{"schema_version":"surface-atlas-scientific-provenance/v1","source_schema_version":"codex-surface-report-run/v0.1","source_sha256":"f81efe7e1b074ee697b27b14ef4f50130af7d9dd1d6857357ed5710665b81ba2","note":"Scientific fields retained from the source. Operational fields are omitted. Exported-byte hashes are recorded in reader-export-manifest.json.","scientific_record":{"atlas_id":"pmmr-mucinous-colon","claim_ceiling":"source-derived public evidence; computational hypotheses remain separately labeled","coverage_label":"Searched in-scope target census","execution_label":"Atlas with screening or design records","generated_at":"2026-09-05","molecular_sequences":[{"descriptor_sha256":"084eedf53dd8073bd24937f5c07e6e057329d299ab485a572abd5d826bc6dfdf","entries":[{"chain_id":"B","coordinate":{"chain_id":"B","source_sha256":"0e344a2524ff99d74110e42d4fe72978231ffad71fde81e2066fa96ccd59aff3"},"fasta_href":"data/artifacts/molecular-sequences/c6012178fe0017812e35.fasta","label":"BoltzGen 03","role":"Designed candidate","sequence_length":64,"sequence_sha256":"ccc912f3587e2527d082c7e39b439feda882f3a71a006545ee7561754977fcd2","source_id":"ceacam5-cp3-boltzgen-03","source_sha256":"c6012178fe0017812e3561fce30552b697d4ac2f4de1c39742cb9fbe29982541","target_id":"T-ENSG00000105388"},{"chain_id":"B","coordinate":{"chain_id":"B","source_sha256":"aed9d4178ca7f82777b92128f261750af536cb38373fa233bc628bd8c6c4269d"},"fasta_href":"data/artifacts/molecular-sequences/0b6ecf7f5de27a337729.fasta","label":"Proteina–Complexa 02","role":"Designed candidate","sequence_length":64,"sequence_sha256":"238c73b712b8664a3722299b5ed7cc094548c5723ff37792d7e5b5d1d0c42414","source_id":"ceacam5-cp3-proteina-complexa-02","source_sha256":"0b6ecf7f5de27a33772920506b1043c19245ed354d5cca2156a0bcfb14032bdc","target_id":"T-ENSG00000105388"},{"chain_id":"B","coordinate":{"chain_id":"B","source_sha256":"53fac805847f2f3a0428b678a8905961ace5786aa6aebcc4c43eaac05af0af6e"},"fasta_href":"data/artifacts/molecular-sequences/581e13fb3e1278f475da.fasta","label":"Proteina–Complexa 03","role":"Designed candidate","sequence_length":64,"sequence_sha256":"493fcdfa980f4f969d0729a1fc59983ebfc076b1b3100ef4610e6383034dcff0","source_id":"ceacam5-cp3-proteina-complexa-03","source_sha256":"581e13fb3e1278f475da347101cbf31ae585392ea5a9b1fda0d0684f839d9203","target_id":"T-ENSG00000105388"},{"chain_id":"B","coordinate":{"chain_id":"B","source_sha256":"eb09b651581796b4d9f948256896c5b17a62b288f173deebdc4b027784f3d9d9"},"fasta_href":"data/artifacts/molecular-sequences/1d049474ae94b904132b.fasta","label":"PXDesign–ProteinMPNN 03","role":"Designed candidate","sequence_length":64,"sequence_sha256":"6e14cddf2dc1b16095def35925cc6bd00a51174f17e4596200671bd4b0916413","source_id":"ceacam5-cp3-pxdesign-proteinmpnn-03","source_sha256":"1d049474ae94b904132b690b09710ce6b6f465de221256bef5ba82822e99c3bf","target_id":"T-ENSG00000105388"},{"chain_id":"B","coordinate":{"chain_id":"B","source_sha256":"8d376faecc96dda16d8aafe35315cb914d094a06b7d1384b2825015bc3205263"},"fasta_href":"data/artifacts/molecular-sequences/1a64a53cff0b488a848b.fasta","label":"Tusamitamab heavy-chain variable domain (VH)","role":"Positive