Surface AtlasMucinous colon cancer

HLA-B

HLA class I histocompatibility antigen, B alpha chain. UniProt annotates extracellular residues 25–309.

Sequence and protein regions

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RNA expression by cell type

Percentage of cells with detected HLA-B RNA in the public colon adenocarcinoma cell groups.

Regulatory T cells95.1%
CD8 T cells93.7%
CD4 T cells93.2%
Endothelial cells93.1%
Dendritic cells92.2%
Natural killer cells89.5%
B cells87.9%
Macrophages (group B)87.2%
Macrophages (group A)83.5%
Fibroblasts82.8%
Granulocytes68.3%
Tumor cells65.2%
Adipocytes63.0%
RNA detection · Cancer Surfaceome Atlas, Table S6, row 56. Source study · Measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000234745
UniProt accession
P01889
Sequence state
available
Canonical sequence
Yes
Length in amino acids
362
Sequence SHA-256
5de81f208e7148a6c5163dc26042423d3e3fdd21b2eb3c95625b3a80f58583fb
View and select the full canonical sequence
Sequence positions 1–362

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–24
1–24
Membrane-spanning segments
310–333: Helical
310–333 (Helical)
Source-annotated domains
25–309: Extracellular334–362: Cytoplasmic
25–309 (Extracellular); 334–362 (Cytoplasmic)
Source-annotated extracellular intervals
25–309
25–309

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
25309285
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
b6310ea0990dc128268c31edc87005ea3822adc0baf53c0d4cd4504272567108
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

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Open sequence source
Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
P01889

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subcellular_location
SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:25480565, ECO:0000269|PubMed:26439010, ECO:0000269|PubMed:9620674}; Single-pass type I membrane protein {ECO:0000255}. Endoplasmic reticulum membrane {ECO:0000305|PubMed:9620674}; Single-pass type I membrane protein {ECO:0000255}.
transmembrane
TRANSMEM 310..333; /note="Helical"; /evidence="ECO:0000255"
topological_domain
TOPO_DOM 25..309; /note="Extracellular"; /evidence="ECO:0000255"; TOPO_DOM 334..362; /note="Cytoplasmic"; /evidence="ECO:0000255"
signal_peptide
SIGNAL 1..24; /evidence="ECO:0000269|PubMed:518865"
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
HLA class I histocompatibility antigen, B alpha chain
Protein location
Transmembrane protein
Canonical sequence
P01889 · 362 amino acids
Extracellular region
UniProt annotates extracellular residues 25–309.

Expression in normal tissues

RNA specificity
Tissue enhanced
RNA distribution
Detected in many
RNA tissue-specific nTPM
lymphoid tissue: 2,350.0
Protein specificity
Tissue enhanced
Protein distribution
Detected in all
Immunohistochemistry reliability
Enhanced
Protein tissue-specific intensity
lymphoid tissue: 152,683,958.1
Tissue cell-type enrichment
Skin - Keratinocyte (other), Thyroid gland - T-cells

Sources and downloads

HLA-B · ENSG00000234745 · P01889

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