacted_site_residues":["B:ASN186","B:ASN390","B:ASN499","B:ASP524","B:GLY393","B:GLY419","B:HIS118","B:ILE394","B:LEU184","B:LEU389","B:LEU415","B:PHE417","B:PHE500","B:PRO182","B:PRO416","B:PRO498","B:SER185"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"acb455f039b483bc8ccd5ab86a356c583e05a4b983a0b49f946f31db61dedf6e","storage":"external-artifact-root"},"seed":47,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-12.19857}],"persistent_site_residue_count":17},"requested_seed_count":3,"score_repeatability":{"maximum_span_kcal_mol":1.0,"pass":true,"top_score_span_kcal_mol":0.00537},"state":"same-protocol-confirmation-passed","successful_seed_count":3},"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"catechin","molecule_id":"NP011","molecule_input_sha256":"6ea07cca7a903999ef7ecb4fd063f462e76864b1a521e8264b473d976de2324e","molecule_name":"(−)-Epigallocatechin-3-gallate","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-03/NP011_seed41/NP011_seed41.sdf","pose_id":"NP011-seed41-mode1","pose_score":-12.20589,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":4609,"role":"prepared-ligand-input","sha256":"6ea07cca7a903999ef7ecb4fd063f462e76864b1a521e8264b473d976de2324e","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1069245383},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"WMBWREPUVVBILR-WIYYLYMNSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"WMBWREPUVVBILR-WIYYLYMNSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP011","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-12.200903333333335,"median_top_score_kcal_mol":-12.2002,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.0027532223545021937,"top_score_span_kcal_mol":0.005369999999999209},"seed_observations":[{"affinities_kcal_mol":[-12.20589,-12.0673,-11.79439,-11.66515,-11.56766,-11.45395,-11.12647,-11.01528,-10.97863],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"fb3ec91ebc98984a9a246a6fd4444d87a4d735618bbc8885ce8921897d66b332","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-12.20589},{"affinities_kcal_mol":[-12.2002,-12.11774,-12.06872,-11.80138,-11.57734,-11.46514,-11.12526,-11.00485,-10.98369],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"c960a437ff8350495a89c00272e1cf65471e647898392b0282f5a83518fc2610","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":11,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-12.2002},{"affinities_kcal_mol":[-12.20394,-12.15288,-12.08157,-11.81502,-11.59039,-11.44761,-11.15666,-11.14078,-11.11919],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"5487a3d3c9760ef5b61725cd389b29d0b74eecb3dcf812828f63a462fe5a98c7","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":29,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-12.20394},{"affinities_kcal_mol":[-12.19857,-12.13573,-12.07186,-12.06275,-11.80922,-11.56688,-11.52301,-11.22668,-11.12207],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":34191,"role":"pose-ensemble-sdf","sha256":"acb455f039b483bc8ccd5ab86a356c583e05a4b983a0b49f946f31db61dedf6e","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":47,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-12.19857}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"501d8c2786b9d06db8f7cdcba6352a00c802c5fcf5a548aee77f84eb9b8bc05e","storage":"external-artifact-root"},{"bytes":2669,"role":"prepared-ligand-input","sha256":"7cd81e858e53d83a50316cc2ed8ad5a30243531b50b18c6219bf03ac64806bea","storage":"external-artifact-root"},{"bytes":8439,"role":"execution-receipt","sha256":"1ee00cd40de48f46bf9c2e69b41c6c7b2ea378d485c073e3df21837ca14b64c9","storage":"external-artifact-root"},{"bytes":22175,"role":"pose-ensemble-sdf","sha256":"85764a37e769f0059e086faf6b7664b557c903b1686237d13959c9da7fe5c1ba","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"d7f625eb706b8b636a41fbe7ebcbbbfd291cca929fd2e6954c7c04ad91ddfade","storage":"external-artifact-root"},{"bytes":2084,"role":"request-spec","sha256":"1a3d642c047776a129970f87be7c7e26d60eedff326524429b482e3f2f24cd40","storage":"external-artifact-root"},{"bytes":6547,"role":"execution-receipt","sha256":"39ac9d6514e05fc248ca13206b12ec9251ee6f24df7aa186f1331f6bde23f538","storage":"external-artifact-root"},{"bytes":22175,"role":"pose-ensemble-sdf","sha256":"7a14359e86b72258b835589acc31234b7b9327c6435d7c4ec91bcef91440e148","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"22ae877c4b53eb1a495c191f51302c901ca6982a678230852511e02154f0b216","storage":"external-artifact-root"},{"bytes":22175,"role":"pose-ensemble-sdf","sha256":"35aa28a90b88acc086887939df65ae76d089ae2eb2f4e3bd8042cfc2930ce42b","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"98238e337f96ced2733aff4d49a00939cca375e731125d8a141cc5281c1fc883","storage":"external-artifact-root"},{"bytes":22175,"role":"pose-ensemble-sdf","sha256":"eb54bde916fe9933acf50f9d7f6799417fdcbe9bba28dd7bdc897ae0f95ec85d","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"c0666a1790edc0e60b7c7654694d59c184ed32b4b1b00274c836baea65b892e8","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.80744,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":{"evidence_class":"computational-screening-hypothesis","interpretation":"Passing supports repeatable pose scoring and site occupancy under this one Smina/Vinardo protocol. It does not establish binding, affinity, selectivity, target inhibition, exposure, or therapeutic effect.","overall_gate_pass":true,"pose_geometry":{"all_top_poses_contact_declared_site":true,"all_top_poses_inside_declared_box":true,"all_top_poses_no_severe_clashes":true,"contact_persistence_gate_pass":true,"contacted_site_residue_union":["B:ASN186","B:ASN390","B:ASN499","B:ASP121","B:GLY393","B:GLY418","B:GLY419","B:HIS118","B:LEU184","B:PHE417","B:PHE500","B:PRO498","B:SER185"],"contacted_site_residues_in_every_seed":["B:ASN186","B:ASN390","B:ASN499","B:ASP121","B:GLY393","B:GLY418","B:GLY419","B:HIS118","B:LEU184","B:PHE417","B:PHE500","B:PRO498","B:SER185"],"geometry_gate_pass":true,"mean_pairwise_contact_jaccard":1.0,"minimum_pairwise_contact_jaccard":1.0,"per_seed":[{"contacted_site_residue_count":13,"contacted_site_residues":["B:ASN186","B:ASN390","B:ASN499","B:ASP121","B:GLY393","B:GLY418","B:GLY419","B:HIS118","B:LEU184","B:PHE417","B:PHE500","B:PRO498","B:SER185"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":22175,"role":"pose-ensemble-sdf","sha256":"7a14359e86b72258b835589acc31234b7b9327c6435d7c4ec91bcef91