control","sequence_length":117,"sequence_sha256":"dc2d2dafb0d66ba8f21f781a828f40c6d487ae3a5ea347b62dea6ec33f0c3373","source_id":"control-positive-8bw0-tusamitamab-vh","source_sha256":"1a64a53cff0b488a848b3d7ccbd806b2cdfa2678d404202f3a458775d1e62974","target_id":"T-ENSG00000105388"},{"chain_id":"B","coordinate":{"chain_id":"B","source_sha256":"b7d6789c49c4a3d5b3321bc6e21c73c5c3d4e1a8dd04d7dadce178a02e196bd1"},"fasta_href":"data/artifacts/molecular-sequences/831790ee74355ac17793.fasta","label":"Shuffled tusamitamab VH","role":"Negative control","sequence_length":117,"sequence_sha256":"892c0955f046338f0572371a87127b4cc966459921d72dff52cbb9b0c57e55aa","source_id":"control-negative-8bw0-vh-composition-shuffle","source_sha256":"831790ee74355ac177930cd8b9fb7b4a4c71f9b3b1e903224dad6c232277933c","target_id":"T-ENSG00000105388"},{"chain_id":"B","coordinate":{"chain_id":"B","source_sha256":"3f188d647fadc176a3445151ec0e0a7821bf2f6b92dd92546ba2e05275cf12e4"},"fasta_href":"data/artifacts/molecular-sequences/0fac3e3346b3075a5e86.fasta","label":"Paired control: heavy-chain variable domain (VH)","role":"Paired antibody control","sequence_length":117,"sequence_sha256":"dc2d2dafb0d66ba8f21f781a828f40c6d487ae3a5ea347b62dea6ec33f0c3373","source_id":"control-positive-8bw0-paired-vh-vl","source_sha256":"0fac3e3346b3075a5e8607cd94a236b9b388a3b6cb714c329c897164c785f861","target_id":"T-ENSG00000105388"},{"chain_id":"C","coordinate":{"chain_id":"C","source_sha256":"3f188d647fadc176a3445151ec0e0a7821bf2f6b92dd92546ba2e05275cf12e4"},"fasta_href":"data/artifacts/molecular-sequences/0e21b49c33eedcfc814f.fasta","label":"Paired control: light-chain variable domain (VL)","role":"Paired antibody control","sequence_length":104,"sequence_sha256":"5444141719c8bf05577503690fac576b0754dc02c6a0059f0f51c50a9a686d78","source_id":"control-positive-8bw0-paired-vh-vl:vl","source_sha256":"0e21b49c33eedcfc814f05e092c403738104b506a2245d46b37225ea54991303","target_id":"T-ENSG00000105388"}],"title":"CEACAM5 checkpoint candidates and controls"}],"pages":["binders.html","campaigns.html","design-sources.html","explore.html","index.html","mindmap.html","molecular-library.html","screening.html","strategy.html","structures.html","study.html","target-abcb1-t-ensg00000085563.html","target-abcg2-t-ensg00000118777.html","target-ace2-t-ensg00000130234.html","target-adam10-t-ensg00000137845.html","target-adam12-t-ensg00000148848.html","target-adam17-t-ensg00000151694.html","target-alk-t-ensg00000171094.html","target-alpp-t-ensg00000163283.html","target-ano7-t-ensg00000146205.html","target-antxr1-t-ensg00000169604.html","target-antxr2-t-ensg00000163297.html","target-arl4c-t-ensg00000188042.html","target-atp1b1-t-ensg00000143153.html","target-axl-t-ensg00000167601.html","target-b2m-t-ensg00000166710.html","target-blnk-t-ensg00000095585.html","target-bmpr1a-t-ensg00000107779.html","target-bsg-t-ensg00000172270.html","target-ca9-t-ensg00000107159.html","target-ccr9-t-ensg00000173585.html","target-cd163-t-ensg00000177575.html","target-cd19-t-ensg00000177455.html","target-cd200-t-ensg00000091972.html","target-cd247-t-ensg00000198821.html","target-cd248-t-ensg00000174807.html","target-cd274-t-ensg00000120217.html","target-cd276-t-ensg00000103855.