Surface AtlasMucinous colon cancer

CD5

T-cell surface glycoprotein CD5. UniProt annotates extracellular residues 25–372.

Sequence and protein regions

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RNA expression by cell type

Percentage of cells with detected CD5 RNA in the public colon adenocarcinoma cell groups.

Regulatory T cells17.9%
CD4 T cells11.9%
CD8 T cells8.3%
Dendritic cells3.3%
Macrophages (group B)0.7%
Macrophages (group A)0.6%
Tumor cells0.3%
Fibroblasts0.3%
Endothelial cells0.2%
Adipocytes0.2%
B cells0.2%
Granulocytes0.0%
Natural killer cells0.0%
RNA detection · Cancer Surfaceome Atlas, Table S6, row 109. Source study · Measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000110448
UniProt accession
P06127
Sequence state
available
Canonical sequence
Yes
Length in amino acids
495
Sequence SHA-256
c3334126628292d093cfd45394f323a3ca2846ccb365862068b5196f3c27f2b4
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Sequence positions 1–495

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–24
1–24
Membrane-spanning segments
373–402: Helical
373–402 (Helical)
Source-annotated domains
25–372: Extracellular403–495: Cytoplasmic
25–372 (Extracellular); 403–495 (Cytoplasmic)
Source-annotated extracellular intervals
25–372
25–372

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
25372348
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
14f0bea1872f2748af1bcd6e62083dbfef9a84ee2b075ce765915baa2e2dc168
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

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Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
P06127

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subcellular_location
SUBCELLULAR LOCATION: Cell membrane {ECO:0000250|UniProtKB:P13379}; Single-pass type I membrane protein {ECO:0000250|UniProtKB:P13379}.
transmembrane
TRANSMEM 373..402; /note="Helical"; /evidence="ECO:0000255"
topological_domain
TOPO_DOM 25..372; /note="Extracellular"; /evidence="ECO:0000255"; TOPO_DOM 403..495; /note="Cytoplasmic"; /evidence="ECO:0000255"
signal_peptide
SIGNAL 1..24
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
T-cell surface glycoprotein CD5
Protein location
Transmembrane protein
Canonical sequence
P06127 · 495 amino acids
Extracellular region
UniProt annotates extracellular residues 25–372.

Expression in normal tissues

RNA specificity
Tissue enhanced
RNA distribution
Detected in many
RNA tissue-specific nTPM
lymphoid tissue: 43.3
Protein specificity
Tissue enhanced
Protein distribution
Detected in some
Immunohistochemistry reliability
Enhanced
Protein tissue-specific intensity
lymphoid tissue: 7,472,923.3
Tissue cell-type enrichment
Adipose subcutaneous - T-cells, Adipose visceral - T-cells, Adrenal gland - T-cells, Breast - T-cells, Colon - T-cells, Heart muscle - T-cells, Kidney - T-cells, Liver - T-cells, Lung - T-cells, Prostate - T-cells, Spleen - T-cells, Thyroid gland - T-cells

Sources and downloads

CD5 · ENSG00000110448 · P06127

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