440e148","storage":"external-artifact-root"},"seed":11,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.80692},{"contacted_site_residue_count":13,"contacted_site_residues":["B:ASN186","B:ASN390","B:ASN499","B:ASP121","B:GLY393","B:GLY418","B:GLY419","B:HIS118","B:LEU184","B:PHE417","B:PHE500","B:PRO498","B:SER185"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":22175,"role":"pose-ensemble-sdf","sha256":"35aa28a90b88acc086887939df65ae76d089ae2eb2f4e3bd8042cfc2930ce42b","storage":"external-artifact-root"},"seed":29,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.80744},{"contacted_site_residue_count":13,"contacted_site_residues":["B:ASN186","B:ASN390","B:ASN499","B:ASP121","B:GLY393","B:GLY418","B:GLY419","B:HIS118","B:LEU184","B:PHE417","B:PHE500","B:PRO498","B:SER185"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":22175,"role":"pose-ensemble-sdf","sha256":"eb54bde916fe9933acf50f9d7f6799417fdcbe9bba28dd7bdc897ae0f95ec85d","storage":"external-artifact-root"},"seed":47,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.80589}],"persistent_site_residue_count":13},"requested_seed_count":3,"score_repeatability":{"maximum_span_kcal_mol":1.0,"pass":true,"top_score_span_kcal_mol":0.00155},"state":"same-protocol-confirmation-passed","successful_seed_count":3},"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"polyphenol","molecule_id":"NP012","molecule_input_sha256":"7cd81e858e53d83a50316cc2ed8ad5a30243531b50b18c6219bf03ac64806bea","molecule_name":"Ellagic acid","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/promoted-set-replicate-docking/np012/NP012_seed29/NP012_seed29.sdf","pose_id":"NP012-seed29-mode1","pose_score":-10.80744,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2669,"role":"prepared-ligand-input","sha256":"7cd81e858e53d83a50316cc2ed8ad5a30243531b50b18c6219bf03ac64806bea","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":430940940},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"AFSDNFLWKVMVRB-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"AFSDNFLWKVMVRB-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP012","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.80675,"median_top_score_kcal_mol":-10.80692,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.0007888599368709084,"top_score_span_kcal_mol":0.0015499999999999403},"seed_observations":[{"affinities_kcal_mol":[-10.80544,-10.79761,-10.64676,-10.58799,-10.22793,-10.21486,-10.11869,-10.08197,-9.6797],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":22175,"role":"pose-ensemble-sdf","sha256":"85764a37e769f0059e086faf6b7664b557c903b1686237d13959c9da7fe5c1ba","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-10.80544},{"affinities_kcal_mol":[-10.80692,-10.79078,-10.6601,-10.64169,-10.22753,-10.21933,-10.11977,-10.08542,-9.68075],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":22175,"role":"pose-ensemble-sdf","sha256":"7a14359e86b72258b835589acc31234b7b9327c6435d7c4ec91bcef91440e148","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":11,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.80692},{"affinities_kcal_mol":[-10.80744,-10.79516,-10.64135,-10.59174,-10.2295,-10.22708,-10.10906,-10.08571,-9.68111],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":22175,"role":"pose-ensemble-sdf","sha256":"35aa28a90b88acc086887939df65ae76d089ae2eb2f4e3bd8042cfc2930ce42b","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":29,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.80744},{"affinities_kcal_mol":[-10.80589,-10.79328,-10.65332,-10.58891,-10.22817,-10.22583,-10.12769,-10.0854,-9.67829],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":22175,"role":"pose-ensemble-sdf","sha256":"eb54bde916fe9933acf50f9d7f6799417fdcbe9bba28dd7bdc897ae0f95ec85d","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":47,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.80589}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"6ad4a86d9cb96b03831656583134dc87cea93fc02f6a153e771a9c2fe3f365a0","storage":"external-artifact-root"},{"bytes":3947,"role":"prepared-ligand-input","sha256":"a325bfd6a1bfc822c8613bbcad7a94425f45be16b17a324ca171d76147b2fd06","storage":"external-artifact-root"},{"bytes":8392,"role":"execution-receipt","sha256":"e0e4a026a65a5da91158b2809e0bdb0adc4925e0b1b2dbcfabb15a4677b78804","storage":"external-artifact-root"},{"bytes":16872,"role":"pose-ensemble-sdf","sha256":"f7aa92453a2582e5c96797e51c6e118a3ba6bc879eb59e81794816849d49265f","storage":"external-artifact-root"},{"bytes":2364,"role":"smina-log","sha256":"c42ec788c85438f870c3ce1a9c613b583a855f8fdfc25cae44b37e22235dfd9b","storage":"external-artifact-root"},{"bytes":2084,"role":"request-spec","sha256":"13337a043d825174f5a0816bd724c787e8d58dc6c724cb8a41491064cb8139cc","storage":"external-artifact-root"},{"bytes":6409,"role":"execution-receipt","sha256":"1df6eff1416d39ecba12a3e51ed9ba73ff02ee73f7cf494377ceb88776151aa6","storage":"external-artifact-root"},{"bytes":16872,"role":"pose-ensemble-sdf","sha256":"0c9280c2922291456551c8ea335fd0d1b9c41223231a805ab52b6abe34083585","storage":"external-artifact-root"},{"bytes":2364,"role":"smina-log","sha256":"22548a0f52361ceb75e7071f9f653d3e37f062eb65594b34944607c775f73d07","storage":"external-artifact-root"},{"bytes":16872,"role":"pose-ensemble-sdf","sha256":"91cd23e1272dee41e9423e3f6efd9a07ad84a35e786bc1112a30669a463cd93b","storage":"external-artifact-root"},{"bytes":2364,"role":"smina-log","sha256":"dca422f038c0eaa42dcd30cf703137b14083975f65bcb87784dd4cb5510ddf2c","storage":"external-artifact-root"},{"bytes":16872,"role":"pose-ensemble-sdf","sha256":"2432738577dec623a37240a76d4b604c0ddd7b84147bc550d73338a6053ec2e4","storage":"external-artifact-root"},{"bytes":2364,"role":"smina-log","sha256":"43024a8b00383a774b2cb6640cd05cbbf03d100b6f94a4bf751d3422270993e5","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.8724,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":{"evidence_class":"computational-screening-hypothesis","interpretation":"Passing supports repeatable pose scoring and site occupancy under this one Smina/Vinardo protocol. It does not establish binding, affinity, selectivity, target inhibition, exposure, or therapeutic