html","target-cd34-t-ensg00000174059.html","target-cd4-t-ensg00000010610.html","target-cd44-t-ensg00000026508.html","target-cd47-t-ensg00000196776.html","target-cd5-t-ensg00000110448.html","target-cd55-t-ensg00000196352.html","target-cd68-t-ensg00000129226.html","target-cd74-t-ensg00000019582.html","target-cd82-t-ensg00000085117.html","target-cd8a-t-ensg00000153563.html","target-cdh1-t-ensg00000039068.html","target-cdh17-t-ensg00000079112.html","target-cdh3-t-ensg00000062038.html","target-ceacam5-t-ensg00000105388.html","target-ceacam6-t-ensg00000086548.html","target-cemip2-t-ensg00000135048.html","target-ckap4-t-ensg00000136026.html","target-cldn1-t-ensg00000163347.html","target-cldn18-t-ensg00000066405.html","target-cldn2-t-ensg00000165376.html","target-cldn3-t-ensg00000165215.html","target-cldn4-t-ensg00000189143.html","target-cldn7-t-ensg00000181885.html","target-cspg4-t-ensg00000173546.html","target-ctnnb1-t-ensg00000168036.html","target-ctnnd1-t-ensg00000198561.html","target-ddr1-t-ensg00000204580.html","target-dll3-t-ensg00000090932.html","target-dll4-t-ensg00000128917.html","target-dpp4-t-ensg00000197635.html","target-egf-t-ensg00000138798.html","target-egfr-t-ensg00000146648.html","target-eng-t-ensg00000106991.html","target-enpp1-t-ensg00000197594.html","target-entpd1-t-ensg00000138185.html","target-epcam-t-ensg00000119888.html","target-epha2-t-ensg00000142627.html","target-ephb1-t-ensg00000154928.html","target-ephb2-t-ensg00000133216.html","target-ephb4-t-ensg00000196411.html","target-erbb2-t-ensg00000141736.html","target-erbb3-t-ensg00000065361.html","target-erbb4-t-ensg00000178568.html","target-esr1-t-ensg00000091831.html","target-fap-t-ensg00000078098.html","target-faslg-t-ensg00000117560.html","target-fgfr1-t-ensg00000077782.html","target-fgfr2-t-ensg00000066468.html","target-fgfr3-t-ensg00000068078.html","target-flt1-t-ensg00000102755.html","target-folr1-t-ensg00000110195.html","target-fut3-t-ensg00000171124.html","target-gja1-t-ensg00000152661.html","target-gpa33-t-ensg00000143167.html","target-gpc3-t-ensg00000147257.html","target-gper1-t-ensg00000164850.html","target-gpr12-t-ensg00000132975.html","target-grin2a-t-ensg00000183454.html","target-grpr-t-ensg00000126010.html","target-gucy2c-t-ensg00000070019.html","target-havcr2-t-ensg00000135077.html","target-hla-b-t-ensg00000234745.html","target-hla-e-t-ensg00000204592.html","target-igf1r-t-ensg00000140443.html","target-irs1-t-ensg00000169047.html","target-itga1-t-ensg00000213949.html","target-itga11-t-ensg00000137809.html","target-itga9-t-ensg00000144668.html","target-itgae-t-ensg00000083457.html","target-itgav-t-ensg00000138448.html","target-itgb3-t-ensg00000259207.html","target-itgb5-t-ensg00000082781.html","target-itgb6-t-ensg00000115221.html","target-jag1-t-ensg00000101384.html","target-kdr-t-ensg00000128052.html","target-kit-t-ensg00000157404.html","target-kl-t-ensg00000133116.html","target-l1cam-t-ensg00000198910.html","target-lgr5-t-ensg00000139292.html","target-lgr6-t-ensg00000133067.html","target-lilrb1-t-ensg00000104972.html","target-lima1-t-ensg00000050405.html","target-lrrc15-t-ensg00000172061.html","target-lrrc4c-t-ensg00000148948.html","target-ly6g6d-t-ensg00000244