Surface AtlasMucinous colon cancer

CD68

Macrosialin. UniProt annotates extracellular residues 22–319.

Sequence and protein regions

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RNA expression by cell type

Percentage of cells with detected CD68 RNA in the public colon adenocarcinoma cell groups.

Macrophages (group B)77.8%
Macrophages (group A)48.6%
Dendritic cells26.8%
Fibroblasts18.8%
Granulocytes15.4%
Tumor cells13.2%
Endothelial cells5.5%
Adipocytes5.1%
B cells4.0%
Regulatory T cells3.3%
CD4 T cells1.7%
Natural killer cells1.7%
CD8 T cells1.5%
RNA detection · Cancer Surfaceome Atlas, Table S6, row 55. Source study · Measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000129226
UniProt accession
P34810
Sequence state
available
Canonical sequence
Yes
Length in amino acids
354
Sequence SHA-256
1ce65b514b2da647edba33b17ba6587a73fde0645399710a68c43668c3e9bfcf
View and select the full canonical sequence
Sequence positions 1–354

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–21
1–21
Membrane-spanning segments
320–344: Helical
320–344 (Helical)
Source-annotated domains
22–319: Extracellular345–354: Cytoplasmic
22–319 (Extracellular); 345–354 (Cytoplasmic)
Source-annotated extracellular intervals
22–319
22–319

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
22319298
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
dee6a13448defa63dd34e87e5179d3f43b9ee7158b5282116644b5c42a7a93b7
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

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Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
P34810

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subcellular_location
SUBCELLULAR LOCATION: [Isoform Short]: Cell membrane; Single-pass type I membrane protein.; SUBCELLULAR LOCATION: [Isoform Long]: Endosome membrane; Single-pass type I membrane protein. Lysosome membrane; Single-pass type I membrane protein.
transmembrane
TRANSMEM 320..344; /note="Helical"; /evidence="ECO:0000255|PROSITE-ProRule:PRU00740"
topological_domain
TOPO_DOM 22..319; /note="Extracellular"; /evidence="ECO:0000255"; TOPO_DOM 345..354; /note="Cytoplasmic"; /evidence="ECO:0000255|PROSITE-ProRule:PRU00740"
signal_peptide
SIGNAL 1..21; /evidence="ECO:0000255"
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
Macrosialin
Protein location
Transmembrane protein
Canonical sequence
P34810 · 354 amino acids
Extracellular region
UniProt annotates extracellular residues 22–319.

Expression in normal tissues

RNA specificity
Tissue enhanced
RNA distribution
Detected in all
RNA tissue-specific nTPM
lung: 337.0; lymphoid tissue: 349.0
Protein specificity
Tissue enriched
Protein distribution
Detected in single
Immunohistochemistry reliability
Enhanced
Immunofluorescence reliability
Supported
Protein tissue-specific intensity
lymphoid tissue: 97,677.0
Tissue cell-type enrichment
Adipose subcutaneous - Macrophages, Adipose visceral - Macrophages, Breast - Macrophages, Colon - Macrophages, Heart muscle - Macrophages, Lung - Macrophages, Pituitary gland - Macrophages, Prostate - Macrophages, Skeletal muscle - Macrophages, Spleen - Macrophages, Testis - Macrophages, Thyroid gland - Macrophages
Subcellular location
Golgi apparatus, Vesicles

Sources and downloads

CD68 · ENSG00000129226 · P34810

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