effect.","overall_gate_pass":true,"pose_geometry":{"all_top_poses_contact_declared_site":true,"all_top_poses_inside_declared_box":true,"all_top_poses_no_severe_clashes":true,"contact_persistence_gate_pass":true,"contacted_site_residue_union":["B:ARG354","B:ARG395","B:ASN117","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:GLY447","B:HIS118","B:LEU184","B:PHE417","B:PHE421","B:PHE500","B:PRO498","B:THR420"],"contacted_site_residues_in_every_seed":["B:ARG354","B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:GLY447","B:HIS118","B:LEU184","B:PHE417","B:PHE421","B:PHE500","B:PRO498","B:THR420"],"geometry_gate_pass":true,"mean_pairwise_contact_jaccard":0.962963,"minimum_pairwise_contact_jaccard":0.944444,"per_seed":[{"contacted_site_residue_count":18,"contacted_site_residues":["B:ARG354","B:ARG395","B:ASN117","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:GLY447","B:HIS118","B:LEU184","B:PHE417","B:PHE421","B:PHE500","B:PRO498","B:THR420"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":16872,"role":"pose-ensemble-sdf","sha256":"0c9280c2922291456551c8ea335fd0d1b9c41223231a805ab52b6abe34083585","storage":"external-artifact-root"},"seed":11,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.8724},{"contacted_site_residue_count":17,"contacted_site_residues":["B:ARG354","B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:GLY447","B:HIS118","B:LEU184","B:PHE417","B:PHE421","B:PHE500","B:PRO498","B:THR420"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":16872,"role":"pose-ensemble-sdf","sha256":"91cd23e1272dee41e9423e3f6efd9a07ad84a35e786bc1112a30669a463cd93b","storage":"external-artifact-root"},"seed":29,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.86762},{"contacted_site_residue_count":18,"contacted_site_residues":["B:ARG354","B:ARG395","B:ASN117","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:GLY447","B:HIS118","B:LEU184","B:PHE417","B:PHE421","B:PHE500","B:PRO498","B:THR420"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":16872,"role":"pose-ensemble-sdf","sha256":"2432738577dec623a37240a76d4b604c0ddd7b84147bc550d73338a6053ec2e4","storage":"external-artifact-root"},"seed":47,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-10.8667}],"persistent_site_residue_count":17},"requested_seed_count":3,"score_repeatability":{"maximum_span_kcal_mol":1.0,"pass":true,"top_score_span_kcal_mol":0.0057},"state":"same-protocol-confirmation-passed","successful_seed_count":3},"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"isoquinoline-alkaloid","molecule_id":"NP013","molecule_input_sha256":"a325bfd6a1bfc822c8613bbcad7a94425f45be16b17a324ca171d76147b2fd06","molecule_name":"Berberine cation","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/promoted-set-replicate-docking/np013/NP013_seed11/NP013_seed11.sdf","pose_id":"NP013-seed11-mode1","pose_score":-10.8724,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3947,"role":"prepared-ligand-input","sha256":"a325bfd6a1bfc822c8613bbcad7a94425f45be16b17a324ca171d76147b2fd06","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1679074209},"formal_charge":1,"identity_relation":"prepared form matches parent InChIKey","inchikey":"YBHILYKTIRIUTE-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"YBHILYKTIRIUTE-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP013","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.868906666666668,"median_top_score_kcal_mol":-10.86762,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.003060087144728998,"top_score_span_kcal_mol":0.0057000000000009265},"seed_observations":[{"affinities_kcal_mol":[-10.86481,-10.58248,-9.307,-9.27157,-8.86486,-8.72782,-8.71456],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":16872,"role":"pose-ensemble-sdf","sha256":"f7aa92453a2582e5c96797e51c6e118a3ba6bc879eb59e81794816849d49265f","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-10.86481},{"affinities_kcal_mol":[-10.8724,-10.55317,-9.27678,-9.25242,-8.86588,-8.80258,-8.70415],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":16872,"role":"pose-ensemble-sdf","sha256":"0c9280c2922291456551c8ea335fd0d1b9c41223231a805ab52b6abe34083585","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":11,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.8724},{"affinities_kcal_mol":[-10.86762,-10.57373,-9.27785,-9.25106,-8.87105,-8.81936,-8.72626],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":16872,"role":"pose-ensemble-sdf","sha256":"91cd23e1272dee41e9423e3f6efd9a07ad84a35e786bc1112a30669a463cd93b","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":29,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.86762},{"affinities_kcal_mol":[-10.8667,-10.55803,-9.28052,-9.2465,-8.86089,-8.80964,-8.5564],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":16872,"role":"pose-ensemble-sdf","sha256":"2432738577dec623a37240a76d4b604c0ddd7b84147bc550d73338a6053ec2e4","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":47,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-10.8667}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"6ad4a86d9cb96b03831656583134dc87cea93fc02f6a153e771a9c2fe3f365a0","storage":"external-artifact-root"},{"bytes":2816,"role":"prepared-ligand-input","sha256":"3b3a64f7e72ea3e0aecdd4443ea0d378d09645bcdb1682d3f42e45e9c9756d60","storage":"external-artifact-root"},{"bytes":8392,"role":"execution-receipt","sha256":"e0e4a026a65a5da91158b2809e0bdb0adc4925e0b1b2dbcfabb15a4677b78804","storage":"external-artifact-root"},{"bytes":19596,"role":"pose-ensemble-sdf","sha256":"305f7482b7d15c01ccb1e486876ae207c39ed74d818fb7ea50d1a63e26395514","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"9d4f8ef15ca79ccba86b675e045d4c01b891201e8b355094b8cdcd4b271d7f42","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-10.28947,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"flavone","molecule_id":"NP014","molecule_input_sha256":"3b3a64f7e72ea3e0aecdd4443ea0d378d09645bcdb1682d3f42e45e9c9756d60","molecule_name":"Baicalein","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-04/NP014_seed41/NP014_seed41.sdf","pose_id":"NP014-seed41-mode1","pose_score":-10.28947,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2816,"role":"prepared-ligand-input","sha256":"3b3a64f7e72ea3e0aecdd4443ea0d378d09645bcdb1682d3f42e45e9c9756d60","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1022975310},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"FXNFHKRTJBSTCS-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"FXNFHKRTJBSTCS-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP014","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-10.28947,"median_top