Surface AtlasMucinous colon cancer

FASLG

Tumor necrosis factor ligand superfamily member 6. UniProt annotates extracellular residues 103–281.

Sequence and protein regions

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RNA expression in tumor samples

Median FASLG RNA expression by tumor type, measured in RSEM units. The study selected these samples using microsatellite-stability score thresholds.

Mucinous tumors37 samples4.7
Other tumor types438 samples7.3
Compare the sample groups · cBioPortal measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000117560
UniProt accession
P48023
Sequence state
available
Canonical sequence
Yes
Length in amino acids
281
Sequence SHA-256
53a6da74b7f56161c0ca6ecefc9966b7566ee3b75ef1afa0dd752d168b8d4ea0
View and select the full canonical sequence
Sequence positions 1–281

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Membrane-spanning segments
81–102: Helical; Signal-anchor for type II membrane protein
81–102 (Helical; Signal-anchor for type II membrane protein)
Source-annotated domains
1–80: Cytoplasmic103–281: Extracellular
1–80 (Cytoplasmic); 103–281 (Extracellular)
Source-annotated extracellular intervals
103–281
103–281

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
103281179
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
9ec3f4faa6bccc6f8ac3e188ead7f29ed9808aeeff7eb9b2b9c87e41fbe60bb5
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

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Open sequence source
Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
P48023

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subcellular_location
SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:17557115, ECO:0000269|PubMed:9427603}; Single-pass type II membrane protein {ECO:0000255}. Cytoplasmic vesicle lumen {ECO:0000269|PubMed:17164290}. Lysosome lumen {ECO:0000269|PubMed:17164290}. Note=Is internalized into multivesicular bodies of secretory lysosomes after phosphorylation by FGR and monoubiquitination (PubMed:17164290). Colocalizes with the SPPL2A protease at the cell membrane (PubMed:17557115). {ECO:0000269|PubMed:17164290, ECO:0000269|PubMed:17557115}.; SUBCELLULAR LOCATION: [Tumor necrosis factor ligand superfamily member 6, soluble form]: Secreted {ECO:0000269|PubMed:9427603}. Note=May be released into the extracellular fluid by cleavage from the cell surface. {ECO:0000269|PubMed:9427603}.; SUBCELLULAR LOCATION: [FasL intracellular domain]: Nucleus {ECO:0000269|PubMed:17557115}. Note=The FasL ICD cytoplasmic form is translocated into the nucleus. {ECO:0000269|PubMed:17557115}.
transmembrane
TRANSMEM 81..102; /note="Helical; Signal-anchor for type II membrane protein"; /evidence="ECO:0000255"
topological_domain
TOPO_DOM 1..80; /note="Cytoplasmic"; /evidence="ECO:0000255"; TOPO_DOM 103..281; /note="Extracellular"; /evidence="ECO:0000255"
signal_peptide
Not recorded
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
Tumor necrosis factor ligand superfamily member 6
Protein location
Transmembrane protein
Canonical sequence
P48023 · 281 amino acids
Extracellular region
UniProt annotates extracellular residues 103–281.

Expression in normal tissues

RNA specificity
Tissue enhanced
RNA distribution
Detected in some
RNA tissue-specific nTPM
lymphoid tissue: 5.3
Protein specificity
Not detected
Protein distribution
Not detected
Immunohistochemistry reliability
Approved
Tissue cell-type enrichment
Adipose subcutaneous - T-cells, Adipose visceral - T-cells, Adrenal gland - T-cells, Breast - T-cells, Heart muscle - T-cells, Kidney - T-cells, Liver - NK-cells (Liver), Minor Salivary Gland - T-cells, Pituitary gland - T-cells, Prostate - T-cells, Spleen - T-cells, Stomach - T-cells, Thyroid gland - T-cells

Sources and downloads

FASLG · ENSG00000117560 · P48023

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