355.html","target-lzts1-t-ensg00000061337.html","target-mas1-t-ensg00000130368.html","target-met-t-ensg00000105976.html","target-mib1-t-ensg00000101752.html","target-mme-t-ensg00000196549.html","target-mmp14-t-ensg00000157227.html","target-mrc1-t-ensg00000260314.html","target-msln-t-ensg00000102854.html","target-mst1r-t-ensg00000164078.html","target-muc1-t-ensg00000185499.html","target-muc13-t-ensg00000173702.html","target-muc16-t-ensg00000181143.html","target-muc17-t-ensg00000169876.html","target-muc4-t-ensg00000145113.html","target-ncam1-t-ensg00000149294.html","target-nectin4-t-nectin4.html","target-neo1-t-ensg00000067141.html","target-ngfr-t-ensg00000064300.html","target-notch1-t-ensg00000148400.html","target-notch3-t-ensg00000074181.html","target-nrg1-t-ensg00000157168.html","target-nrp1-t-ensg00000099250.html","target-nt5e-t-ensg00000135318.html","target-ogt-t-ensg00000147162.html","target-or4m1-t-ensg00000176299.html","target-pdcd1-t-ensg00000188389.html","target-pdcd1lg2-t-ensg00000197646.html","target-pdgfra-t-ensg00000134853.html","target-pdgfrb-t-ensg00000113721.html","target-pecam1-t-ensg00000261371.html","target-pik3cg-t-ensg00000105851.html","target-plaur-t-ensg00000011422.html","target-plvap-t-ensg00000130300.html","target-prom1-t-ensg00000007062.html","target-ptk7-t-ensg00000112655.html","target-ptprc-t-ensg00000081237.html","target-pvr-t-ensg00000073008.html","target-pvrl2-t-ensg00000130202.html","target-ret-t-ensg00000165731.html","target-rho-t-ensg00000163914.html","target-ripk1-t-ensg00000137275.html","target-rnf43-t-ensg00000108375.html","target-ror1-t-ensg00000185483.html","target-ros1-t-ensg00000047936.html","target-sell-t-ensg00000188404.html","target-si-t-ensg00000090402.html","target-slc1a2-t-ensg00000110436.html","target-slc22a16-t-ensg00000004809.html","target-slc27a5-t-ensg00000083807.html","target-slc2a1-t-ensg00000117394.html","target-slc34a2-t-ensg00000157765.html","target-slc38a11-t-ensg00000169507.html","target-slc3a2-t-ensg00000168003.html","target-slc4a11-t-ensg00000088836.html","target-slc7a5-t-ensg00000103257.html","target-slc8b1-t-ensg00000089060.html","target-slco4a1-t-ensg00000101187.html","target-src-t-ensg00000197122.html","target-sstr2-t-ensg00000180616.html","target-st14-t-ensg00000149418.html","target-steap4-t-ensg00000127954.html","target-tacstd2-t-ensg00000184292.html","target-tgfa-t-ensg00000163235.html","target-tgfbr2-t-ensg00000163513.html","target-tmprss11b-t-ensg00000185873.html","target-tnfrsf4-t-ensg00000186827.html","target-tnfrsf8-t-ensg00000120949.html","target-tnfsf4-t-ensg00000117586.html","target-tpbg-t-ensg00000146242.html","target-trpv6-t-ensg00000165125.html","target-tspan8-t-ensg00000127324.html","target-vsig1-t-ensg00000101842.html","target-vtcn1-t-ensg00000134258.html","targets.html","treatments.html"],"run_id":"2026-09-04-workbench-polished-v2","source_collection_hashes":{"discovered-entities.json":"ca456767c2ef85c60f6bd266d96c131c8943e09c7179ba616286f2be50756927","excluded-targets.json":"2c1b4ba20df8f33ba49084a293f7fba725d775f8c3eeae8bb3d1d003a25975da","interventions.json":"e7935e91eee2054a968d34ed0c38104ae37343e790aa9ae0cc08c30f20586ed7","molecular-library.json":"670cede98177