_score_kcal_mol":-10.28947,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-10.28947,-10.23774,-10.23318,-9.95455,-9.89832,-9.84887,-9.76715,-9.71051,-9.66511],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":19596,"role":"pose-ensemble-sdf","sha256":"305f7482b7d15c01ccb1e486876ae207c39ed74d818fb7ea50d1a63e26395514","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-10.28947}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"6ad4a86d9cb96b03831656583134dc87cea93fc02f6a153e771a9c2fe3f365a0","storage":"external-artifact-root"},{"bytes":3463,"role":"prepared-ligand-input","sha256":"57fd5758d716504b213c8395fe78cc39b9eddf9187b41fcd4a1fa9a5a7cc8677","storage":"external-artifact-root"},{"bytes":8392,"role":"execution-receipt","sha256":"e0e4a026a65a5da91158b2809e0bdb0adc4925e0b1b2dbcfabb15a4677b78804","storage":"external-artifact-root"},{"bytes":18630,"role":"pose-ensemble-sdf","sha256":"10d3eac54f5ef45ec4fd5b52256ec0d766398bfbd249c4e40634f890ee088660","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"92e524bbd3743eb15f05fc779e56fee96855ad38cd3a4a0c5703c61be3b866e9","storage":"external-artifact-root"},{"bytes":2084,"role":"request-spec","sha256":"c47266f5a7f9069b2a5de354824472962364b551c47ef65b9c3af9d680cec194","storage":"external-artifact-root"},{"bytes":6552,"role":"execution-receipt","sha256":"b6b367e1b456011b347435de04ccb88df404c769b603f79c5ac2562f85fb879c","storage":"external-artifact-root"},{"bytes":18630,"role":"pose-ensemble-sdf","sha256":"60e026e42a61331c75363d9816dbbfaa76ebc1bb5b1ed282bd152233cd27a5ad","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"95ef086617f3cf6587ce075524db10def5d8ebf5227f8fabee9b2328b9f7fbc6","storage":"external-artifact-root"},{"bytes":18630,"role":"pose-ensemble-sdf","sha256":"3c309112ff5e6d4a6d33c55e15b57b40c0debc534f3d7f723e56e57675338589","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"0a31971c5a33657ac05e2e9b4c9334d80589d6a4c14a001f7e01f5014ddfaf5d","storage":"external-artifact-root"},{"bytes":18630,"role":"pose-ensemble-sdf","sha256":"704cbf291b8895e5a0e40cc2075e06aacbf08bae8ce4691f90d7cf228cc55658","storage":"external-artifact-root"},{"bytes":2525,"role":"smina-log","sha256":"d01b8caf93c62f9304aa4c38123dd39b110993ee78f42c1e819e2b0eb786e900","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-11.16153,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":{"evidence_class":"computational-screening-hypothesis","interpretation":"Passing supports repeatable pose scoring and site occupancy under this one Smina/Vinardo protocol. It does not establish binding, affinity, selectivity, target inhibition, exposure, or therapeutic effect.","overall_gate_pass":true,"pose_geometry":{"all_top_poses_contact_declared_site":true,"all_top_poses_inside_declared_box":true,"all_top_poses_no_severe_clashes":true,"contact_persistence_gate_pass":true,"contacted_site_residue_union":["B:ARG354","B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:GLY447","B:HIS118","B:LEU184","B:LEU415","B:PHE417","B:PHE421","B:PHE500","B:PRO498"],"contacted_site_residues_in_every_seed":["B:ARG354","B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:GLY447","B:HIS118","B:LEU184","B:LEU415","B:PHE417","B:PHE421","B:PHE500","B:PRO498"],"geometry_gate_pass":true,"mean_pairwise_contact_jaccard":1.0,"minimum_pairwise_contact_jaccard":1.0,"per_seed":[{"contacted_site_residue_count":17,"contacted_site_residues":["B:ARG354","B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:GLY447","B:HIS118","B:LEU184","B:LEU415","B:PHE417","B:PHE421","B:PHE500","B:PRO498"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":18630,"role":"pose-ensemble-sdf","sha256":"60e026e42a61331c75363d9816dbbfaa76ebc1bb5b1ed282bd152233cd27a5ad","storage":"external-artifact-root"},"seed":11,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-11.13207},{"contacted_site_residue_count":17,"contacted_site_residues":["B:ARG354","B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:GLY447","B:HIS118","B:LEU184","B:LEU415","B:PHE417","B:PHE421","B:PHE500","B:PRO498"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":18630,"role":"pose-ensemble-sdf","sha256":"3c309112ff5e6d4a6d33c55e15b57b40c0debc534f3d7f723e56e57675338589","storage":"external-artifact-root"},"seed":29,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-11.16153},{"contacted_site_residue_count":17,"contacted_site_residues":["B:ARG354","B:ARG395","B:ASN390","B:ASN499","B:ASP506","B:ASP524","B:GLY392","B:GLY393","B:GLY419","B:GLY447","B:HIS118","B:LEU184","B:LEU415","B:PHE417","B:PHE421","B:PHE500","B:PRO498"],"execution_state":"completed","geometry_gate_pass":true,"pose_artifact":{"bytes":18630,"role":"pose-ensemble-sdf","sha256":"704cbf291b8895e5a0e40cc2075e06aacbf08bae8ce4691f90d7cf228cc55658","storage":"external-artifact-root"},"seed":47,"severe_clash_count":0,"severe_clash_distance_angstrom":1.5,"site_contact_distance_angstrom":4.5,"top_pose_inside_declared_box":true,"top_vinardo_score_kcal_mol":-11.11729}],"persistent_site_residue_count":17},"requested_seed_count":3,"score_repeatability":{"maximum_span_kcal_mol":1.0,"pass":true,"top_score_span_kcal_mol":0.04424},"state":"same-protocol-confirmation-passed","successful_seed_count":3},"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"neolignan","molecule_id":"NP015","molecule_input_sha256":"57fd5758d716504b213c8395fe78cc39b9eddf9187b41fcd4a1fa9a5a7cc8677","molecule_name":"Honokiol","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/promoted-set-replicate-docking/np015/NP015_seed29/NP015_seed29.sdf","pose_id":"NP015-seed29-mode1","pose_score":-11.16153,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":4,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3463,"role":"prepared-ligand-input","sha256":"57fd5758d716504b213c8395fe78cc39b9eddf9187b41fcd4a1fa9a5a7cc8677","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":288226735},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"FVYXIJYOAGAUQK-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"FVYXIJYOAGAUQK-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP015","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-11.136963333333334,"median_top_score_kcal_mol":-11.13207,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","seeds":[11,29,47],"state":"concordant","successful_comparable_seed_count":3,"top_score_sample_standard_deviation_kcal_mol":0.022522276379916398,"top_score_span_kcal_mol":0.04424