Surface AtlasMucinous colon cancer

TNFRSF4

Tumor necrosis factor receptor superfamily member 4. UniProt annotates extracellular residues 29–214.

Sequence and protein regions

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RNA expression by cell type

Percentage of cells with detected TNFRSF4 RNA in the public colon adenocarcinoma cell groups.

Regulatory T cells48.3%
Endothelial cells28.8%
CD4 T cells20.0%
B cells12.0%
Granulocytes11.8%
Dendritic cells9.2%
Natural killer cells6.4%
Macrophages (group B)6.1%
Macrophages (group A)3.7%
Fibroblasts2.9%
CD8 T cells2.5%
Adipocytes2.2%
Tumor cells2.1%
RNA detection · Cancer Surfaceome Atlas, Table S6, row 164. Source study · Measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000186827
UniProt accession
P43489
Sequence state
available
Canonical sequence
Yes
Length in amino acids
277
Sequence SHA-256
961acc71fe9b1ba77818a9ff4ffc482d025282f51ac07b592ad4ddeadfc2d60e
View and select the full canonical sequence
Sequence positions 1–277

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–28
1–28
Membrane-spanning segments
215–235: Helical
215–235 (Helical)
Source-annotated domains
29–214: Extracellular236–277: Cytoplasmic
29–214 (Extracellular); 236–277 (Cytoplasmic)
Source-annotated extracellular intervals
29–214
29–214

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
29214186
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
6eba8152a09aec42bf4883842dabf67b898bf0126edd01ac8a65820433dd00b6
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

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Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
P43489

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subcellular_location
SUBCELLULAR LOCATION: Membrane; Single-pass type I membrane protein.
transmembrane
TRANSMEM 215..235; /note="Helical"; /evidence="ECO:0000255"
topological_domain
TOPO_DOM 29..214; /note="Extracellular"; /evidence="ECO:0000255"; TOPO_DOM 236..277; /note="Cytoplasmic"; /evidence="ECO:0000255"
signal_peptide
SIGNAL 1..28; /evidence="ECO:0000255"
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
Tumor necrosis factor receptor superfamily member 4
Protein location
Transmembrane protein
Canonical sequence
P43489 · 277 amino acids
Extracellular region
UniProt annotates extracellular residues 29–214.

Expression in normal tissues

RNA specificity
Tissue enhanced
RNA distribution
Detected in many
RNA tissue-specific nTPM
adipose tissue: 9.6; heart muscle: 10.4; lymphoid tissue: 12.7
Protein specificity
Not detected
Protein distribution
Not detected
Immunohistochemistry reliability
Enhanced
Tissue cell-type enrichment
Minor Salivary Gland - Plasma cells

Sources and downloads

TNFRSF4 · ENSG00000186827 · P43489

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