Surface AtlasMucinous colon cancer

CD163

Scavenger receptor cysteine-rich type 1 protein M130. UniProt annotates extracellular residues 42–1050.

Sequence and protein regions

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RNA expression by cell type

Percentage of cells with detected CD163 RNA in the public colon adenocarcinoma cell groups.

Macrophages (group B)52.4%
Macrophages (group A)25.2%
Dendritic cells1.3%
Adipocytes0.8%
Tumor cells0.5%
Fibroblasts0.4%
Endothelial cells0.4%
CD8 T cells0.3%
Regulatory T cells0.3%
CD4 T cells0.3%
B cells0.2%
Granulocytes0.0%
Natural killer cells0.0%
RNA detection · Cancer Surfaceome Atlas, Table S6, row 250. Source study · Measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000177575
UniProt accession
Q86VB7
Sequence state
available
Canonical sequence
Yes
Length in amino acids
1156
Sequence SHA-256
96fdc58597858ba47ca31f55c5a72871b8527f144c181d1b438dbfe6d6cd3cc8
View and select the full canonical sequence
Sequence positions 1–1156

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–41
1–41
Membrane-spanning segments
1051–1071: Helical
1051–1071 (Helical)
Source-annotated domains
42–1050: Extracellular1072–1156: Cytoplasmic
42–1050 (Extracellular); 1072–1156 (Cytoplasmic)
Source-annotated extracellular intervals
42–1050
42–1050

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
4210501009
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
97c10128066bbf4b6a7590782292f89b4bb3cd0d7c45e77d28e53e2ca7690e37
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

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Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
Q86VB7

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subcellular_location
SUBCELLULAR LOCATION: [Soluble CD163]: Secreted {ECO:0000269|PubMed:12296867}.; SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:10577520, ECO:0000269|PubMed:10648003}; Single-pass type I membrane protein {ECO:0000269|PubMed:10577520, ECO:0000269|PubMed:10648003}. Note=Isoform 1 and isoform 2 show a lower surface expression when expressed in cells.
transmembrane
TRANSMEM 1051..1071; /note="Helical"; /evidence="ECO:0000255"
topological_domain
TOPO_DOM 42..1050; /note="Extracellular"; /evidence="ECO:0000255"; TOPO_DOM 1072..1156; /note="Cytoplasmic"; /evidence="ECO:0000255"
signal_peptide
SIGNAL 1..41; /evidence="ECO:0000255"
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
Scavenger receptor cysteine-rich type 1 protein M130
Protein location
Transmembrane protein
Canonical sequence
Q86VB7 · 1,156 amino acids
Extracellular region
UniProt annotates extracellular residues 42–1050.

Expression in normal tissues

RNA specificity
Tissue enhanced
RNA distribution
Detected in all
RNA tissue-specific nTPM
lymphoid tissue: 224.8
Protein specificity
Tissue enhanced
Protein distribution
Detected in all
Immunohistochemistry reliability
Enhanced
Immunofluorescence reliability
Supported
Protein tissue-specific intensity
lymphoid tissue: 54,790,663.4
Tissue cell-type enrichment
Adipose subcutaneous - Macrophages, Adipose visceral - Macrophages, Adrenal gland - Macrophages, Breast - Macrophages, Colon - Macrophages, Heart muscle - Macrophages, Kidney - Macrophages, Lung - Macrophages, Minor Salivary Gland - Macrophages, Pancreas - Macrophages, Pituitary gland - Macrophages, Prostate - Macrophages, Skeletal muscle - Macrophages, Skin - Macrophages, Spleen - Macrophages, Stomach - Macrophages, Thyroid gland - Macrophages
Subcellular location
Plasma membrane

Sources and downloads

CD163 · ENSG00000177575 · Q86VB7

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