000000000028},"seed_observations":[{"affinities_kcal_mol":[-11.12783,-10.73038,-10.6018,-10.55068,-10.54271,-10.46278,-10.44628,-10.35828,-10.33518],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":18630,"role":"pose-ensemble-sdf","sha256":"10d3eac54f5ef45ec4fd5b52256ec0d766398bfbd249c4e40634f890ee088660","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-11.12783},{"affinities_kcal_mol":[-11.13207,-10.74882,-10.70326,-10.58873,-10.58037,-10.5592,-10.47471,-10.46243,-10.3482],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":18630,"role":"pose-ensemble-sdf","sha256":"60e026e42a61331c75363d9816dbbfaa76ebc1bb5b1ed282bd152233cd27a5ad","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":11,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-11.13207},{"affinities_kcal_mol":[-11.16153,-10.77658,-10.67931,-10.61585,-10.59466,-10.57473,-10.49291,-10.48698,-10.47738],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":18630,"role":"pose-ensemble-sdf","sha256":"3c309112ff5e6d4a6d33c55e15b57b40c0debc534f3d7f723e56e57675338589","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":29,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-11.16153},{"affinities_kcal_mol":[-11.11729,-10.72639,-10.67503,-10.57026,-10.54955,-10.54464,-10.48057,-10.46999,-10.46143],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":64,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":18630,"role":"pose-ensemble-sdf","sha256":"704cbf291b8895e5a0e40cc2075e06aacbf08bae8ce4691f90d7cf228cc55658","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":64,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"promoted-set-replicate-docking\"}","returncode":0,"seed":47,"stage_id":"promoted-set-replicate-docking","top_vinardo_score_kcal_mol":-11.11729}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":4,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"6ad4a86d9cb96b03831656583134dc87cea93fc02f6a153e771a9c2fe3f365a0","storage":"external-artifact-root"},{"bytes":2816,"role":"prepared-ligand-input","sha256":"d6d1d370cdd84a60a250be917c8d1f1dc56cd08aab235dd886b63d02ef78fc09","storage":"external-artifact-root"},{"bytes":8392,"role":"execution-receipt","sha256":"e0e4a026a65a5da91158b2809e0bdb0adc4925e0b1b2dbcfabb15a4677b78804","storage":"external-artifact-root"},{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"f05c29676c7ee801a1f6463886d616190474c0834c106ede07c692be9f9662eb","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"0123084940a1b8ffd5da1cd2afa4c1105392d461e86ad395c0a29884ba684fd1","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-9.50505,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"anthraquinone","molecule_id":"NP016","molecule_input_sha256":"d6d1d370cdd84a60a250be917c8d1f1dc56cd08aab235dd886b63d02ef78fc09","molecule_name":"Emodin","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-04/NP016_seed41/NP016_seed41.sdf","pose_id":"NP016-seed41-mode1","pose_score":-9.50505,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2816,"role":"prepared-ligand-input","sha256":"d6d1d370cdd84a60a250be917c8d1f1dc56cd08aab235dd886b63d02ef78fc09","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1996562336},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"RHMXXJGYXNZAPX-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"RHMXXJGYXNZAPX-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP016","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-9.50505,"median_top_score_kcal_mol":-9.50505,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-9.50505,-9.46366,-9.29608,-9.03383,-9.00904,-8.95242,-8.8495,-8.77718,-8.69527],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":19593,"role":"pose-ensemble-sdf","sha256":"f05c29676c7ee801a1f6463886d616190474c0834c106ede07c692be9f9662eb","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-9.50505}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"dcf6635fa8939bcb519ccb178c55f86fec2b4ce62816bdf9f77cb36850a03f3f","storage":"external-artifact-root"},{"bytes":2272,"role":"prepared-ligand-input","sha256":"55bd0689342343a9de42d20609bd76d3d710c80393577f07cd0d1d587e341577","storage":"external-artifact-root"},{"bytes":8147,"role":"execution-receipt","sha256":"a072b56c88c015b93f43115762abaf087596be98c27cca09c05ef3af70463b54","storage":"external-artifact-root"},{"bytes":10440,"role":"pose-ensemble-sdf","sha256":"742838e3d5efeacaf985f8021cfacd3e71dd399bcba0cedd4e56cff0d9ffb81d","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"95797934019eed2557d66aaf1f0f41d17e542b6df49091b86fa9595f72ab5f29","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-6.33081,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"quinone","molecule_id":"NP017","molecule_input_sha256":"55bd0689342343a9de42d20609bd76d3d710c80393577f07cd0d1d587e341577","molecule_name":"Thymoquinone","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-05/NP017_seed41/NP017_seed41.sdf","pose_id":"NP017-seed41-mode1","pose_score":-6.33081,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2272,"role":"prepared-ligand-input","sha256":"55bd0689342343a9de42d20609bd76d3d710c80393577f07cd0d1d587e341577","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":933691933},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"KEQHJBNSCLWCAE-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"KEQHJBNSCLWCAE-UHFFFAOYSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP017","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-6.33081,"median_top_score_kcal_mol":-6.33081,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-6.33081,-6.05232,-5.88886,-5.79916,-5.7805,-5.69838,-5.68358,-5.55854,-5.43983],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":10440,"role":"pose-ensemble-sdf","sha256":"742838e3d5efeacaf985f8021cfacd3e71dd399bcba0cedd4e56cff0d9ffb81d","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-6.33081}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"dcf6635fa8939bcb519ccb178c55f86fec2b4ce62816bdf9f77cb36850a03f3f","storage":"external-artifact-root"},{"bytes":2001,"role":"prepared-ligand-input","sha256":"6a08ae960eb8604457a59eda35a66e8f58a4b05d592e58123dbef4c4125eb092","storage":"external-artifact-root"},{"bytes":8147,"role":"execution-receipt","sha256":"a072b56c88c015b93f43115762abaf087596be98c27cca09c05ef3af70463b54","storage":"external-artifact-root"},{"bytes":8667,"role":"pose-ensemble-sdf","sha256":"1f2576dab806680773207ea2732ce7e3f207afc69dd992f7eb4f764d4e119444","storage":"external-artifact-root"},{"bytes":2523,"role":"smina-log","sha256":"217b8611b77d56cd48f561809b669a28a7006218f2ce5f95662384db2f29cc1c","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-4.5454,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"isothiocyanate","molecule_id":"NP018","molecule_input_sha256":"6a08ae960eb8604457a59eda35a66e8f58a4b05d592e58123dbef4c4125eb092","molecule_name":"Sulforaphane (stereochemistry unspecified)","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-05/NP018_seed41/NP018_seed41.sdf","pose_id":"NP018-seed41-mode1","pose_score":-4.5454,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":2001,"role":"prepared-ligand-input","sha256":"6a08ae960eb8604457a59eda35a66e8f58a4b05d592e58123dbef4c4125eb092","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":991510760},"formal_charge":0,"identity_relation":"3D geometry instantiates a source-unspecified stereocenter; parent identity remains the source InChIKey","inchikey":"SUVMJBTUFCVSAD-UHFFFAOYSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"SUVMJBTUFCVSAD-SNVBAGLBSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":["1"]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP018","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-4.5454,"median_top_score_kcal_mol":-4.5454,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-4.5454,-4.38984,-4.31773,-4.21456,-4.09664,-4.07038,-4.0632,-4.06249,-4.05113],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":8667,"role":"pose-ensemble-sdf","sha256":"1f2576dab806680773207ea2732ce7e3f207afc69dd992f7eb4f764d4e119444","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-4.5454}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"dcf6635fa8939bcb519ccb178c55f86fec2b4ce62816bdf9f77cb36850a03f3f","storage":"external-artifact-root"},{"bytes":7135,"role":"prepared-ligand-input","sha256":"2447304dc45cd1ac1acac75c8211d68db3272417b4e1fbb066f2c72017eb9a57","storage":"external-artifact-root"},{"bytes":8147,"role":"execution-receipt","sha256":"a072b56c88c015b93f43115762abaf087596be98c27cca09c05ef3af70463b54","storage":"external-artifact-root"},{"bytes":6564,"role":"pose-ensemble-sdf","sha256":"8250065632e2d4875f7aedba58cdf15c8b1b409cb66353e31c857775fa53f8f0","storage":"external-artifact-root"},{"bytes":1964,"role":"smina-log","sha256":"1a0ce5314322f1fb1ab4f42c377ddf50780540d4e0c75e7ce1eb7d80d11c7a46","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":0.59724,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"pentacyclic-triterpenoid","molecule_id":"NP019","molecule_input_sha256":"2447304dc45cd1ac1acac75c8211d68db3272417b4e1fbb066f2c72017eb9a57","molecule_name":"Ursolic acid","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-05/NP019_seed41/NP019_seed41.sdf","pose_id":"NP019-seed41-mode1","pose_score":0.59724,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":7135,"role":"prepared-ligand-input","sha256":"2447304dc45cd1ac1acac75c8211d68db3272417b4e1fbb066f2c72017eb9a57","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":302812137},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"WCGUUGGRBIKTOS-GPOJBZKASA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"WCGUUGGRBIKTOS-GPOJBZKASA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP019","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":0.59724,"median_top_score_kcal_mol":0.59724,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[0.59724,1.91502],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":6564,"role":"pose-ensemble-sdf","sha256":"8250065632e2d4875f7aedba58cdf15c8b1b409cb66353e31c857775fa53f8f0","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":0.59724}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"dcf6635fa8939bcb519ccb178c55f86fec2b4ce62816bdf9f77cb36850a03f3f","storage":"external-artifact-root"},{"bytes":7127,"role":"prepared-ligand-input","sha256":"d39baea9fda40feff116bdf7e15712dbc3934e0e70508f3e3559f351574e14d7","storage":"external-artifact-root"},{"bytes":8147,"role":"execution-receipt","sha256":"a072b56c88c015b93f43115762abaf087596be98c27cca09c05ef3af70463b54","storage":"external-artifact-root"},{"bytes":6565,"role":"pose-ensemble-sdf","sha256":"f3e830acc297b6a01e44ef8668ef2adabe0da6db1eceea230631143602a108cc","storage":"external-artifact-root"},{"bytes":1964,"role":"smina-log","sha256":"a6e9eb9e7c46f8161f62437a83a9537e00c51945f6fe87979beecc8550587017","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-1.15242,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"pentacyclic-triterpenoid","molecule_id":"NP020","molecule_input_sha256":"d39baea9fda40feff116bdf7e15712dbc3934e0e70508f3e3559f351574e14d7","molecule_name":"Oleanolic acid","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-05/NP020_seed41/NP020_seed41.sdf","pose_id":"NP020-seed41-mode1","pose_score":-1.15242,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":7127,"role":"prepared-ligand-input","sha256":"d39baea9fda40feff116bdf7e15712dbc3934e0e70508f3e3559f351574e14d7","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":379731777},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"MIJYXULNPSFWEK-GTOFXWBISA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"MIJYXULNPSFWEK-GTOFXWBISA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP020","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-1.15242,"median_top_score_kcal_mol":-1.15242,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-1.15242,0.62452],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":6565,"role":"pose-ensemble-sdf","sha256":"f3e830acc297b6a01e44ef8668ef2adabe0da6db1eceea230631143602a108cc","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-1.15242}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"291bc57381ee4cca90933f0e83ee575f27837a70171aeb2c09f7a7c80babfa20","storage":"external-artifact-root"},{"bytes":6410,"role":"prepared-ligand-input","sha256":"b487ec68197de45af13be56642e0f8156c85f4bb9ba6c18558ac5241bd3bd03f","storage":"external-artifact-root"},{"bytes":8306,"role":"execution-receipt","sha256":"228e4d7468f50bbd4e6b868ab5439832b190b24d90a15b4d6cdb6b9c4ecd4877","storage":"external-artifact-root"},{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"5eb8f665b22708cbe32d57ecbfb1052a50a63a877e80a43b9579b01f5ec3359b","storage":"external-artifact-root"},{"bytes":2524,"role":"smina-log","sha256":"9c65e73ca2d3a6a187f18125ea25436c07ce8016cf6e0510f48ac0b3e0151d0a","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-4.88904,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"withanolide","molecule_id":"NP021","molecule_input_sha256":"b487ec68197de45af13be56642e0f8156c85f4bb9ba6c18558ac5241bd3bd03f","molecule_name":"Withaferin