Surface AtlasMucinous colon cancer

TPBG

Trophoblast glycoprotein. UniProt annotates extracellular residues 32–355.

Predicted protein structure

A downloaded AlphaFold model connects the TPBG sequence to its predicted three-dimensional structure.

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RNA expression by cell type

Percentage of cells with detected TPBG RNA in the public colon adenocarcinoma cell groups.

Fibroblasts30.1%
Endothelial cells13.8%
Tumor cells9.3%
Adipocytes8.9%
Macrophages (group B)1.8%
Macrophages (group A)0.9%
CD4 T cells0.9%
Dendritic cells0.7%
Granulocytes0.5%
CD8 T cells0.3%
B cells0.3%
Regulatory T cells0.3%
Natural killer cells0.0%
RNA detection · Cancer Surfaceome Atlas, Table S6, row 665. Source study · Measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000146242
UniProt accession
Q13641
Sequence state
available
Canonical sequence
Yes
Length in amino acids
420
Sequence SHA-256
51681f2cee5b5729bdc190698020665dfc2e9e327a0f5ada6907865092d8e114
View and select the full canonical sequence
Sequence positions 1–420

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–31
1–31
Membrane-spanning segments
356–376: Helical
356–376 (Helical)
Source-annotated domains
32–355: Extracellular377–420: Cytoplasmic
32–355 (Extracellular); 377–420 (Cytoplasmic)
Source-annotated extracellular intervals
32–355
32–355

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
32355324
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
bd19613343b2c8e870d82f6d55cc0d34539d5dd7a4e5e30faf0ef571147274a5
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

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Open sequence source
Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
Q13641

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subcellular_location
SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:24582434}; Single-pass type I membrane protein {ECO:0000269|PubMed:24582434}.
transmembrane
TRANSMEM 356..376; /note="Helical"; /evidence="ECO:0000255"
topological_domain
TOPO_DOM 32..355; /note="Extracellular"; /evidence="ECO:0000255"; TOPO_DOM 377..420; /note="Cytoplasmic"; /evidence="ECO:0000255"
signal_peptide
SIGNAL 1..31; /evidence="ECO:0000255"
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
Trophoblast glycoprotein
Protein location
Transmembrane protein
Canonical sequence
Q13641 · 420 amino acids
Extracellular region
UniProt annotates extracellular residues 32–355.

Expression in normal tissues

RNA specificity
Low tissue specificity
RNA distribution
Detected in many
Protein specificity
Tissue enriched
Protein distribution
Detected in many
Immunohistochemistry reliability
Enhanced
Immunofluorescence reliability
Approved
Protein tissue-specific intensity
intestine: 23,141,939.1
Tissue cell-type enrichment
Adrenal gland - Fibroblasts, Breast - Breast glandular cells, Heart muscle - Fibroblasts, Lung - Fibroblasts_2
Subcellular location
Nucleoplasm

Structures

A predicted target model is available.

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Sources and downloads

TPBG · ENSG00000146242 · Q13641

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