Surface AtlasMucinous colon cancer

NRP1

Neuropilin-1. UniProt annotates extracellular residues 22–856.

Sequence and protein regions

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RNA expression by cell type

Percentage of cells with detected NRP1 RNA in the public colon adenocarcinoma cell groups.

Endothelial cells49.9%
Macrophages (group B)42.1%
Fibroblasts25.1%
Adipocytes17.8%
Dendritic cells13.1%
Macrophages (group A)7.1%
Tumor cells2.5%
Granulocytes1.5%
Regulatory T cells0.6%
CD4 T cells0.4%
CD8 T cells0.4%
B cells0.3%
Natural killer cells0.2%
RNA detection · Cancer Surfaceome Atlas, Table S6, row 208. Source study · Measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000099250
UniProt accession
O14786
Sequence state
available
Canonical sequence
Yes
Length in amino acids
923
Sequence SHA-256
1d2551ade453a33a915755fda9144bb4924af48001cae8fe701fa2663318092c
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Sequence positions 1–923

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–21
1–21
Membrane-spanning segments
857–879: Helical
857–879 (Helical)
Source-annotated domains
22–856: Extracellular880–923: Cytoplasmic
22–856 (Extracellular); 880–923 (Cytoplasmic)
Source-annotated extracellular intervals
22–856
22–856

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
22856835
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
69ad0040abcdea3cda3ce57e5f1b2b38065bc5f1c44c6b06f25cf2a5127eb18a
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

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Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
O14786

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subcellular_location
SUBCELLULAR LOCATION: [Isoform 2]: Secreted {ECO:0000269|PubMed:10688880}.; SUBCELLULAR LOCATION: Mitochondrion membrane {ECO:0000305|PubMed:30623799}; Single-pass type I membrane protein {ECO:0000255}. Cell membrane {ECO:0000269|PubMed:30623799}; Single-pass type I membrane protein {ECO:0000255}. Cytoplasm {ECO:0000269|PubMed:30623799}.; SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:34742300}. Note=(Microbial infection) Proteolytically cleaved at the cell membrane upon H.pylori infection. {ECO:0000269|PubMed:34742300}.
transmembrane
TRANSMEM 857..879; /note="Helical"; /evidence="ECO:0000255"
topological_domain
TOPO_DOM 22..856; /note="Extracellular"; /evidence="ECO:0000255"; TOPO_DOM 880..923; /note="Cytoplasmic"; /evidence="ECO:0000255"
signal_peptide
SIGNAL 1..21; /evidence="ECO:0000269|PubMed:10688880, ECO:0000269|PubMed:9529250"
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
Neuropilin-1
Protein location
Transmembrane protein
Canonical sequence
O14786 · 923 amino acids
Extracellular region
UniProt annotates extracellular residues 22–856.

Expression in normal tissues

RNA specificity
Low tissue specificity
RNA distribution
Detected in all
Protein specificity
Group enriched
Protein distribution
Detected in all
Immunohistochemistry reliability
Approved
Immunofluorescence reliability
Uncertain
Protein tissue-specific intensity
heart muscle: 3,475,461.4; skeletal muscle: 13,871,393.6
Tissue cell-type enrichment
Adipose subcutaneous - Endothelial cells, Adipose visceral - Endothelial cells, Adrenal gland - Fibroblasts, Breast - Endothelial cells, Prostate - Endothelial cells, Skeletal muscle - Fibroblasts
Subcellular location
Mitochondria

Sources and downloads

NRP1 · ENSG00000099250 · O14786

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