A","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-06/NP021_seed41/NP021_seed41.sdf","pose_id":"NP021-seed41-mode1","pose_score":-4.88904,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":6410,"role":"prepared-ligand-input","sha256":"b487ec68197de45af13be56642e0f8156c85f4bb9ba6c18558ac5241bd3bd03f","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1340987071},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"DBRXOUCRJQVYJQ-CKNDUULBSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"DBRXOUCRJQVYJQ-CKNDUULBSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP021","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-4.88904,"median_top_score_kcal_mol":-4.88904,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-4.88904,-4.39991,-3.98512,-3.34727,-3.21958,-2.85404,-2.52353,-2.35972,-2.18478],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":30519,"role":"pose-ensemble-sdf","sha256":"5eb8f665b22708cbe32d57ecbfb1052a50a63a877e80a43b9579b01f5ec3359b","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-4.88904}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"291bc57381ee4cca90933f0e83ee575f27837a70171aeb2c09f7a7c80babfa20","storage":"external-artifact-root"},{"bytes":6290,"role":"prepared-ligand-input","sha256":"10fc3cd109898628855f6748ee3c77f090890de6a228ef4d5344184410f61ec8","storage":"external-artifact-root"},{"bytes":8306,"role":"execution-receipt","sha256":"228e4d7468f50bbd4e6b868ab5439832b190b24d90a15b4d6cdb6b9c4ecd4877","storage":"external-artifact-root"},{"bytes":9849,"role":"pose-ensemble-sdf","sha256":"5fc7b1b38746b85f576d69b564fd487843d025a60bfca423f85f1231fcdbaab5","storage":"external-artifact-root"},{"bytes":2044,"role":"smina-log","sha256":"cc4852803be2dd2eb806ca275748064fcebf7ca5094fc5b5061e52876e639f38","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-4.3306,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"quinone-methide-triterpenoid","molecule_id":"NP022","molecule_input_sha256":"10fc3cd109898628855f6748ee3c77f090890de6a228ef4d5344184410f61ec8","molecule_name":"Celastrol","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-06/NP022_seed41/NP022_seed41.sdf","pose_id":"NP022-seed41-mode1","pose_score":-4.3306,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":6290,"role":"prepared-ligand-input","sha256":"10fc3cd109898628855f6748ee3c77f090890de6a228ef4d5344184410f61ec8","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1316587678},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"KQJSQWZMSAGSHN-JJWQIEBTSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"KQJSQWZMSAGSHN-JJWQIEBTSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP022","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-4.3306,"median_top_score_kcal_mol":-4.3306,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-4.3306,-3.29613,-1.6121],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":9849,"role":"pose-ensemble-sdf","sha256":"5fc7b1b38746b85f576d69b564fd487843d025a60bfca423f85f1231fcdbaab5","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-4.3306}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"291bc57381ee4cca90933f0e83ee575f27837a70171aeb2c09f7a7c80babfa20","storage":"external-artifact-root"},{"bytes":3846,"role":"prepared-ligand-input","sha256":"234a77a88a53feb42a3dae38d675f268b3d5a0dcfcb8004a09c5ad2ceebe5bbf","storage":"external-artifact-root"},{"bytes":8306,"role":"execution-receipt","sha256":"228e4d7468f50bbd4e6b868ab5439832b190b24d90a15b4d6cdb6b9c4ecd4877","storage":"external-artifact-root"},{"bytes":17361,"role":"pose-ensemble-sdf","sha256":"04c33b7fa8abb366bc5bb67d20bd4c7ebc37b9aa8a6f30c4419179c30ad6a567","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"3a3f6ba47fe50492a0a3b1d13b5763726ee6e6735cbe1dbdd8fb19fb0e899d1f","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-5.00935,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"sesquiterpene-lactone","molecule_id":"NP023","molecule_input_sha256":"234a77a88a53feb42a3dae38d675f268b3d5a0dcfcb8004a09c5ad2ceebe5bbf","molecule_name":"Artemisinin","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-06/NP023_seed41/NP023_seed41.sdf","pose_id":"NP023-seed41-mode1","pose_score":-5.00935,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3846,"role":"prepared-ligand-input","sha256":"234a77a88a53feb42a3dae38d675f268b3d5a0dcfcb8004a09c5ad2ceebe5bbf","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1516426124},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"BLUAFEHZUWYNDE-NNWCWBAJSA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"BLUAFEHZUWYNDE-NNWCWBAJSA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP023","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-5.00935,"median_top_score_kcal_mol":-5.00935,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-5.00935,-4.97538,-4.78436,-4.60346,-4.34055,-4.25187,-4.09923,-4.07156,-4.06268],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":17361,"role":"pose-ensemble-sdf","sha256":"04c33b7fa8abb366bc5bb67d20bd4c7ebc37b9aa8a6f30c4419179c30ad6a567","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-5.00935}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"},{"artifacts":[{"bytes":334538,"role":"prepared-receptor-input","sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","storage":"external-artifact-root"},{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"},{"bytes":2769,"role":"request-spec","sha256":"291bc57381ee4cca90933f0e83ee575f27837a70171aeb2c09f7a7c80babfa20","storage":"external-artifact-root"},{"bytes":3495,"role":"prepared-ligand-input","sha256":"4516a599c513c75adfe5ddbdaca87f9659694b6e94d5319548a3b588630f040e","storage":"external-artifact-root"},{"bytes":8306,"role":"execution-receipt","sha256":"228e4d7468f50bbd4e6b868ab5439832b190b24d90a15b4d6cdb6b9c4ecd4877","storage":"external-artifact-root"},{"bytes":15588,"role":"pose-ensemble-sdf","sha256":"0b19dd8d3b43e7adda1a551f9025fe8d05940f2db8f8c2495650afb8e2e2d92a","storage":"external-artifact-root"},{"bytes":2522,"role":"smina-log","sha256":"33ac4b7324c8dc94be5878af5fdb98e1bf8eae5cc2d5f6eb428546fa5f93c9ea","storage":"external-artifact-root"}],"best_vinardo_score_kcal_mol":-6.05569,"box":{"center_source":"deposited