a0d11b6ac666750b9c5fd131d020e852927baf3ec7e4e800cb0c","opportunities.json":"edcd492b57337024f6ed6d753791ef7c566f8d512b1753b6399b7c63af3a95b7","screening-results.json":"a5a56bc3fb954cf011c9ac5c69b8a532d555ea3dc1dc257a10dcb01dcfe193b9","structures.json":"42015660cf5e51fb59cf5159077b29a3daae6012fca9fde8307e9487815ab72d","targets.json":"c6e20ca44b161b182f2c298dde20afcfb384e382a71d0926f21461aec3fd29a4"},"source_ledger_sha256":"9e8b8abad54d024a15554078ac9aacc6d7cee15a27a80f7a43f0e42200cdda32","source_plan_sha256":"8a7b6fdea23419bd724d305a596943902887cb6bbc195bb3598313f4cf98b7b0","strategy_sources":{"extracellular-determinants.csv":{"derived_from_sha256":"fa64cb7a9b627c6eceb19482d24745f2f5ae36f896931c48e5408c6653669498","export_sha256":"e06377eb4605231433fde4480421d467f296af894b239231ae978c3ff45c315c","hash_semantics":"source_sha256 or derived_from_sha256 identifies canonical science input; package_sha256 identifies the local report file; export_sha256 identifies this reader file.","href":"data/extracellular-determinants.csv","package_sha256":"e06377eb4605231433fde4480421d467f296af894b239231ae978c3ff45c315c"},"extracellular-determinants.json":{"export_sha256":"fa64cb7a9b627c6eceb19482d24745f2f5ae36f896931c48e5408c6653669498","hash_semantics":"source_sha256 or derived_from_sha256 identifies canonical science input; package_sha256 identifies the local report file; export_sha256 identifies this reader file.","href":"data/extracellular-determinants.json","package_sha256":"fa64cb7a9b627c6eceb19482d24745f2f5ae36f896931c48e5408c6653669498","source_sha256":"fa64cb7a9b627c6eceb19482d24745f2f5ae36f896931c48e5408c6653669498"},"science-campaign-handoff.json":{"export_sha256":"44c0e54f93390567cc148b990bc587f76c373c797638b954d332f9bc6daa8b97","hash_semantics":"source_sha256 or derived_from_sha256 identifies canonical science input; package_sha256 identifies the local report file; export_sha256 identifies this reader file.","href":"data/science-campaign-handoff.json","package_sha256":"1eb5771e9181eebf08ad6b27f27df4e307b40728bf15a1d05beb26d7813ffe2e","source_sha256":"1eb5771e9181eebf08ad6b27f27df4e307b40728bf15a1d05beb26d7813ffe2e"},"target-action-modality-matrix.csv":{"derived_from_sha256":"8f466368b83b5509e78d6a41a060651fc9f88fbdd29a3fe760d573d0db6d3ebc","export_sha256":"309919ed6ca04aac635061c08b8d85770e17977d90f7e2bc644acc12075ad05d","hash_semantics":"source_sha256 or derived_from_sha256 identifies canonical science input; package_sha256 identifies the local report file; export_sha256 identifies this reader file.","href":"data/target-action-modality-matrix.csv","package_sha256":"309919ed6ca04aac635061c08b8d85770e17977d90f7e2bc644acc12075ad05d"},"target-action-modality-matrix.json":{"export_sha256":"9dd8d521f9a5a21d1fa3b1d2594694c5852be28b6f541b1641373cd2fe4042c6","hash_semantics":"source_sha256 or derived_from_sha256 identifies canonical science input; package_sha256 identifies the local report file; export_sha256 identifies this reader file.","href":"data/target-action-modality-matrix.json","package_sha256":"9dd8d521f9a5a21d1fa3b1d2594694c5852be28b6f541b1641373cd2fe4042c6","source_sha256":"8f466368b83b5509e78d6a41a060651fc9f88fbdd29a3fe760d573d0db6d3ebc"}}}}
