Surface AtlasMucinous colon cancer

LY6G6D

Lymphocyte antigen 6 complex locus protein G6d. An extracellular span at residues 20–103 is derived from the signal peptide and GPI attachment annotation.

Sequence and protein regions

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RNA expression in tumor samples

Median LY6G6D RNA expression by tumor type, measured in RSEM units. The study selected these samples using microsatellite-stability score thresholds.

Mucinous tumors37 samples10.6
Other tumor types438 samples300.6
Compare the sample groups · cBioPortal measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000244355
UniProt accession
O95868
Sequence state
available
Canonical sequence
Yes
Length in amino acids
133
Sequence SHA-256
b8a20c41b1334b48eecaf80fb3d3781edeaa8088695a1b3546ee5e250a6b2a27
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Sequence positions 1–133

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–19
1–19
Lipid attachment sites
104–104: GPI-anchor amidated serine
104–104 (GPI-anchor amidated serine)
Derived extracellular interval
20–103
20–103

The extracellular interval is derived from the signal peptide and GPI attachment site. It is a proposed construct interval.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
2010384
Sequence and source
Basis
interval-after-reviewed-signal-before-reviewed-gpi-anchor
Evidence class
topology-derived-construct-hypothesis
Sequence SHA-256
7c67833f69b596f9c086fed1ce150162deca18e565ae35aa8cbe316c4690daeb
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

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Open sequence source
Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
O95868

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subcellular_location
SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:17008713}; Lipid-anchor, GPI-anchor {ECO:0000269|PubMed:17008713}. Cell projection, filopodium {ECO:0000269|PubMed:17008713}.
transmembrane
Not recorded
topological_domain
Not recorded
signal_peptide
SIGNAL 1..19; /evidence="ECO:0000255"
lipidation
LIPID 104; /note="GPI-anchor amidated serine"; /evidence="ECO:0000255"

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
Lymphocyte antigen 6 complex locus protein G6d
Protein location
GPI-anchored membrane protein
Canonical sequence
O95868 · 133 amino acids
Extracellular region
An extracellular span at residues 20–103 is derived from the signal peptide and GPI attachment annotation.

Expression in normal tissues

RNA specificity
Tissue enriched
RNA distribution
Detected in some
RNA tissue-specific nTPM
skin 1: 33.5
Protein specificity
Not detected
Protein distribution
Not detected
Immunohistochemistry reliability
Uncertain
Tissue cell-type enrichment
Pituitary gland - Undifferentiated cells (Pituitary gland), Skin - Hair cortex cells, Skin - Inner root sheath cells, Testis - Early spermatids, Testis - Late spermatids

Sources and downloads

LY6G6D · ENSG00000244355 · O95868

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