Surface AtlasMucinous colon cancer

KDR

Vascular endothelial growth factor receptor 2. UniProt annotates extracellular residues 20–764.

Predicted protein structure

A downloaded AlphaFold model connects the KDR sequence to its predicted three-dimensional structure.

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RNA expression by cell type

Percentage of cells with detected KDR RNA in the public colon adenocarcinoma cell groups.

Endothelial cells40.6%
Adipocytes2.0%
Natural killer cells0.5%
Tumor cells0.3%
Regulatory T cells0.3%
Fibroblasts0.3%
CD4 T cells0.2%
CD8 T cells0.2%
Macrophages (group B)0.2%
B cells0.2%
Dendritic cells0.0%
Granulocytes0.0%
Macrophages (group A)0.0%
RNA detection · Cancer Surfaceome Atlas, Table S6, row 35. Source study · Measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000128052
UniProt accession
P35968
Sequence state
available
Canonical sequence
Yes
Length in amino acids
1356
Sequence SHA-256
fc7e217443f8e66fc4af3971109e40c570f998fb293d1bf4f799cffcc127e76b
View and select the full canonical sequence
Sequence positions 1–1356

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–19
1–19
Membrane-spanning segments
765–785: Helical
765–785 (Helical)
Source-annotated domains
20–764: Extracellular786–1356: Cytoplasmic
20–764 (Extracellular); 786–1356 (Cytoplasmic)
Source-annotated extracellular intervals
20–764
20–764

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
20764745
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
880e1105fd27d9a7ee3ccbe8d1955f1b9c8eea93826f08e55ea01d605e3f03f0
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

Download source snapshot

Open sequence source
Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
P35968

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subcellular_location
SUBCELLULAR LOCATION: Cell junction {ECO:0000250}. Endoplasmic reticulum {ECO:0000269|PubMed:23529610}. Cell membrane {ECO:0000269|PubMed:25825981}. Note=Localized with RAP1A at cell-cell junctions (By similarity). Colocalizes with ERN1 and XBP1 in the endoplasmic reticulum in endothelial cells in a vascular endothelial growth factor (VEGF)-dependent manner (PubMed:23529610). {ECO:0000250, ECO:0000269|PubMed:23529610}.; SUBCELLULAR LOCATION: [Isoform 1]: Cell membrane; Single-pass type I membrane protein. Cytoplasm. Nucleus. Cytoplasmic vesicle. Early endosome. Note=Detected on caveolae-enriched lipid rafts at the cell surface. Is recycled from the plasma membrane to endosomes and back again. Phosphorylation triggered by VEGFA binding promotes internalization and subsequent degradation. VEGFA binding triggers internalization and translocation to the nucleus.; SUBCELLULAR LOCATION: [Isoform 2]: Secreted {ECO:0000305}.; SUBCELLULAR LOCATION: [Isoform 3]: Secreted.
transmembrane
TRANSMEM 765..785; /note="Helical"; /evidence="ECO:0000255"
topological_domain
TOPO_DOM 20..764; /note="Extracellular"; /evidence="ECO:0000255"; TOPO_DOM 786..1356; /note="Cytoplasmic"; /evidence="ECO:0000255"
signal_peptide
SIGNAL 1..19; /evidence="ECO:0000255"
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
Vascular endothelial growth factor receptor 2
Protein location
Transmembrane protein
Canonical sequence
P35968 · 1,356 amino acids
Extracellular region
UniProt annotates extracellular residues 20–764.

Expression in normal tissues

RNA specificity
Low tissue specificity
RNA distribution
Detected in many
Protein specificity
Tissue enriched
Protein distribution
Detected in single
Immunohistochemistry reliability
Enhanced
Immunofluorescence reliability
Approved
Protein tissue-specific intensity
heart muscle: 3,037,579.7
Tissue cell-type enrichment
Adipose subcutaneous - Endothelial cells, Adrenal gland - Endothelial cells, Breast - Endothelial cells, Colon - Endothelial cells, Heart muscle - Endothelial cells, Liver - Sinusoid Endothelial cells, Minor Salivary Gland - Endothelial cells, Skeletal muscle - Endothelial cells, Stomach - Endothelial cells
Subcellular location
Vesicles

Structures

A predicted target model is available.

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Sources and downloads

KDR · ENSG00000128052 · P35968

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