Surface AtlasMucinous colon cancer

ERBB2

Receptor tyrosine-protein kinase erbB-2. UniProt annotates extracellular residues 23–652.

Published binding interface

Structure 1N8Z records ERBB2 in contact with trastuzumab Fab. Select the contact residues to inspect this interface.

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RNA expression by cell type

Percentage of cells with detected ERBB2 RNA in the public colon adenocarcinoma cell groups.

Tumor cells21.7%
Fibroblasts12.6%
Adipocytes6.6%
Endothelial cells3.7%
Dendritic cells3.3%
Natural killer cells2.9%
Macrophages (group B)1.8%
Granulocytes1.4%
CD8 T cells1.0%
CD4 T cells0.8%
Macrophages (group A)0.8%
B cells0.8%
Regulatory T cells0.7%
RNA detection · Cancer Surfaceome Atlas, Table S6, row 8. Source study · Measurements (JSON)

Inspect the molecular structure

Published reference structure

ERBB2 with trastuzumab

Deposited structure 1N8Z. ERBB2 extracellular domain bound by trastuzumab Fab.
Deposited structure 1N8Z. ERBB2 extracellular domain bound by trastuzumab Fab.

PDB entry
1N8Z
Target ID
T-ENSG00000141736
  • trastuzumab Fab light chain · chain A (ribbon)
  • trastuzumab Fab heavy chain · chain B (ribbon)
  • ERBB2 extracellular domain · chain C (ribbon)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000141736
UniProt accession
P04626
Sequence state
available
Canonical sequence
Yes
Length in amino acids
1255
Sequence SHA-256
a5f256fc653515d110f6dd48ad55b8ea21bf6d45af33b7f5c182c6c31455b636
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Sequence positions 1–1255

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–22
1–22
Membrane-spanning segments
653–675: Helical
653–675 (Helical)
Source-annotated domains
23–652: Extracellular676–1255: Cytoplasmic
23–652 (Extracellular); 676–1255 (Cytoplasmic)
Source-annotated extracellular intervals
23–652
23–652

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
23652630
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
a1f6b928de9224f7c36c0321f82b1837333fab03ac7accebc06b41b8f7885ae3
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

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Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
P04626

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subcellular_location
SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:32381043}; Single-pass type I membrane protein {ECO:0000255}. Cell projection, ruffle membrane {ECO:0000269|PubMed:34380438}; Single-pass type I membrane protein {ECO:0000255}. Note=Internalized from the cell membrane in response to EGF stimulation. {ECO:0000269|PubMed:32381043}.; SUBCELLULAR LOCATION: [Isoform 1]: Cell membrane {ECO:0000269|PubMed:31138794, ECO:0000269|PubMed:33497358}; Single-pass type I membrane protein {ECO:0000255}. Early endosome {ECO:0000269|PubMed:31138794}. Cytoplasm, perinuclear region. Nucleus. Note=Translocation to the nucleus requires endocytosis, probably endosomal sorting and is mediated by importin beta-1/KPNB1. Also detected in VPS35-positive endosome-to-TGN retrograde vesicles (PubMed:31138794). {ECO:0000269|PubMed:31138794}.; SUBCELLULAR LOCATION: [Isoform 2]: Cytoplasm. Nucleus.; SUBCELLULAR LOCATION: [Isoform 3]: Cytoplasm. Nucleus.
transmembrane
TRANSMEM 653..675; /note="Helical"; /evidence="ECO:0000255"
topological_domain
TOPO_DOM 23..652; /note="Extracellular"; /evidence="ECO:0000255"; TOPO_DOM 676..1255; /note="Cytoplasmic"; /evidence="ECO:0000255"
signal_peptide
SIGNAL 1..22; /evidence="ECO:0000255"
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
Receptor tyrosine-protein kinase erbB-2
Protein location
Transmembrane protein
Canonical sequence
P04626 · 1,255 amino acids
Extracellular region
UniProt annotates extracellular residues 23–652.
More structures and generated models

Expression in normal tissues

RNA specificity
Low tissue specificity
RNA distribution
Detected in all
Protein specificity
Tissue enriched
Protein distribution
Detected in many
Immunohistochemistry reliability
Enhanced
Immunofluorescence reliability
Enhanced
Protein tissue-specific intensity
lymphoid tissue: 8,296,603.9
Tissue cell-type enrichment
Adrenal gland - Fibroblasts, Breast - Breast glandular cells, Lung - Alveolar cells type 1, Pituitary gland - Undifferentiated cells (Pituitary gland), Spleen - Fibroblasts_1
Subcellular location
Plasma membrane

Structures

Sources and downloads

ERBB2 · ENSG00000141736 · P04626

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