Surface AtlasMucinous colon cancer

NECTIN4

Nectin-4. UniProt annotates extracellular residues 32–349.

Sequence and protein regions

Explore the NECTIN4 sequence, select annotated regions, and copy a request to continue in Codex.

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RNA expression in tumor samples

Median NECTIN4 RNA expression by tumor type, measured in RSEM units. The study selected these samples using microsatellite-stability score thresholds.

Mucinous tumors37 samples451.4
Other tumor types438 samples303.4
Compare the sample groups · cBioPortal measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-NECTIN4
UniProt accession
Q96NY8
Sequence state
available
Canonical sequence
Yes
Length in amino acids
510
Sequence SHA-256
47dae33285446c4aba143bab37177a3613fd5469c2e26c63c55b73512ce0b218
View and select the full canonical sequence
Sequence positions 1–510

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–31
1–31
Membrane-spanning segments
350–370: Helical
350–370 (Helical)
Source-annotated domains
32–349: Extracellular371–510: Cytoplasmic
32–349 (Extracellular); 371–510 (Cytoplasmic)
Source-annotated extracellular intervals
32–349
32–349

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
32349318
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
e1b064fb36603a71d861aa80e94ca3df488d309e43c20c86180a888b9963955a
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

Download source snapshot

Open sequence source
Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
Q96NY8

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subcellular_location
SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Single-pass type I membrane protein {ECO:0000305}. Cell junction, adherens junction {ECO:0000269|PubMed:11544254}. Note=Colocalizes with AFDN at cadherin-based adherens junctions (PubMed:11544254).; SUBCELLULAR LOCATION: [Processed poliovirus receptor-related protein 4]: Secreted {ECO:0000269|PubMed:15784625}. Note=The secreted form is found in breast tumor patients (PubMed:15784625).
transmembrane
TRANSMEM 350..370; /note="Helical"; /evidence="ECO:0000255"
topological_domain
TOPO_DOM 32..349; /note="Extracellular"; /evidence="ECO:0000255"; TOPO_DOM 371..510; /note="Cytoplasmic"; /evidence="ECO:0000255"
signal_peptide
SIGNAL 1..31; /evidence="ECO:0000255"
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
Nectin-4
Protein location
Transmembrane protein
Canonical sequence
Q96NY8 · 510 amino acids
Extracellular region
UniProt annotates extracellular residues 32–349.

Expression in normal tissues

Unresolved reason
missing Ensembl gene id
Source error code
missing-ensembl-gene-id

Sources and downloads

NECTIN4 · Q96NY8

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