reference-ligand heavy-atom centroid","center_xyz_angstrom":[30.002316,-24.850632,-2.656789],"minimum_reference_ligand_padding_angstrom":5.0,"size_xyz_angstrom":[24.0,24.0,24.0]},"claim_ceiling":"computational-screening-hypothesis","confirmation_assessment":null,"construct":{"auth_chain_id":"B","compartment":"extracellular ectodomain","pdb_id":"9R0G","receptor_input_sha256":"78bdc047d1ff92dd85ff30039bb26b080d8cb1fe522eae701cc3bacbfe483e00","source_coordinate":{"bytes":1702671,"role":"experimental-source-coordinate","sha256":"11ab3ff0d9ccaf0201c5a72e7d9c56e09770466f751f97e8191d0091a804f0a5","storage":"external-artifact-root"}},"control_status":"library-member","control_type":null,"docking_scope":"defined extracellular pocket","evidence_class":"computational-screening-hypothesis","execution_state":"completed","failed_seed_count":0,"failure_reason":null,"model":"Smina static binary","model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","molecular_class":"sesquiterpene-lactone","molecule_id":"NP024","molecule_input_sha256":"4516a599c513c75adfe5ddbdaca87f9659694b6e94d5319548a3b588630f040e","molecule_name":"Parthenolide","pose_artifact":"model-runs/nt5e-9r0g-smina-v1/outputs/natural-product-primary-screen/batch-06/NP024_seed41/NP024_seed41.sdf","pose_id":"NP024-seed41-mode1","pose_score":-6.05569,"provenance":{"environment_identities":["fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76"],"identity_verification_states":["legacy-app-source-prefix-verified"],"normalized_at":"2026-09-04","preparation_manifest_sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","run_manifest_sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd"},"provider":"fal Serverless","receptor_preparation":{"method":"legacy-fixed-rigid-zero-charge-pdbqt/v1","ph":null,"preparation_limit":"fixed rigid PDBQT; zero partial charges; polar hydrogens are not added"},"requested_seed_count":1,"route":"defined-pocket Smina/Vinardo on fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_specific_preparation":{"artifact":{"bytes":3495,"role":"prepared-ligand-input","sha256":"4516a599c513c75adfe5ddbdaca87f9659694b6e94d5319548a3b588630f040e","storage":"external-artifact-root"},"conformer":{"method":"RDKit ETKDGv3","optimization":"MMFF94","random_seed":1576420233},"formal_charge":0,"identity_relation":"prepared form matches parent InChIKey","inchikey":"KTEXNACQROZXEV-SLXBATTESA-N","microstate":{"protonation":"PubChem source formal charge; no pH-specific protonation engine applied","state":"source-record-form","tautomer":"PubChem source representation; no alternate tautomer enumerated in this pilot package"},"prepared_inchikey":"KTEXNACQROZXEV-SLXBATTESA-N","state":"source-record-single-conformer","undefined_stereocenter_atom_indices":[]},"score_interpretation":"Vinardo docking score; lower values rank more favorably within this qualified pocket screen.","score_units":"kcal/mol","scoring_function":"Vinardo","screen_id":"NT5E-9R0G-A1JCG-smina-v1","screen_role":"prospective","screening_result_id":"SR-NT5E-9R0G-A1JCG-smina-v1-NP024","seed_agreement":{"concordance_threshold_kcal_mol":1.0,"interpretation":"Agreement summarizes top-score repeatability under one protocol; it does not measure pose convergence.","mean_top_score_kcal_mol":-6.05569,"median_top_score_kcal_mol":-6.05569,"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","seeds":[41],"state":"not-assessed-single-seed","successful_comparable_seed_count":1,"top_score_sample_standard_deviation_kcal_mol":null,"top_score_span_kcal_mol":0.0},"seed_observations":[{"affinities_kcal_mol":[-6.05569,-4.69042,-4.29656,-4.20172,-4.06837,-4.04768,-3.90924,-3.77488,-3.55809],"environment_identity":"fal-smina-v1:M:0:python-3.11:smina.static:ffe5e1e78c947f76","execution_state":"completed","failure_reason":null,"model_version":"smina.static@ffe5e1e78c947f76+app-08d5234d8fce09ad","parameters":{"cpu_threads":2,"exhaustiveness":16,"num_modes":9,"scoring":"vinardo"},"pose_artifact":{"bytes":15588,"role":"pose-ensemble-sdf","sha256":"0b19dd8d3b43e7adda1a551f9025fe8d05940f2db8f8c2495650afb8e2e2d92a","storage":"external-artifact-root"},"protocol_signature":"{\"cpu_threads\":2,\"exhaustiveness\":16,\"num_modes\":9,\"scoring\":\"vinardo\",\"stage_id\":\"natural-product-primary-screen\"}","returncode":0,"seed":41,"stage_id":"natural-product-primary-screen","top_vinardo_score_kcal_mol":-6.05569}],"site":"9R0G chain B deposited-ligand pocket","site_id":"NT5E-9R0G-A1JCG-pocket","source_library_preparation_state":"unprepared-source-record","successful_seed_count":1,"target_id":"T-ENSG00000135318","target_name":"NT5E","tool":"Smina"}],"schema_version":"codex-surface-screening-result-collection/v0.1","source_runs":[{"confirmation_plan":{"bytes":39157,"role":"confirmation-plan","sha256":"ea69040c2b09aafa310673c94bc8adbeec3b3709b6f563864d65e5aadb6a20c0","storage":"external-artifact-root"},"preparation_manifest":{"bytes":54454,"role":"preparation-manifest","sha256":"15e8581e2afa44ddefaa485e9cd8146c5cac52c263c3f237640ab98082fbedce","storage":"external-artifact-root"},"provider":"fal Serverless","run_id":"fap-6y0f-defined-pocket-screen-v1","run_manifest":{"bytes":16810,"role":"run-manifest","sha256":"02cf4d95cb5cb350bc2753299af01b874f00ec56a350d09d356dd500322a0029","storage":"external-artifact-root"},"screen_id":"FAP-6Y0F-356-smina-v1"},{"confirmation_plan":{"bytes":40077,"role":"confirmation-plan","sha256":"279365e276263d2f02dfc80d2eb898d6c6f46df7e7df3495dfc25f657fa18c6b","storage":"external-artifact-root"},"preparation_manifest":{"bytes":54017,"role":"preparation-manifest","sha256":"7271c933fac9a64437ecedcbcc900e9abb0998bd5e6d248d4957d0b39733b1bf","storage":"external-artifact-root"},"provider":"fal Serverless","run_id":"nt5e-9r0g-defined-pocket-screen-v1","run_manifest":{"bytes":11440,"role":"run-manifest","sha256":"53b5485438a3478ff509c7ac62f9506251a70d83e1d00295a67f9d98178ae0bd","storage":"external-artifact-root"},"screen_id":"NT5E-9R0G-A1JCG-smina-v1"}],"summary":{"completed_molecule_count":58,"execution_complete":true,"failed_molecule_count":0,"failed_seed_count":0,"noncognate_control_count":8,"not_run_molecule_count":0,"partial_molecule_count":0,"positive_control_count":2,"prospective_molecule_count":48,"requested_molecule_count":58,"requested_seed_count":110,"run_count":2,"site_count":2,"successful_seed_count":110,"target_count":2}}
