Surface AtlasMucinous colon cancer

RET

Proto-oncogene tyrosine-protein kinase receptor Ret. UniProt annotates extracellular residues 29–635.

Sequence and protein regions

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RNA expression in tumor samples

Median RET RNA expression by tumor type, measured in RSEM units. The study selected these samples using microsatellite-stability score thresholds.

Mucinous tumors37 samples35.4
Other tumor types438 samples19.7
Compare the sample groups · cBioPortal measurements (JSON)

Sequence & binding sites

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Sequence annotations and source records

Canonical sequence and topology

Target ID
T-ENSG00000165731
UniProt accession
P07949
Sequence state
available
Canonical sequence
Yes
Length in amino acids
1114
Sequence SHA-256
10ec8a9e8316e42cd33c02e147ccc5d057ce4ecac76498c455a230ec4485d6be
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Sequence positions 1–1114

Gray shows the full canonical sequence. Colored spans mark the listed intervals.

Signal peptide
1–28
1–28
Membrane-spanning segments
636–657: Helical
636–657 (Helical)
Source-annotated domains
29–635: Extracellular658–1114: Cytoplasmic
29–635 (Extracellular); 658–1114 (Cytoplasmic)
Source-annotated extracellular intervals
29–635
29–635

UniProt annotates the following extracellular intervals.

One-based positions include both interval endpoints.
StartEndLengthSequence and source
29635607
Sequence and source
Basis
reviewed-uniprot-topological-domain
Evidence class
source-annotated-topology
Sequence SHA-256
76695c89bbdf2e12a0f3ff15370c2e6b59d935cfa7a70bbcf56d293ffd2ec1be
Sequence and topology sources
Source role
canonical-sequence
Source
alphafold-db-canonical-uniprot-field
Extracted field
uniprotSequence
Source row accession
Not recorded

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Source role
reviewed-topology
Source
UniProt reviewed human surface-field snapshot
Extracted field
Not recorded
Source row accession
P07949

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subcellular_location
SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:19823924, ECO:0000269|PubMed:21994944, ECO:0000269|PubMed:23333276, ECO:0000269|PubMed:28953886, ECO:0000269|PubMed:9575150}; Single-pass type I membrane protein {ECO:0000269|PubMed:19823924}. Endosome membrane {ECO:0000269|PubMed:19823924, ECO:0000269|PubMed:23333276}; Single-pass type I membrane protein {ECO:0000269|PubMed:19823924}. Note=Predominantly located on the plasma membrane (PubMed:23333276, PubMed:9575150). In the presence of SORL1 and GFRA1, directed to endosomes (PubMed:23333276). {ECO:0000269|PubMed:23333276, ECO:0000269|PubMed:9575150}.
transmembrane
TRANSMEM 636..657; /note="Helical"; /evidence="ECO:0000255"
topological_domain
TOPO_DOM 29..635; /note="Extracellular"; /evidence="ECO:0000255"; TOPO_DOM 658..1114; /note="Cytoplasmic"; /evidence="ECO:0000255"
signal_peptide
SIGNAL 1..28; /evidence="ECO:0000255"
lipidation
Not recorded

Download all canonical target sequences (FASTA)

Protein identity and location

Protein
Proto-oncogene tyrosine-protein kinase receptor Ret
Protein location
Transmembrane protein
Canonical sequence
P07949 · 1,114 amino acids
Extracellular region
UniProt annotates extracellular residues 29–635.

Expression in normal tissues

RNA specificity
Tissue enhanced
RNA distribution
Detected in many
RNA tissue-specific nTPM
adrenal gland: 10.9; parathyroid gland: 18.7
Protein specificity
Tissue enriched
Protein distribution
Detected in single
Immunohistochemistry reliability
Approved
Immunofluorescence reliability
Approved
Protein tissue-specific intensity
blood vessel: 449,739.4
Tissue cell-type enrichment
Adrenal gland - Adrenal medulla cells, Colon - Colon enteroendocrine cells, Pituitary gland - Corticotropes, Testis - Spermatogonia
Subcellular location
Golgi apparatus, Cytosol

Sources and downloads

RET · ENSG00000165731 · P07949

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